Data search


search
Exact
Search

Results for MligTC455_32407

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32407 4540 94.59 Mlig455_056476

Neo: -

Age: -

PITPNA Mlig455_056476 {REF} {Length: 2001} {TRANSSPLICED} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=369.6]} {Human: ENSG00000174238, PITPNA, phosphatidylinositol transfer protein alpha, [RH, Score=316, Expect=2e-108]; ENSG00000180957, PITPNB, phosphatidylinositol transfer protein beta, [RH, Score=306, Expect=1e-104]} {Mouse: ENSMUSG00000017781, Pitpna, phosphatidylinositol transfer protein, alpha, [RH, Score=314, Expect=8e-108]; ENSMUSG00000050017, Pitpnb, phosphatidylinositol transfer protein, beta, [RH, Score=303, Expect=1e-103]} {Dmel: FBgn0267975, vib, vibrator, [RH, Score=359, Expect=1e-125]} {Celegans: WBGene00021854, Y54F10AR.1, [RH, Score=324, Expect=4e-112]} {Smed: dd_Smed_v6_580_0_1, dd_Smed_v6_580_0_1, [RH, Score=381, Expect=1e-134]} {RNA1509_2580, RNA1509_9717} {RNA1310_10421.1, RNA1509_9717} {RNA1509_9717, RNA815_4416.1}

Cumulative graph for MligTC455_32407

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.513 6.696 0.24309 0.88967
RegionR2 -0.108 6.696 0.68572 1.00000
RegionR3 0.209 6.696 0.33688 0.87323
RegionR4 -0.292 6.696 0.22997 0.52252
RegionR5 0.375 6.696 0.06433 0.22420
RegionR6 0.452 6.696 0.03558 0.35169
RegionR7 -0.299 6.696 0.24609 0.87257
RegionR8 0.176 6.696 0.54893 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.617 6.696 0.33498 1.00000
RegenerationR2 -0.399 6.696 0.13361 0.56054
RegenerationR3 -0.239 6.696 0.37615 0.78800
RegenerationR4 0.072 6.696 0.79196 0.98449
RegenerationR5 -0.036 6.696 0.89022 1.00000
RegenerationR6 -0.368 6.696 0.17557 0.50848
RegenerationBL -0.389 6.696 0.16149 0.48195
RegenerationTP -0.427 6.696 0.16117 0.59014


Genes with expression patterns similar to MligTC455_32407

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32407 4540 94.59 Mlig455_056476

Neo: -

Age: -

PITPNA 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_056476 {REF} {Length: 2001} {TRANSSPLICED} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=369.6]} {Human: ENSG00000174238, PITPNA, phosphatidylinositol transfer protein alpha, [RH, Score=316, Expect=2e-108]; ENSG00000180957, PITPNB, phosphatidylinositol transfer protein beta, [RH, Score=306, Expect=1e-104]} {Mouse: ENSMUSG00000017781, Pitpna, phosphatidylinositol transfer protein, alpha, [RH, Score=314, Expect=8e-108]; ENSMUSG00000050017, Pitpnb, phosphatidylinositol transfer protein, beta, [RH, Score=303, Expect=1e-103]} {Dmel: FBgn0267975, vib, vibrator, [RH, Score=359, Expect=1e-125]} {Celegans: WBGene00021854, Y54F10AR.1, [RH, Score=324, Expect=4e-112]} {Smed: dd_Smed_v6_580_0_1, dd_Smed_v6_580_0_1, [RH, Score=381, Expect=1e-134]} {RNA1509_2580, RNA1509_9717} {RNA1310_10421.1, RNA1509_9717} {RNA1509_9717, RNA815_4416.1}
2. MligTC455_32406 4616 96.16 Mlig455_031415

Neo: -

Age: -

PITPNA 5.879 0.999 0.999 0.994 0.994 0.981 0.912 Mlig455_031415 {REF} {Length: 2347} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=126.7]} {Human: ENSG00000174238, PITPNA, phosphatidylinositol transfer protein alpha, [Score=140, Expect=1e-39]; ENSG00000180957, PITPNB, phosphatidylinositol transfer protein beta, [Score=135, Expect=1e-37]} {Mouse: ENSMUSG00000017781, Pitpna, phosphatidylinositol transfer protein, alpha, [Score=141, Expect=3e-40]; ENSMUSG00000050017, Pitpnb, phosphatidylinositol transfer protein, beta, [Score=135, Expect=5e-38]} {Dmel: FBgn0267975, vib, vibrator, [Score=161, Expect=4e-48]} {Celegans: WBGene00021854, Y54F10AR.1, [Score=143, Expect=3e-41]} {Smed: dd_Smed_v6_580_0_1, dd_Smed_v6_580_0_1, [Score=173, Expect=5e-53]} {RNA1509_11458, RNA1509_2580, RNA1509_45910} {RNA1310_11155.2, RNA1509_11458, RNA1509_45910} {RNA1509_11458, RNA1509_45910, RNA815_4416.1}
3. MligTC455_38075 513 10.69 Mlig455_037147

Neo: -

Age: Down-Down-Up

1.729 - - - - 0.957 0.772 Mlig455_037147 {REF} {Length: 3140} {Pfam: Zona pellucida-like domain [PF00100.25, score=46.9]; Scavenger receptor cysteine-rich domain [PF00530.20, score=43.8]} {RNA1509_39101} {RNA1310_14098} {RNA815_2224.1}
4. MligTC455_31512 462 9.62 Mlig455_059745

Neo: -

Age: Up-Up-Down

Region-enriched R4: 2.813/0.00575
Region-enriched R5: 1.844/0.02363

MTHFD1 1.728 - - 0.762 - - 0.966 Mlig455_059745 {REF} {Length: 5144} {Pfam: Formate--tetrahydrofolate ligase [PF01268.21, score=787.0]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=216.8]; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain [PF00763.25, score=109.7]} {Human: ENSG00000100714, MTHFD1, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, [RH, Score=1075, Expect=0.0]} {Mouse: ENSMUSG00000021048, Mthfd1, methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase, [RH, Score=1070, Expect=0.0]} {Dmel: FBgn0020385, pug, pugilist, [RH, Score=1027, Expect=0.0]} {Celegans: WBGene00019492, K07E3.4, [RH, Score=732, Expect=0.0]} {Smed: dd_Smed_v6_1858_0_1, dd_Smed_v6_1858_0_1, [RH, Score=1028, Expect=0.0]} {RNA1509_1569} {RNA1310_1725.1, RNA1509_1569} {RNA1509_1569, RNA815_946}
5. MligTC455_38457 4620 96.26 Mlig455_040798, Mlig455_064638

Neo: -

Age: -

Region-enriched R4: 1.243/0.00002

CIB1 0.956 - - - 0.956 - -

Mlig455_040798 {REF} {Length: 1658} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=39.1]; EF hand [PF00036.34, score=26.6]; EF-hand domain [PF13405.8, score=25.5]} {Human: ENSG00000185043, CIB1, calcium and integrin binding 1, [RH, Score=168, Expect=1e-52]} {Mouse: ENSMUSG00000030538, Cib1, calcium and integrin binding 1 (calmyrin), [RH, Score=169, Expect=2e-53]} {Dmel: FBgn0034558, Cib2, Calcium and integrin binding family member 2, [RH, Score=154, Expect=1e-47]} {Celegans: WBGene00009260, calm-1, CALMyrin (Calcium and Integrin Binding protein) homolog, [RH, Score=151, Expect=2e-46]} {Smed: dd_Smed_v6_7205_0_1, dd_Smed_v6_7205_0_1, [RH, Score=102, Expect=2e-27]} {RNA1509_3749, RNA1509_43451, RNA1509_58133} {RNA1310_19047, RNA1509_3749, RNA1509_43451, RNA1509_58133} {RNA1509_3749, RNA1509_43451, RNA1509_58133, RNA815_10483.1}

Mlig455_064638 {REF} {Length: 1675} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=39.7]; EF hand [PF00036.34, score=26.6]; EF-hand domain [PF13405.8, score=25.5]} {Human: ENSG00000185043, CIB1, calcium and integrin binding 1, [RH, Score=168, Expect=1e-52]} {Mouse: ENSMUSG00000030538, Cib1, calcium and integrin binding 1 (calmyrin), [RH, Score=170, Expect=2e-53]} {Dmel: FBgn0034558, Cib2, Calcium and integrin binding family member 2, [RH, Score=155, Expect=1e-47]} {Celegans: WBGene00009260, calm-1, CALMyrin (Calcium and Integrin Binding protein) homolog, [RH, Score=152, Expect=2e-46]} {Smed: dd_Smed_v6_7205_0_1, dd_Smed_v6_7205_0_1, [RH, Score=100, Expect=8e-27]} {RNA1509_3749} {RNA1310_19047} {RNA815_10483.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA