M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_32256

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32256 10062 209.63 Mlig455_065252

Neo: -

Age: -

 ATP5PO Mlig455_065252 {REF} {Length: 888} {TRANSSPLICED} {Pfam: ATP synthase delta (OSCP) subunit [PF00213.20, score=143.5]} {Human: ENSG00000241837, ATP5PO, ATP synthase peripheral stalk subunit OSCP, [RH, Score=170, Expect=5e-53]} {Mouse: ENSMUSG00000022956, Atp5o, ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit, [RH, Score=179, Expect=1e-56]} {Dmel: FBgn0016691, ATPsynO, ATP synthase, oligomycin sensitivity conferring protein, [RH, Score=191, Expect=3e-61]} {Celegans: WBGene00000230, atp-3, ATP synthase subunit, [RH, Score=162, Expect=5e-50]} {Smed: dd_Smed_v6_981_0_1, dd_Smed_v6_981_0_1, [RH, Score=179, Expect=4e-57]} {RNA1509_1286, RNA1509_18914, RNA1509_9804} {RNA1310_39344.2, RNA1509_1286, RNA1509_18914, RNA1509_9804} {RNA1509_1286, RNA1509_18914, RNA1509_9804, RNA815_18754.1}

Cumulative graph for MligTC455_32256

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.801 7.757 0.04133 0.49257
RegionR2 -0.151 7.757 0.56953 0.93029
RegionR3 0.352 7.757 0.10640 0.56935
RegionR4 0.699 7.757 0.00450 0.03352
RegionR5 0.384 7.757 0.07212 0.24332
RegionR6 0.314 7.757 0.15992 0.71251
RegionR7 -0.112 7.757 0.64225 1.00000
RegionR8 -0.684 7.757 0.02047 0.27885

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.148 7.757 0.76698 1.00000
RegenerationR2 0.135 7.757 0.62267 0.92413
RegenerationR3 0.004 7.757 0.98947 1.00000
RegenerationR4 0.178 7.757 0.53681 0.88689
RegenerationR5 0.201 7.757 0.47128 0.84235
RegenerationR6 0.261 7.757 0.35593 0.70080
RegenerationBL 0.765 7.757 0.00200 0.03621
RegenerationTP 0.631 7.757 0.02244 0.25496


Genes with expression patterns similar to MligTC455_32256

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32256 10062 209.63 Mlig455_065252

Neo: -

Age: -

 ATP5PO 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_065252 {REF} {Length: 888} {TRANSSPLICED} {Pfam: ATP synthase delta (OSCP) subunit [PF00213.20, score=143.5]} {Human: ENSG00000241837, ATP5PO, ATP synthase peripheral stalk subunit OSCP, [RH, Score=170, Expect=5e-53]} {Mouse: ENSMUSG00000022956, Atp5o, ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit, [RH, Score=179, Expect=1e-56]} {Dmel: FBgn0016691, ATPsynO, ATP synthase, oligomycin sensitivity conferring protein, [RH, Score=191, Expect=3e-61]} {Celegans: WBGene00000230, atp-3, ATP synthase subunit, [RH, Score=162, Expect=5e-50]} {Smed: dd_Smed_v6_981_0_1, dd_Smed_v6_981_0_1, [RH, Score=179, Expect=4e-57]} {RNA1509_1286, RNA1509_18914, RNA1509_9804} {RNA1310_39344.2, RNA1509_1286, RNA1509_18914, RNA1509_9804} {RNA1509_1286, RNA1509_18914, RNA1509_9804, RNA815_18754.1}
2. MligTC455_43878 233 4.86 Mlig455_070393

Neo: -

Age: Down-Up-Up

 SELENOT 0.951 - - - - 0.951 - Mlig455_070393 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: Rdx family [PF10262.11, score=36.8]} {Human: ENSG00000198843, SELENOT, selenoprotein T, [Score=90.1, Expect=8e-24]} {Mouse: ENSMUSG00000075700, Selenot, selenoprotein T, [Score=90.1, Expect=7e-24]} {Dmel: FBgn0031670, CG3887, [Score=94.0, Expect=2e-25]} {Celegans: WBGene00007955, selt-1.1, Putative selT-like protein C35C5.3, [Score=83.2, Expect=4e-21]} {Smed: dd_Smed_v6_969_0_1, dd_Smed_v6_969_0_1, [RH, Score=104, Expect=2e-30]} {RNA1509_3391, RNA1509_4381} {RNA1310_55836.1, RNA1509_3391, RNA1509_4381} {RNA1509_3391, RNA1509_4381, RNA815_9707.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA