Data search
Results for MligTC455_32388
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32388 | 308 | 6.42 | Mlig455_020365 | Neo: - Age: Up-Down-Up |
Mlig455_020365 {REF} {Length: 1920} {RNA1509_20097} {RNA1310_11633, RNA1509_20097} {RNA1509_20097, RNA815_6678} |
Cumulative graph for MligTC455_32388
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.874 | 3.04 | 0.49563 | 1.00000 | |
| RegionR2 | 0.026 | 3.04 | 0.96557 | 1.00000 | |
| RegionR3 | 0.612 | 3.04 | 0.18511 | 0.71941 | |
| RegionR4 | 0.734 | 3.04 | 0.19286 | 0.46948 | |
| RegionR5 | -0.354 | 3.04 | 0.46120 | 0.82351 | |
| RegionR6 | -0.846 | 3.04 | 0.13333 | 0.65696 | |
| RegionR7 | -0.373 | 3.04 | 0.60383 | 1.00000 | |
| RegionR8 | -0.673 | 3.04 | 0.50392 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.291 | 3.04 | 0.07788 | 0.76975 | |
| RegenerationR2 | -0.726 | 3.04 | 0.14021 | 0.56937 | |
| RegenerationR3 | -1.169 | 3.04 | 0.02358 | 0.27691 | |
| RegenerationR4 | -0.282 | 3.04 | 0.59378 | 0.91041 | |
| RegenerationR5 | -0.14 | 3.04 | 0.79423 | 0.98722 | |
| RegenerationR6 | 0.083 | 3.04 | 0.88763 | 1.00000 | |
| RegenerationBL | 0.965 | 3.04 | 0.13928 | 0.44491 | |
| RegenerationTP | -0.457 | 3.04 | 0.61134 | 0.96755 |
Genes with expression patterns similar to MligTC455_32388
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32388 | 308 | 6.42 | Mlig455_020365 | Neo: - Age: Up-Down-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020365 {REF} {Length: 1920} {RNA1509_20097} {RNA1310_11633, RNA1509_20097} {RNA1509_20097, RNA815_6678} | |
| 2. | MligTC455_34830 | 18442 | 384.21 | Mlig455_038069 | Neo: Int S/G2/M |
RPS6 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_038069 {REF} {Length: 933} {TRANSSPLICED} {Pfam: Ribosomal protein S6e [PF01092.21, score=180.8]} {Human: ENSG00000137154, RPS6, ribosomal protein S6, [RH, Score=355, Expect=9e-125]} {Mouse: ENSMUSG00000028495, Rps6, ribosomal protein S6, [RH, Score=355, Expect=6e-125]} {Dmel: FBgn0261592, RpS6, Ribosomal protein S6, [RH, Score=321, Expect=1e-111]} {Celegans: WBGene00004475, rps-6, 40S ribosomal protein S6, [RH, Score=290, Expect=2e-99]} {Smed: dd_Smed_v6_178_0_1, dd_Smed_v6_178_0_1, [RH, Score=295, Expect=9e-102]} {RNA1509_39601} {RNA1310_36660.2} {RNA815_17336.2} |
| 3. | MligTC455_25917 | 189 | 3.95 | Mlig455_032799 | Neo: - Age: Down-Up-Down |
0.952 | - | - | - | - | - | 0.952 | Mlig455_032799 {REF} {Length: 3963} {Pfam: RING-type zinc-finger [PF13445.8, score=24.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.2]; zinc-RING finger domain [PF14634.8, score=18.6]} {RNA1509_9725} {RNA1310_7028, RNA1509_9725} {RNA1509_9725, RNA815_2878} | |
| 4. | MligTC455_23313 | 10820 | 225.41 | Mlig455_014147 | Neo: Int S/G2/M Age: - |
PSMB5 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_014147 {REF} {Length: 1542} {Pfam: Proteasome subunit [PF00227.28, score=164.4]} {Human: ENSG00000100804, PSMB5, proteasome subunit beta 5, [RH, Score=283, Expect=2e-96]; ENSG00000206298, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000231631, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000230669, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000236443, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000235715, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000226201, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000204264, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000230034, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]} {Mouse: ENSMUSG00000022193, Psmb5, proteasome (prosome, macropain) subunit, beta type 5, [RH, Score=288, Expect=2e-98]; ENSMUSG00000024338, Psmb8, proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7), [RH, Score=275, Expect=6e-93]} {Dmel: FBgn0029134, Prosbeta5, Proteasome beta5 subunit, [RH, Score=285, Expect=3e-97]} {Celegans: WBGene00003951, pbs-5, Proteasome subunit beta type, [RH, Score=216, Expect=3e-70]} {Smed: dd_Smed_v6_2007_0_1, dd_Smed_v6_2007_0_1, [RH, Score=311, Expect=2e-107]} {RNA1509_17982, RNA1509_2496, RNA1509_8108} {RNA1310_26820, RNA1509_17982, RNA1509_8108} {RNA1509_17982, RNA1509_8108, RNA815_12107} |
Berezikov Lab - 2020-2021 © ERIBA