Data search
Results for MligTC455_32203
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32203 | 701 | 14.60 | Mlig455_051586, Mlig455_051619 | Neo: - Age: logFC(26M/2M)=0.465 Region-enriched R5: 1.804/0.00120 |
GTF2H2C, SURF1 | Mlig455_051586 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: SURF1 family [PF02104.17, score=130.9]} {Human: ENSG00000280627, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=157, Expect=9e-45]; ENSG00000148290, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=157, Expect=9e-45]} {Mouse: ENSMUSG00000015790, Surf1, surfeit gene 1, [RH, Score=162, Expect=2e-46]} {Dmel: FBgn0029117, Surf1, Surfeit 1, [Score=152, Expect=4e-43]} {Celegans: WBGene00004787, sft-1, SURF1-like protein, [Score=138, Expect=2e-38]} {Smed: dd_Smed_v6_8214_0_1, dd_Smed_v6_8214_0_1, [Score=125, Expect=1e-33]} {RNA1509_19373} {RNA1310_19775} {RNA815_8031} Mlig455_051619 {REF} {Length: 1608} {TRANSSPLICED} {Pfam: Ssl1-like [PF04056.16, score=211.4]; von Willebrand factor type A domain [PF13519.8, score=35.9]; TFIIH C1-like domain [PF07975.14, score=33.0]} {Human: ENSG00000183474, GTF2H2C, GTF2H2 family member C, [RH, Score=306, Expect=1e-100]; ENSG00000274675, GTF2H2C_2, GTF2H2 family member C, copy 2, [RH, Score=306, Expect=1e-100]; ENSG00000276910, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=303, Expect=3e-99]; ENSG00000145736, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=303, Expect=3e-99]; ENSG00000275045, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=303, Expect=3e-99]} {Mouse: ENSMUSG00000021639, Gtf2h2, general transcription factor II H, polypeptide 2, [RH, Score=307, Expect=4e-101]} {Dmel: FBgn0037202, Ssl1, Suppressor of stem-loop mutation, [RH, Score=328, Expect=1e-108]} {Celegans: WBGene00011814, T16H12.4, General transcription factor IIH subunit 2, [RH, Score=250, Expect=2e-79]} {Smed: dd_Smed_v6_7018_0_1, dd_Smed_v6_7018_0_1, [RH, Score=278, Expect=5e-90]} {RNA1509_19373, RNA1509_29359} {RNA1310_19775, RNA1509_29359} {RNA1509_29359, RNA815_8031} |
Cumulative graph for MligTC455_32203
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.958 | 4.173 | 0.08955 | 0.64388 | |
| RegionR2 | -0.798 | 4.173 | 0.23658 | 0.61036 | |
| RegionR3 | -0.909 | 4.173 | 0.11381 | 0.58667 | |
| RegionR4 | 1.386 | 4.173 | 0.03046 | 0.13738 | |
| RegionR5 | 1.804 | 4.173 | 0.00007 | 0.00120 | |
| RegionR6 | 0.007 | 4.173 | 0.98526 | 1.00000 | |
| RegionR7 | -0.728 | 4.173 | 0.30405 | 0.93906 | |
| RegionR8 | -2.72 | 4.173 | 0.02281 | 0.29413 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.515 | 4.173 | 0.01676 | 0.54049 | |
| RegenerationR2 | 0.413 | 4.173 | 0.47119 | 0.85817 | |
| RegenerationR3 | 0.375 | 4.173 | 0.56555 | 0.89180 | |
| RegenerationR4 | -0.648 | 4.173 | 0.31896 | 0.75718 | |
| RegenerationR5 | -1.091 | 4.173 | 0.05545 | 0.37753 | |
| RegenerationR6 | 0.349 | 4.173 | 0.57005 | 0.85162 | |
| RegenerationBL | 2.166 | 4.173 | 0.00150 | 0.03004 | |
| RegenerationTP | 0.438 | 4.173 | 0.65099 | 0.98933 |
Genes with expression patterns similar to MligTC455_32203
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32203 | 701 | 14.6 | Mlig455_051586, Mlig455_051619 | Neo: - Age: logFC(26M/2M)=0.465 Region-enriched R5: 1.804/0.00120 |
GTF2H2C, SURF1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051586 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: SURF1 family [PF02104.17, score=130.9]} {Human: ENSG00000280627, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=157, Expect=9e-45]; ENSG00000148290, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=157, Expect=9e-45]} {Mouse: ENSMUSG00000015790, Surf1, surfeit gene 1, [RH, Score=162, Expect=2e-46]} {Dmel: FBgn0029117, Surf1, Surfeit 1, [Score=152, Expect=4e-43]} {Celegans: WBGene00004787, sft-1, SURF1-like protein, [Score=138, Expect=2e-38]} {Smed: dd_Smed_v6_8214_0_1, dd_Smed_v6_8214_0_1, [Score=125, Expect=1e-33]} {RNA1509_19373} {RNA1310_19775} {RNA815_8031} Mlig455_051619 {REF} {Length: 1608} {TRANSSPLICED} {Pfam: Ssl1-like [PF04056.16, score=211.4]; von Willebrand factor type A domain [PF13519.8, score=35.9]; TFIIH C1-like domain [PF07975.14, score=33.0]} {Human: ENSG00000183474, GTF2H2C, GTF2H2 family member C, [RH, Score=306, Expect=1e-100]; ENSG00000274675, GTF2H2C_2, GTF2H2 family member C, copy 2, [RH, Score=306, Expect=1e-100]; ENSG00000276910, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=303, Expect=3e-99]; ENSG00000145736, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=303, Expect=3e-99]; ENSG00000275045, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=303, Expect=3e-99]} {Mouse: ENSMUSG00000021639, Gtf2h2, general transcription factor II H, polypeptide 2, [RH, Score=307, Expect=4e-101]} {Dmel: FBgn0037202, Ssl1, Suppressor of stem-loop mutation, [RH, Score=328, Expect=1e-108]} {Celegans: WBGene00011814, T16H12.4, General transcription factor IIH subunit 2, [RH, Score=250, Expect=2e-79]} {Smed: dd_Smed_v6_7018_0_1, dd_Smed_v6_7018_0_1, [RH, Score=278, Expect=5e-90]} {RNA1509_19373, RNA1509_29359} {RNA1310_19775, RNA1509_29359} {RNA1509_29359, RNA815_8031} |
| 2. | MligTC455_41317 | 1061 | 22.1 | Mlig455_066729, Mlig455_066743 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.287/0.00006 |
PIAS3 | 2.653 | 0.895 | - | - | 0.794 | - | 0.964 | Mlig455_066729 {REF} {Length: 2141} {Pfam: PINIT domain [PF14324.8, score=83.5]; MIZ/SP-RING zinc finger [PF02891.22, score=76.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=29.6]} {Human: ENSG00000131788, PIAS3, protein inhibitor of activated STAT 3, [RH, Score=241, Expect=2e-72]; ENSG00000033800, PIAS1, protein inhibitor of activated STAT 1, [RH, Score=237, Expect=2e-70]; ENSG00000078043, PIAS2, protein inhibitor of activated STAT 2, [RH, Score=229, Expect=2e-68]} {Mouse: ENSMUSG00000028101, Pias3, protein inhibitor of activated STAT 3, [RH, Score=238, Expect=1e-71]; ENSMUSG00000032405, Pias1, protein inhibitor of activated STAT 1, [RH, Score=238, Expect=5e-71]; ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [RH, Score=229, Expect=2e-68]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [RH, Score=267, Expect=2e-82]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [RH, Score=161, Expect=6e-43]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [RH, Score=122, Expect=2e-29]} {RNA1509_29880} {RNA1310_13374.2, RNA1509_29880} {RNA1509_29880, RNA815_10961} Mlig455_066743 {REF} {Length: 2045} {TRANSSPLICED} {Pfam: PINIT domain [PF14324.8, score=83.5]; MIZ/SP-RING zinc finger [PF02891.22, score=76.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=28.4]} {Human: ENSG00000131788, PIAS3, protein inhibitor of activated STAT 3, [RH, Score=242, Expect=8e-73]; ENSG00000033800, PIAS1, protein inhibitor of activated STAT 1, [RH, Score=237, Expect=2e-70]} {Mouse: ENSMUSG00000032405, Pias1, protein inhibitor of activated STAT 1, [RH, Score=239, Expect=2e-71]; ENSMUSG00000028101, Pias3, protein inhibitor of activated STAT 3, [RH, Score=239, Expect=5e-72]; ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [RH, Score=229, Expect=3e-68]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [RH, Score=268, Expect=1e-82]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [RH, Score=162, Expect=1e-43]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [RH, Score=122, Expect=1e-29]} {RNA1509_13935} {RNA1310_13374.1} {RNA815_10961} |
| 3. | MligTC455_49353 | 2410 | 50.21 | Mlig455_025154, Mlig455_063916, Mlig455_063933 | Neo: Neoblast, stringent Age: - Region-enriched R4: 1.779/0.00005 Regeneration-upregulated BL: 1.976 Regeneration-enriched BL: 1.976 |
TK2 | 1.681 | - | - | - | 0.712 | - | 0.969 | Mlig455_025154 {REF} {Length: 1178} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=142.2]; AAA domain [PF13238.8, score=26.4]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [RH, Score=169, Expect=2e-51]} {Mouse: ENSMUSG00000035824, Tk2, thymidine kinase 2, mitochondrial, [RH, Score=164, Expect=3e-49]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [RH, Score=174, Expect=1e-53]} {RNA1509_59883} {RNA1310_29021, RNA1509_59883} {RNA1509_59883, RNA815_13222} Mlig455_063916 {REF} {Length: 1163} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=139.2]; AAA domain [PF13238.8, score=25.7]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [RH, Score=167, Expect=6e-51]} {Mouse: ENSMUSG00000035824, Tk2, thymidine kinase 2, mitochondrial, [RH, Score=164, Expect=2e-49]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [RH, Score=172, Expect=5e-53]} {RNA1509_19223} {RNA1310_29021} {RNA815_13222} Mlig455_063933 {REF} {Length: 1359} {Pfam: Deoxynucleoside kinase [PF01712.21, score=138.4]; AAA domain [PF13238.8, score=24.9]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [RH, Score=168, Expect=2e-50]} {Mouse: ENSMUSG00000035824, Tk2, thymidine kinase 2, mitochondrial, [RH, Score=164, Expect=1e-48]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [RH, Score=172, Expect=7e-52]} {RNA1509_19223, RNA1509_49233} {RNA1310_29021, RNA1509_19223, RNA1509_49233} {RNA1509_19223, RNA1509_49233, RNA815_13222} |
| 4. | MligTC455_43645 | 1408 | 29.34 | Mlig455_003452, Mlig455_030678 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.110/0.04713 |
PAPOLG | 0.971 | - | - | - | - | - | 0.971 | Mlig455_003452 {REF} {Length: 2907} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=327.0]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=70.3]; Nucleotidyltransferase domain [PF01909.25, score=28.8]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=498, Expect=5e-168]; ENSG00000090060, PAPOLA, poly(A) polymerase alpha, [RH, Score=474, Expect=5e-159]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=494, Expect=6e-167]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=475, Expect=2e-159]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=466, Expect=8e-155]} {Celegans: WBGene00012528, pap-1, Poly-A Polymerase, [RH, Score=385, Expect=1e-125]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=396, Expect=6e-132]} {RNA1509_24886, RNA1509_27319, RNA1509_5210} {RNA1310_6027, RNA1509_24886, RNA1509_27319, RNA1509_5210} {RNA1509_24886, RNA1509_27319, RNA1509_5210, RNA815_1803.1} Mlig455_030678 {REF} {Length: 2904} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=326.5]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=70.3]; Nucleotidyltransferase domain [PF01909.25, score=28.8]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=494, Expect=7e-167]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=491, Expect=8e-166]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=468, Expect=1e-156]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=460, Expect=9e-153]} {Celegans: WBGene00012528, pap-1, Poly-A Polymerase, [RH, Score=386, Expect=2e-126]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=393, Expect=1e-130]} {RNA1509_5210} {RNA1310_6027} {RNA815_1803.1} |
| 5. | MligTC455_18914 | 2491 | 51.9 | Mlig455_004408, Mlig455_037229 | Neo: - Age: - |
SNX32 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_004408 {REF} {Length: 1898} {TRANSSPLICED} {Pfam: Vps5 C terminal like [PF09325.12, score=62.0]; PX domain [PF00787.26, score=47.9]} {Human: ENSG00000172803, SNX32, sorting nexin 32, [RH, Score=394, Expect=3e-135]; ENSG00000129515, SNX6, sorting nexin 6, [RH, Score=390, Expect=1e-133]; ENSG00000089006, SNX5, sorting nexin 5, [RH, Score=388, Expect=1e-132]} {Mouse: ENSMUSG00000056185, Snx32, sorting nexin 32, [RH, Score=394, Expect=3e-135]; ENSMUSG00000005656, Snx6, sorting nexin 6, [RH, Score=392, Expect=1e-134]; ENSMUSG00000027423, Snx5, sorting nexin 5, [RH, Score=385, Expect=7e-132]} {Dmel: FBgn0032005, Snx6, Sorting nexin 6, [RH, Score=373, Expect=1e-126]} {Celegans: WBGene00013354, snx-6, Sorting NeXin, [RH, Score=357, Expect=4e-120]} {Smed: dd_Smed_v6_2271_0_1, dd_Smed_v6_2271_0_1, [RH, Score=377, Expect=7e-129]} {RNA1509_3711} {RNA1310_6052} {RNA815_3316} Mlig455_037229 {REF} {Length: 2277} {Pfam: Vps5 C terminal like [PF09325.12, score=62.0]; PX domain [PF00787.26, score=47.9]} {Human: ENSG00000172803, SNX32, sorting nexin 32, [RH, Score=394, Expect=3e-135]; ENSG00000129515, SNX6, sorting nexin 6, [RH, Score=390, Expect=1e-133]; ENSG00000089006, SNX5, sorting nexin 5, [RH, Score=388, Expect=1e-132]} {Mouse: ENSMUSG00000056185, Snx32, sorting nexin 32, [RH, Score=394, Expect=3e-135]; ENSMUSG00000005656, Snx6, sorting nexin 6, [RH, Score=392, Expect=1e-134]; ENSMUSG00000027423, Snx5, sorting nexin 5, [RH, Score=385, Expect=7e-132]} {Dmel: FBgn0032005, Snx6, Sorting nexin 6, [RH, Score=373, Expect=1e-126]} {Celegans: WBGene00013354, snx-6, Sorting NeXin, [RH, Score=357, Expect=4e-120]} {Smed: dd_Smed_v6_2271_0_1, dd_Smed_v6_2271_0_1, [RH, Score=377, Expect=7e-129]} {RNA1509_3711} {RNA1310_6052, RNA1509_3711} {RNA1509_3711, RNA815_3316} |
| 6. | MligTC455_24607 | 463 | 9.65 | Mlig455_025155 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.315 Region-specific R4: 3.785 Region-enriched R4: 3.975/0.00000 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_025155 {REF} {Length: 4177} {RNA1509_3178, RNA1509_43438} {RNA1310_3011, RNA1509_3178, RNA1509_43438} {RNA1509_3178, RNA1509_43438, RNA815_901} | |
| 7. | MligTC455_41667 | 237 | 4.93 | Mlig455_030096 | Neo: - Age: - |
ING4 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_030096 {REF} {Length: 2114} {TRANSSPLICED} {Pfam: Inhibitor of growth proteins N-terminal histone-binding [PF12998.9, score=44.8]; PHD-finger [PF00628.31, score=28.0]} {Human: ENSG00000111653, ING4, inhibitor of growth family member 4, [Score=96.7, Expect=8e-23]; ENSG00000168395, ING5, inhibitor of growth family member 5, [Score=96.3, Expect=1e-22]; ENSG00000071243, ING3, inhibitor of growth family member 3, [Score=95.9, Expect=1e-21]} {Mouse: ENSMUSG00000026283, Ing5, inhibitor of growth family, member 5, [Score=97.1, Expect=2e-23]; ENSMUSG00000030330, Ing4, inhibitor of growth family, member 4, [Score=96.3, Expect=7e-23]; ENSMUSG00000029670, Ing3, inhibitor of growth family, member 3, [Score=94.7, Expect=3e-21]} {Dmel: FBgn0032516, Ing5, Inhibitor of growth family member 5, [Score=98.2, Expect=2e-23]} {Celegans: WBGene00013095, ing-3, Inhibitor of growth protein, [RH, Score=77.4, Expect=2e-15]} {Smed: dd_Smed_v6_2936_0_1, dd_Smed_v6_2936_0_1, [RH, Score=95.1, Expect=1e-21]} {RNA1509_31622, RNA1509_51663} {RNA1310_27546, RNA1509_31622, RNA1509_51663} {RNA1509_31622, RNA1509_51663, RNA815_1753} |