Data search
Results for MligTC455_32289
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32289 | 27 | 0.55 | Mlig455_024481 | Neo: - Age: - Region-enriched R3: 7.331/0.01209 Regeneration-upregulated R4: 7.540 Regeneration-enriched R4: 7.540 |
Mlig455_024481 {REF} {Length: 1359} {NoTransDecoderORF} {RNA1509_41553} {RNA1310_36966.2} {RNA815_38063.1} |
Cumulative graph for MligTC455_32289
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -14.876 | 1.013 | 0.99992 | 1.00000 | |
| RegionR2 | 7.85 | 1.013 | 0.00519 | 0.06604 | |
| RegionR3 | 7.331 | 1.013 | 0.00033 | 0.01209 | |
| RegionR4 | -3.088 | 1.013 | 0.99980 | 1.00000 | |
| RegionR5 | 2.252 | 1.013 | 1.00000 | 1.00000 | |
| RegionR6 | 5.96 | 1.013 | 0.00719 | 0.13680 | |
| RegionR7 | -0.04 | 1.013 | 1.00000 | 1.00000 | |
| RegionR8 | -5.389 | 1.013 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.809 | 1.013 | 0.99988 | 1.00000 | |
| RegenerationR2 | 2.784 | 1.013 | 0.01851 | 0.22327 | |
| RegenerationR3 | 2.852 | 1.013 | 0.01848 | 0.24846 | |
| RegenerationR4 | 7.54 | 1.013 | 0.00002 | 0.00186 | Specific for R4: 7.540 |
| RegenerationR5 | 3.362 | 1.013 | 0.02450 | 0.26761 | |
| RegenerationR6 | 2.022 | 1.013 | 0.16852 | 0.49896 | |
| RegenerationBL | 2.065 | 1.013 | 0.99981 | 1.00000 | |
| RegenerationTP | 3.688 | 1.013 | 0.99981 | 1.00000 |
Genes with expression patterns similar to MligTC455_32289
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32289 | 27 | 0.55 | Mlig455_024481 | Neo: - Age: - Region-enriched R3: 7.331/0.01209 Regeneration-upregulated R4: 7.540 Regeneration-enriched R4: 7.540 |
3 | - | 1.000 | - | 1.000 | 1.000 | - | Mlig455_024481 {REF} {Length: 1359} {NoTransDecoderORF} {RNA1509_41553} {RNA1310_36966.2} {RNA815_38063.1} | |
| 2. | MligTC455_46719 | 52 | 1.07 | Mlig455_062168, Mlig455_062198 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_062168 {REF} {Length: 3050} {RNA1310_69620} Mlig455_062198 {REF} {Length: 3050} {RNA1310_69620} |
|
| 3. | MligTC455_31767 | 25 | 0.51 | Mlig455_006259, Mlig455_006321, Mlig455_061205 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_006259 {REF} {Length: 247} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167} Mlig455_006321 {REF} {Length: 124} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167} Mlig455_061205 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167} |
|
| 4. | MligTC455_35836 | 33 | 0.69 | Mlig455_041101 | Neo: - Age: Up-Down-Up |
KCNMA1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_041101 {REF} {Length: 4124} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=100.6]; Ion transport protein [PF00520.33, score=67.8]; Ion channel [PF07885.18, score=59.4]; Ligand-gated ion channel [PF00060.28, score=25.2]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=919, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=911, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=924, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=837, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=815, Expect=0.0]} {RNA1509_44704} {RNA1310_3248} {RNA815_7829} |
| 5. | MligTC455_34011 | 72 | 1.5 | Mlig455_033063 | Neo: - Age: - |
KCNC1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_033063 {REF} {Length: 4318} {Pfam: Ion transport protein [PF00520.33, score=148.3]; BTB/POZ domain [PF02214.24, score=101.2]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=6e-134]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=7e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=409, Expect=5e-133]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=587, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=690, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.1} {RNA815_13734} |
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