TomoSeq data search

Data search

Results for MligTC455_32114

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32114	198	4.12	Mlig455_018388	Neo: - Age: - Region-enriched R6: 3.449/0.00727 Region-enriched R5: 3.116/0.00255	RNF19B	Mlig455_018388 {REF} {Length: 4833} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=73.4]; zinc-RING finger domain [PF14634.8, score=19.3]} {Human: ENSG00000116514, RNF19B, ring finger protein 19B, [RH, Score=411, Expect=4e-130]; ENSG00000034677, RNF19A, ring finger protein 19A, RBR E3 ubiquitin protein ligase, [RH, Score=410, Expect=2e-128]} {Mouse: ENSMUSG00000022280, Rnf19a, ring finger protein 19A, [RH, Score=409, Expect=2e-128]; ENSMUSG00000028793, Rnf19b, ring finger protein 19B, [RH, Score=407, Expect=6e-129]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=93.6, Expect=2e-19]} {Celegans: WBGene00015926, C17H11.6, [RH, Score=390, Expect=1e-120]} {Smed: dd_Smed_v6_4771_0_1, dd_Smed_v6_4771_0_1, [RH, Score=218, Expect=5e-60]} {RNA1509_20153} {RNA1310_8778} {RNA815_22153}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32114

198

4.12

Mlig455_018388

Neo: -

Age: -

Region-enriched R6: 3.449/0.00727
Region-enriched R5: 3.116/0.00255

RNF19B

Mlig455_018388 {REF} {Length: 4833} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=73.4]; zinc-RING finger domain [PF14634.8, score=19.3]} {Human: ENSG00000116514, RNF19B, ring finger protein 19B, [RH, Score=411, Expect=4e-130]; ENSG00000034677, RNF19A, ring finger protein 19A, RBR E3 ubiquitin protein ligase, [RH, Score=410, Expect=2e-128]} {Mouse: ENSMUSG00000022280, Rnf19a, ring finger protein 19A, [RH, Score=409, Expect=2e-128]; ENSMUSG00000028793, Rnf19b, ring finger protein 19B, [RH, Score=407, Expect=6e-129]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=93.6, Expect=2e-19]} {Celegans: WBGene00015926, C17H11.6, [RH, Score=390, Expect=1e-120]} {Smed: dd_Smed_v6_4771_0_1, dd_Smed_v6_4771_0_1, [RH, Score=218, Expect=5e-60]} {RNA1509_20153} {RNA1310_8778} {RNA815_22153}

Cumulative graph for MligTC455_32114

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-8.195	2.726	1.00000	1.00000
RegionR2	1.807	2.726	0.15279	0.48859
RegionR3	2.599	2.726	0.00886	0.14147
RegionR4	1.302	2.726	0.22954	0.52214
RegionR5	3.116	2.726	0.00017	0.00255
RegionR6	3.449	2.726	0.00009	0.00727
RegionR7	1.93	2.726	0.08656	0.56580
RegionR8	-6.008	2.726	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.146	2.726	1.00000	1.00000
RegenerationR2	1.038	2.726	0.08965	0.47885
RegenerationR3	-0.112	2.726	0.86783	1.00000
RegenerationR4	1.077	2.726	0.13767	0.55827
RegenerationR5	0.458	2.726	0.41545	0.80869
RegenerationR6	-0.48	2.726	0.46540	0.78163
RegenerationBL	0.346	2.726	0.71361	1.00000
RegenerationTP	3.073	2.726	0.10035	0.49288

Genes with expression patterns similar to MligTC455_32114

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32114	198	4.12	Mlig455_018388	Neo: - Age: - Region-enriched R6: 3.449/0.00727 Region-enriched R5: 3.116/0.00255	RNF19B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018388 {REF} {Length: 4833} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=73.4]; zinc-RING finger domain [PF14634.8, score=19.3]} {Human: ENSG00000116514, RNF19B, ring finger protein 19B, [RH, Score=411, Expect=4e-130]; ENSG00000034677, RNF19A, ring finger protein 19A, RBR E3 ubiquitin protein ligase, [RH, Score=410, Expect=2e-128]} {Mouse: ENSMUSG00000022280, Rnf19a, ring finger protein 19A, [RH, Score=409, Expect=2e-128]; ENSMUSG00000028793, Rnf19b, ring finger protein 19B, [RH, Score=407, Expect=6e-129]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=93.6, Expect=2e-19]} {Celegans: WBGene00015926, C17H11.6, [RH, Score=390, Expect=1e-120]} {Smed: dd_Smed_v6_4771_0_1, dd_Smed_v6_4771_0_1, [RH, Score=218, Expect=5e-60]} {RNA1509_20153} {RNA1310_8778} {RNA815_22153}
2.	MligTC455_43219	830	17.3	Mlig455_017107	Neo: - Age: logFC(26M/2M)=-0.451	SPEF2	1.686	-	-	0.712	0.974	-	-	Mlig455_017107 {REF} {Length: 6732} {Pfam: CH-like domain in sperm protein [PF06294.13, score=77.3]; Adenylate kinase [PF00406.24, score=43.9]} {Human: ENSG00000152582, SPEF2, sperm flagellar 2, [RH, Score=700, Expect=0.0]} {Mouse: ENSMUSG00000072663, Spef2, sperm flagellar 2, [RH, Score=584, Expect=6e-174]} {Dmel: FBgn0283494, Adk2, Adenylate kinase 2, [Score=70.9, Expect=8e-13]} {Celegans: WBGene00002879, let-754, Adenylate kinase, [Score=66.2, Expect=2e-11]} {Smed: dd_Smed_v6_9419_0_1, dd_Smed_v6_9419_0_1, [RH, Score=647, Expect=0.0]} {RNA1509_3439} {RNA1310_517.1, RNA1509_3439} {RNA1509_3439, RNA815_5241}
3.	MligTC455_33592	733	15.26	Mlig455_046721, Mlig455_046839, Mlig455_046845	Neo: - Age: -	AP5Z1	0.955	-	-	-	0.955	-	-	Mlig455_046721 {REF} {Length: 3337} {TRANSSPLICED} {Pfam: AP-5 complex subunit, vesicle trafficking [PF14764.8, score=46.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.0]} {Human: ENSG00000242802, AP5Z1, adaptor related protein complex 5 subunit zeta 1, [RH, Score=82.0, Expect=2e-15]} {Mouse: ENSMUSG00000039623, Ap5z1, adaptor-related protein complex 5, zeta 1 subunit, [RH, Score=108, Expect=1e-23]} {RNA1509_19854} {RNA1310_6259} {RNA815_22997} Mlig455_046839 {REF} {Length: 3337} {TRANSSPLICED} {Pfam: AP-5 complex subunit, vesicle trafficking [PF14764.8, score=46.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.0]} {Human: ENSG00000242802, AP5Z1, adaptor related protein complex 5 subunit zeta 1, [RH, Score=82.0, Expect=2e-15]} {Mouse: ENSMUSG00000039623, Ap5z1, adaptor-related protein complex 5, zeta 1 subunit, [RH, Score=108, Expect=1e-23]} {RNA1509_19854} {RNA1310_6259, RNA1509_19854} {RNA1509_19854, RNA815_22997} Mlig455_046845 {REF} {Length: 4424} {Pfam: AP-5 complex subunit, vesicle trafficking [PF14764.8, score=48.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.3]} {Human: ENSG00000242802, AP5Z1, adaptor related protein complex 5 subunit zeta 1, [RH, Score=82.4, Expect=1e-15]} {Mouse: ENSMUSG00000039623, Ap5z1, adaptor-related protein complex 5, zeta 1 subunit, [RH, Score=104, Expect=2e-22]} {RNA1509_19854} {RNA1310_6259} {RNA815_22997}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_32114

198

4.12

Mlig455_018388

Neo: -

Age: -

Region-enriched R6: 3.449/0.00727
Region-enriched R5: 3.116/0.00255

RNF19B

1.000

MligTC455_43219

830

17.3

Mlig455_017107

Neo: -

Age: logFC(26M/2M)=-0.451

SPEF2

1.686

0.712

0.974

Mlig455_017107 {REF} {Length: 6732} {Pfam: CH-like domain in sperm protein [PF06294.13, score=77.3]; Adenylate kinase [PF00406.24, score=43.9]} {Human: ENSG00000152582, SPEF2, sperm flagellar 2, [RH, Score=700, Expect=0.0]} {Mouse: ENSMUSG00000072663, Spef2, sperm flagellar 2, [RH, Score=584, Expect=6e-174]} {Dmel: FBgn0283494, Adk2, Adenylate kinase 2, [Score=70.9, Expect=8e-13]} {Celegans: WBGene00002879, let-754, Adenylate kinase, [Score=66.2, Expect=2e-11]} {Smed: dd_Smed_v6_9419_0_1, dd_Smed_v6_9419_0_1, [RH, Score=647, Expect=0.0]} {RNA1509_3439} {RNA1310_517.1, RNA1509_3439} {RNA1509_3439, RNA815_5241}

MligTC455_33592

733

15.26

Mlig455_046721, Mlig455_046839, Mlig455_046845

Neo: -

Age: -

AP5Z1

0.955

Mlig455_046721 {REF} {Length: 3337} {TRANSSPLICED} {Pfam: AP-5 complex subunit, vesicle trafficking [PF14764.8, score=46.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.0]} {Human: ENSG00000242802, AP5Z1, adaptor related protein complex 5 subunit zeta 1, [RH, Score=82.0, Expect=2e-15]} {Mouse: ENSMUSG00000039623, Ap5z1, adaptor-related protein complex 5, zeta 1 subunit, [RH, Score=108, Expect=1e-23]} {RNA1509_19854} {RNA1310_6259} {RNA815_22997}

Mlig455_046839 {REF} {Length: 3337} {TRANSSPLICED} {Pfam: AP-5 complex subunit, vesicle trafficking [PF14764.8, score=46.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.0]} {Human: ENSG00000242802, AP5Z1, adaptor related protein complex 5 subunit zeta 1, [RH, Score=82.0, Expect=2e-15]} {Mouse: ENSMUSG00000039623, Ap5z1, adaptor-related protein complex 5, zeta 1 subunit, [RH, Score=108, Expect=1e-23]} {RNA1509_19854} {RNA1310_6259, RNA1509_19854} {RNA1509_19854, RNA815_22997}

Mlig455_046845 {REF} {Length: 4424} {Pfam: AP-5 complex subunit, vesicle trafficking [PF14764.8, score=48.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.3]} {Human: ENSG00000242802, AP5Z1, adaptor related protein complex 5 subunit zeta 1, [RH, Score=82.4, Expect=1e-15]} {Mouse: ENSMUSG00000039623, Ap5z1, adaptor-related protein complex 5, zeta 1 subunit, [RH, Score=104, Expect=2e-22]} {RNA1509_19854} {RNA1310_6259} {RNA815_22997}