Data search
Results for MligTC455_32293
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32293 | 142 | 2.95 | Mlig455_035367 | Neo: - Age: Down-Up-Down |
Mlig455_035367 {REF} {Length: 3412} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=30.8]} {Smed: dd_Smed_v6_8885_0_1, dd_Smed_v6_8885_0_1, [RH, Score=165, Expect=2e-46]} {RNA1509_40333} {RNA1310_19313.1, RNA1509_40333} {RNA1509_40333, RNA815_19061} |
Cumulative graph for MligTC455_32293
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.398 | 2.25 | 0.86155 | 1.00000 | |
| RegionR2 | 0.795 | 2.25 | 0.39377 | 0.78827 | |
| RegionR3 | 0.274 | 2.25 | 0.70219 | 1.00000 | |
| RegionR4 | -0.16 | 2.25 | 0.87177 | 1.00000 | |
| RegionR5 | -1.172 | 2.25 | 0.11320 | 0.33222 | |
| RegionR6 | 0.792 | 2.25 | 0.26306 | 0.85088 | |
| RegionR7 | -1.389 | 2.25 | 0.23926 | 0.86354 | |
| RegionR8 | 1.257 | 2.25 | 0.19569 | 0.79132 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.49 | 2.25 | 0.59560 | 1.00000 | |
| RegenerationR2 | 0.717 | 2.25 | 0.29160 | 0.73441 | |
| RegenerationR3 | 0.409 | 2.25 | 0.61396 | 0.91443 | |
| RegenerationR4 | 0.401 | 2.25 | 0.65636 | 0.93613 | |
| RegenerationR5 | 0.844 | 2.25 | 0.30441 | 0.73165 | |
| RegenerationR6 | -1.258 | 2.25 | 0.18288 | 0.51865 | |
| RegenerationBL | 0.611 | 2.25 | 0.55011 | 0.90710 | |
| RegenerationTP | -0.064 | 2.25 | 0.96661 | 1.00000 |
Genes with expression patterns similar to MligTC455_32293
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32293 | 142 | 2.95 | Mlig455_035367 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_035367 {REF} {Length: 3412} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=30.8]} {Smed: dd_Smed_v6_8885_0_1, dd_Smed_v6_8885_0_1, [RH, Score=165, Expect=2e-46]} {RNA1509_40333} {RNA1310_19313.1, RNA1509_40333} {RNA1509_40333, RNA815_19061} | |
| 2. | MligTC455_48655 | 235 | 4.9 | Mlig455_016685, Mlig455_051240 | Neo: - Age: - |
ONECUT1 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_016685 {REF} {Length: 3882} {Pfam: CUT domain [PF02376.17, score=113.6]} {Human: ENSG00000169856, ONECUT1, one cut homeobox 1, [Score=214, Expect=1e-62]} {Mouse: ENSMUSG00000043013, Onecut1, one cut domain, family member 1, [Score=186, Expect=4e-52]; ENSMUSG00000045991, Onecut2, one cut domain, family member 2, [Score=185, Expect=7e-52]; ENSMUSG00000045518, Onecut3, one cut domain, family member 3, [Score=184, Expect=3e-51]} {Dmel: FBgn0028996, onecut, [Score=217, Expect=1e-60]} {Celegans: WBGene00015934, ceh-48, One cut domain family member, [Score=187, Expect=6e-53]} {Smed: dd_Smed_v6_16472_0_1, dd_Smed_v6_16472_0_1, [Score=214, Expect=2e-60]} {RNA1509_56542} {RNA1310_35187} {RNA815_16352} Mlig455_051240 {REF} {Length: 3794} {Pfam: CUT domain [PF02376.17, score=113.5]; Homeodomain [PF00046.31, score=43.2]; Homeobox KN domain [PF05920.13, score=22.7]} {Human: ENSG00000169856, ONECUT1, one cut homeobox 1, [Score=276, Expect=8e-86]} {Mouse: ENSMUSG00000043013, Onecut1, one cut domain, family member 1, [Score=276, Expect=8e-86]} {Dmel: FBgn0028996, onecut, [Score=283, Expect=2e-83]} {Celegans: WBGene00000459, ceh-38, Homeobox protein ceh-38, [Score=201, Expect=1e-56]} {Smed: dd_Smed_v6_25197_0_2, dd_Smed_v6_25197_0_2, [Score=259, Expect=1e-76]} {RNA1509_56542} {RNA1310_35187, RNA1509_56542} {RNA1509_56542, RNA815_16352} |
| 3. | MligTC455_49802 | 247 | 5.15 | Mlig455_036707 | Neo: - Age: - |
ZMYND8 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_036707 {REF} {Length: 2470} {Pfam: MYND finger [PF01753.20, score=23.9]} {Human: ENSG00000101040, ZMYND8, zinc finger MYND-type containing 8, [Score=121, Expect=4e-30]} {Mouse: ENSMUSG00000039671, Zmynd8, zinc finger, MYND-type containing 8, [Score=121, Expect=3e-30]} {Dmel: FBgn0039863, CG1815, [Score=100, Expect=2e-23]} {Celegans: WBGene00000262, bra-1, BMP Receptor Associated protein family, [Score=66.6, Expect=5e-13]} {Smed: dd_Smed_v6_8799_0_2, dd_Smed_v6_8799_0_2, [Score=78.2, Expect=9e-17]} {RNA1509_53076} {RNA1310_27696, RNA1509_53076} {RNA1509_53076, RNA815_11679.1} |
| 4. | MligTC455_20518 | 46 | 0.97 | Mlig455_061260 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_061260 {REF} {Length: 2941} {tRNA: Ala(CGC), score=68.6} {RNA1509_34079} {RNA1310_46597} {RNA815_18160} | |
| 5. | MligTC455_22598 | 323 | 6.72 | Mlig455_012998, Mlig455_070656 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_012998 {REF} {Length: 3998} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=107.9]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=50.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=45.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=29.1]; Aspartyl protease [PF13650.8, score=24.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=229, Expect=9e-62]} {RNA1509_5479} {RNA1310_294} {RNA815_755} Mlig455_070656 {REF} {Length: 4409} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=106.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=47.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=24.8]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=203, Expect=2e-54]} {RNA1509_5479} {RNA1310_294} {RNA815_755} |