TomoSeq data search

Data search

Results for MligTC455_32200

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32200	658	13.72	Mlig455_051611	Neo: - Age: - Region-enriched R4: 1.571/0.01653	SURF1	Mlig455_051611 {REF} {Length: 1091} {TRANSSPLICED} {Pfam: SURF1 family [PF02104.17, score=148.7]} {Human: ENSG00000280627, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=164, Expect=4e-48]; ENSG00000148290, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=164, Expect=4e-48]} {Mouse: ENSMUSG00000015790, Surf1, surfeit gene 1, [RH, Score=169, Expect=6e-50]} {Dmel: FBgn0029117, Surf1, Surfeit 1, [RH, Score=166, Expect=3e-49]} {Celegans: WBGene00004787, sft-1, SURF1-like protein, [RH, Score=153, Expect=6e-44]} {Smed: dd_Smed_v6_8214_0_1, dd_Smed_v6_8214_0_1, [RH, Score=143, Expect=8e-41]} {RNA1509_48949} {RNA1310_30329, RNA1509_48949} {RNA1509_48949, RNA815_15368.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32200

658

13.72

Mlig455_051611

Neo: -

Age: -

Region-enriched R4: 1.571/0.01653

SURF1

Mlig455_051611 {REF} {Length: 1091} {TRANSSPLICED} {Pfam: SURF1 family [PF02104.17, score=148.7]} {Human: ENSG00000280627, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=164, Expect=4e-48]; ENSG00000148290, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=164, Expect=4e-48]} {Mouse: ENSMUSG00000015790, Surf1, surfeit gene 1, [RH, Score=169, Expect=6e-50]} {Dmel: FBgn0029117, Surf1, Surfeit 1, [RH, Score=166, Expect=3e-49]} {Celegans: WBGene00004787, sft-1, SURF1-like protein, [RH, Score=153, Expect=6e-44]} {Smed: dd_Smed_v6_8214_0_1, dd_Smed_v6_8214_0_1, [RH, Score=143, Expect=8e-41]} {RNA1509_48949} {RNA1310_30329, RNA1509_48949} {RNA1509_48949, RNA815_15368.1}

Cumulative graph for MligTC455_32200

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.527	4.141	0.20534	0.84402
RegionR2	-0.437	4.141	0.44415	0.83296
RegionR3	0.14	4.141	0.76568	1.00000
RegionR4	1.571	4.141	0.00180	0.01653
RegionR5	1.042	4.141	0.01517	0.07891
RegionR6	0.099	4.141	0.83987	1.00000
RegionR7	-0.338	4.141	0.58142	1.00000
RegionR8	-0.55	4.141	0.47890	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.774	4.141	0.13451	0.86932
RegenerationR2	-0.095	4.141	0.84846	1.00000
RegenerationR3	-0.237	4.141	0.65055	0.92923
RegenerationR4	-0.702	4.141	0.18095	0.62112
RegenerationR5	-0.669	4.141	0.16823	0.59524
RegenerationR6	-0.253	4.141	0.64508	0.89603
RegenerationBL	0.101	4.141	0.86078	1.00000
RegenerationTP	0.545	4.141	0.38414	0.81835

Genes with expression patterns similar to MligTC455_32200

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32200	658	13.72	Mlig455_051611	Neo: - Age: - Region-enriched R4: 1.571/0.01653	SURF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_051611 {REF} {Length: 1091} {TRANSSPLICED} {Pfam: SURF1 family [PF02104.17, score=148.7]} {Human: ENSG00000280627, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=164, Expect=4e-48]; ENSG00000148290, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=164, Expect=4e-48]} {Mouse: ENSMUSG00000015790, Surf1, surfeit gene 1, [RH, Score=169, Expect=6e-50]} {Dmel: FBgn0029117, Surf1, Surfeit 1, [RH, Score=166, Expect=3e-49]} {Celegans: WBGene00004787, sft-1, SURF1-like protein, [RH, Score=153, Expect=6e-44]} {Smed: dd_Smed_v6_8214_0_1, dd_Smed_v6_8214_0_1, [RH, Score=143, Expect=8e-41]} {RNA1509_48949} {RNA1310_30329, RNA1509_48949} {RNA1509_48949, RNA815_15368.1}
2.	MligTC455_46421	410	8.54	Mlig455_008505	Neo: - Age: -	ZNF358	0.956	-	-	-	0.956	-	-	Mlig455_008505 {REF} {Length: 3584} {Pfam: C2H2-type zinc finger [PF13894.8, score=71.8]; Zinc finger, C2H2 type [PF00096.28, score=55.8]; Zinc-finger double domain [PF13465.8, score=34.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=25.7]} {Human: ENSG00000198816, ZNF358, zinc finger protein 358, [Score=105, Expect=1e-22]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=100, Expect=1e-20]} {Mouse: ENSMUSG00000075040, Zfp408, zinc finger protein 408, [Score=108, Expect=2e-23]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=104, Expect=2e-22]; ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=103, Expect=5e-22]} {Dmel: FBgn0020309, crol, crooked legs, [Score=104, Expect=2e-22]} {Celegans: WBGene00019751, M03D4.4, [Score=72.8, Expect=5e-13]} {Smed: dd_Smed_v6_9443_0_1, dd_Smed_v6_9443_0_1, [RH, Score=119, Expect=5e-27]} {RNA1509_12398} {RNA1310_10410, RNA1509_12398} {RNA1509_12398, RNA815_9727}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_32200

658

13.72

Mlig455_051611

Neo: -

Age: -

Region-enriched R4: 1.571/0.01653

SURF1

1.000

MligTC455_46421

410

8.54

Mlig455_008505

Neo: -

Age: -

ZNF358

0.956

Mlig455_008505 {REF} {Length: 3584} {Pfam: C2H2-type zinc finger [PF13894.8, score=71.8]; Zinc finger, C2H2 type [PF00096.28, score=55.8]; Zinc-finger double domain [PF13465.8, score=34.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=25.7]} {Human: ENSG00000198816, ZNF358, zinc finger protein 358, [Score=105, Expect=1e-22]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=100, Expect=1e-20]} {Mouse: ENSMUSG00000075040, Zfp408, zinc finger protein 408, [Score=108, Expect=2e-23]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=104, Expect=2e-22]; ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=103, Expect=5e-22]} {Dmel: FBgn0020309, crol, crooked legs, [Score=104, Expect=2e-22]} {Celegans: WBGene00019751, M03D4.4, [Score=72.8, Expect=5e-13]} {Smed: dd_Smed_v6_9443_0_1, dd_Smed_v6_9443_0_1, [RH, Score=119, Expect=5e-27]} {RNA1509_12398} {RNA1310_10410, RNA1509_12398} {RNA1509_12398, RNA815_9727}