Data search


search
Exact
Search

Results for MligTC455_32209

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32209 302 6.30 Mlig455_031547, Mlig455_056980

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.263/0.01553

CDC23

Mlig455_031547 {REF} {Length: 2823} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=60.4]; Tetratricopeptide repeat [PF13181.8, score=57.0]; Tetratricopeptide repeat [PF07719.19, score=55.2]; Tetratricopeptide repeat [PF13428.8, score=49.7]; TPR repeat [PF13414.8, score=43.8]; Anaphase promoting complex subunit 8 / Cdc23 [PF04049.15, score=34.0]; Tetratricopeptide repeat [PF14559.8, score=28.0]; Tetratricopeptide repeat [PF13176.8, score=27.0]; Tetratricopeptide repeat [PF13424.8, score=20.8]; Tetratricopeptide repeat [PF13432.8, score=20.6]; Protein of unknown function (DUF2722) [PF10846.10, score=19.5]; Tetratricopeptide repeat [PF13431.8, score=19.1]} {Human: ENSG00000094880, CDC23, cell division cycle 23, [RH, Score=305, Expect=7e-95]} {Mouse: ENSMUSG00000024370, Cdc23, CDC23 cell division cycle 23, [RH, Score=310, Expect=5e-97]} {Dmel: FBgn0032863, Cdc23, Cell division cycle 23, [Score=333, Expect=9e-105]} {Celegans: WBGene00003134, mat-3, Cell division cycle protein 23 homolog, [RH, Score=216, Expect=3e-61]} {Smed: dd_Smed_v6_4405_0_1, dd_Smed_v6_4405_0_1, [RH, Score=276, Expect=2e-84]} {RNA1509_41616} {RNA1310_11374} {RNA815_742}

Mlig455_056980 {REF} {Length: 3879} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=57.6]; Tetratricopeptide repeat [PF07719.19, score=53.3]; Tetratricopeptide repeat [PF13181.8, score=52.9]; Tetratricopeptide repeat [PF13428.8, score=45.5]; TPR repeat [PF13414.8, score=42.5]; Anaphase promoting complex subunit 8 / Cdc23 [PF04049.15, score=39.7]; Tetratricopeptide repeat [PF14559.8, score=26.9]; Tetratricopeptide repeat [PF13176.8, score=25.8]; Tetratricopeptide repeat [PF13432.8, score=21.1]; Tetratricopeptide repeat [PF13424.8, score=20.8]} {Human: ENSG00000094880, CDC23, cell division cycle 23, [RH, Score=302, Expect=1e-93]} {Mouse: ENSMUSG00000024370, Cdc23, CDC23 cell division cycle 23, [RH, Score=306, Expect=2e-95]} {Dmel: FBgn0032863, Cdc23, Cell division cycle 23, [RH, Score=332, Expect=2e-104]} {Celegans: WBGene00003134, mat-3, Cell division cycle protein 23 homolog, [RH, Score=213, Expect=6e-60]} {Smed: dd_Smed_v6_4405_0_1, dd_Smed_v6_4405_0_1, [RH, Score=279, Expect=2e-85]} {RNA1509_41616} {RNA1310_11374} {RNA815_742}

Cumulative graph for MligTC455_32209

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.359 3.363 0.11635 0.70438
RegionR2 0.065 3.363 0.93773 1.00000
RegionR3 0.576 3.363 0.23308 0.77562
RegionR4 0.345 3.363 0.52734 0.85154
RegionR5 1.263 3.363 0.00171 0.01553
RegionR6 0.375 3.363 0.47421 1.00000
RegionR7 0.446 3.363 0.50347 1.00000
RegionR8 -0.711 3.363 0.48762 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.088 3.363 0.62215 1.00000
RegenerationR2 1.088 3.363 0.07044 0.43086
RegenerationR3 1.18 3.363 0.02985 0.31024
RegenerationR4 0.601 3.363 0.24548 0.69360
RegenerationR5 0.561 3.363 0.19453 0.62636
RegenerationR6 0.573 3.363 0.34011 0.68612
RegenerationBL -1.438 3.363 0.25455 0.61151
RegenerationTP 0.647 3.363 0.48763 0.89382


Genes with expression patterns similar to MligTC455_32209

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32209 302 6.3 Mlig455_031547, Mlig455_056980

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.263/0.01553

CDC23 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_031547 {REF} {Length: 2823} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=60.4]; Tetratricopeptide repeat [PF13181.8, score=57.0]; Tetratricopeptide repeat [PF07719.19, score=55.2]; Tetratricopeptide repeat [PF13428.8, score=49.7]; TPR repeat [PF13414.8, score=43.8]; Anaphase promoting complex subunit 8 / Cdc23 [PF04049.15, score=34.0]; Tetratricopeptide repeat [PF14559.8, score=28.0]; Tetratricopeptide repeat [PF13176.8, score=27.0]; Tetratricopeptide repeat [PF13424.8, score=20.8]; Tetratricopeptide repeat [PF13432.8, score=20.6]; Protein of unknown function (DUF2722) [PF10846.10, score=19.5]; Tetratricopeptide repeat [PF13431.8, score=19.1]} {Human: ENSG00000094880, CDC23, cell division cycle 23, [RH, Score=305, Expect=7e-95]} {Mouse: ENSMUSG00000024370, Cdc23, CDC23 cell division cycle 23, [RH, Score=310, Expect=5e-97]} {Dmel: FBgn0032863, Cdc23, Cell division cycle 23, [Score=333, Expect=9e-105]} {Celegans: WBGene00003134, mat-3, Cell division cycle protein 23 homolog, [RH, Score=216, Expect=3e-61]} {Smed: dd_Smed_v6_4405_0_1, dd_Smed_v6_4405_0_1, [RH, Score=276, Expect=2e-84]} {RNA1509_41616} {RNA1310_11374} {RNA815_742}

Mlig455_056980 {REF} {Length: 3879} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=57.6]; Tetratricopeptide repeat [PF07719.19, score=53.3]; Tetratricopeptide repeat [PF13181.8, score=52.9]; Tetratricopeptide repeat [PF13428.8, score=45.5]; TPR repeat [PF13414.8, score=42.5]; Anaphase promoting complex subunit 8 / Cdc23 [PF04049.15, score=39.7]; Tetratricopeptide repeat [PF14559.8, score=26.9]; Tetratricopeptide repeat [PF13176.8, score=25.8]; Tetratricopeptide repeat [PF13432.8, score=21.1]; Tetratricopeptide repeat [PF13424.8, score=20.8]} {Human: ENSG00000094880, CDC23, cell division cycle 23, [RH, Score=302, Expect=1e-93]} {Mouse: ENSMUSG00000024370, Cdc23, CDC23 cell division cycle 23, [RH, Score=306, Expect=2e-95]} {Dmel: FBgn0032863, Cdc23, Cell division cycle 23, [RH, Score=332, Expect=2e-104]} {Celegans: WBGene00003134, mat-3, Cell division cycle protein 23 homolog, [RH, Score=213, Expect=6e-60]} {Smed: dd_Smed_v6_4405_0_1, dd_Smed_v6_4405_0_1, [RH, Score=279, Expect=2e-85]} {RNA1509_41616} {RNA1310_11374} {RNA815_742}
2. MligTC455_51925 253 5.27 Mlig455_009245

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.320/0.02123

UGCG 1.708 - - 0.758 - - 0.950 Mlig455_009245 {REF} {Length: 3283} {Pfam: Glycosyl transferase family 21 [PF13506.8, score=148.2]; Glycosyltransferase like family 2 [PF13641.8, score=73.9]; Glycosyl transferase family group 2 [PF13632.8, score=41.9]} {Human: ENSG00000148154, UGCG, UDP-glucose ceramide glucosyltransferase, [Score=301, Expect=5e-99]} {Mouse: ENSMUSG00000028381, Ugcg, UDP-glucose ceramide glucosyltransferase, [Score=306, Expect=4e-101]} {Dmel: FBgn0067102, GlcT-1, Ceramide glucosyltransferase, [Score=317, Expect=1e-104]} {Celegans: WBGene00019127, cgt-3, Ceramide glucosyltransferase 3, [RH, Score=293, Expect=4e-95]} {Smed: dd_Smed_v6_2757_0_1, dd_Smed_v6_2757_0_1, [RH, Score=291, Expect=1e-94]} {RNA1509_16764, RNA1509_43390} {RNA1310_8682.2, RNA1509_16764, RNA1509_43390} {RNA1509_16764, RNA1509_43390, RNA815_2800}
3. MligTC455_07869 135 2.81 Mlig455_068181

Neo: -

Age: -

HELQ 0.95 - - - - - 0.950 Mlig455_068181 {REF} {Length: 4217} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=56.3]; Helicase conserved C-terminal domain [PF00271.33, score=48.9]; Type III restriction enzyme, res subunit [PF04851.17, score=25.7]} {Human: ENSG00000163312, HELQ, helicase, POLQ like, [RH, Score=620, Expect=0.0]} {Mouse: ENSMUSG00000035266, Helq, helicase, POLQ-like, [RH, Score=617, Expect=0.0]} {Dmel: FBgn0002899, mus301, mutagen-sensitive 301, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00021905, helq-1, HELicase Q homolog, [RH, Score=501, Expect=7e-162]} {Smed: dd_Smed_v6_13290_0_2, dd_Smed_v6_13290_0_2, [RH, Score=572, Expect=0.0]} {RNA1509_19360} {RNA1310_6365.1, RNA1509_19360} {RNA1509_19360, RNA815_4506}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA