TomoSeq data search

Data search

Results for MligTC455_32474

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32474

722

15.05

Mlig455_012149, Mlig455_028949

Neo: -

Age: logFC(26M/2M)=0.353

CDCP2

Mlig455_012149 {REF} {Length: 6083} {Pfam: CUB domain [PF00431.22, score=111.3]} {Human: ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=64.7, Expect=4e-10]} {Mouse: ENSMUSG00000047636, Cdcp2, CUB domain containing protein 2, [Score=77.8, Expect=2e-14]} {Dmel: FBgn0052702, Cubn, Cubilin, [Score=58.5, Expect=3e-08]} {Celegans: WBGene00003555, nas-39, Zinc metalloproteinase nas-39, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_10040} {RNA1310_1419.2} {RNA815_334}

Mlig455_028949 {REF} {Length: 4939} {Pfam: CUB domain [PF00431.22, score=97.9]} {Human: ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=60.1, Expect=2e-08]; ENSG00000107611, CUBN, cubilin, [Score=58.5, Expect=1e-07]} {Mouse: ENSMUSG00000047636, Cdcp2, CUB domain containing protein 2, [Score=67.4, Expect=6e-11]} {Dmel: FBgn0052702, Cubn, Cubilin, [Score=60.8, Expect=1e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=50.1, Expect=9e-06]} {RNA1509_10040} {RNA1310_1419.2} {RNA815_334}

Cumulative graph for MligTC455_32474

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.578	4.234	0.01407	0.33370
RegionR2	1.496	4.234	0.05955	0.29384
RegionR3	1.038	4.234	0.18250	0.71499
RegionR4	-0.042	4.234	0.86220	1.00000
RegionR5	0.202	4.234	0.76056	1.00000
RegionR6	1.183	4.234	0.11542	0.61977
RegionR7	1.761	4.234	0.01728	0.24065
RegionR8	1.941	4.234	0.02064	0.27992

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.233	4.234	0.99998	1.00000
RegenerationR2	0.549	4.234	0.21424	0.66136
RegenerationR3	0.863	4.234	0.08420	0.47419
RegenerationR4	1.247	4.234	0.01727	0.20595
RegenerationR5	0.998	4.234	0.04347	0.34188
RegenerationR6	0.855	4.234	0.08304	0.36014
RegenerationBL	-0.732	4.234	0.19196	0.52667
RegenerationTP	0.129	4.234	0.81793	1.00000

Genes with expression patterns similar to MligTC455_32474

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32474	722	15.05	Mlig455_012149, Mlig455_028949	Neo: - Age: logFC(26M/2M)=0.353	CDCP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012149 {REF} {Length: 6083} {Pfam: CUB domain [PF00431.22, score=111.3]} {Human: ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=64.7, Expect=4e-10]} {Mouse: ENSMUSG00000047636, Cdcp2, CUB domain containing protein 2, [Score=77.8, Expect=2e-14]} {Dmel: FBgn0052702, Cubn, Cubilin, [Score=58.5, Expect=3e-08]} {Celegans: WBGene00003555, nas-39, Zinc metalloproteinase nas-39, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_10040} {RNA1310_1419.2} {RNA815_334} Mlig455_028949 {REF} {Length: 4939} {Pfam: CUB domain [PF00431.22, score=97.9]} {Human: ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=60.1, Expect=2e-08]; ENSG00000107611, CUBN, cubilin, [Score=58.5, Expect=1e-07]} {Mouse: ENSMUSG00000047636, Cdcp2, CUB domain containing protein 2, [Score=67.4, Expect=6e-11]} {Dmel: FBgn0052702, Cubn, Cubilin, [Score=60.8, Expect=1e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=50.1, Expect=9e-06]} {RNA1509_10040} {RNA1310_1419.2} {RNA815_334}
2.	MligTC455_20605	430	8.96	Mlig455_005619	Neo: - Age: -		1.691	-	-	-	0.731	-	0.960	Mlig455_005619 {REF} {Length: 103} {NoTransDecoderORF} {RNA1509_31745} {RNA1310_18428.2} {RNA815_18336}
3.	MligTC455_50083	2725	56.77	Mlig455_014939, Mlig455_045187	Neo: - Age: Down-Down-Up		0.979	-	-	-	-	-	0.979	Mlig455_014939 {REF} {Length: 1520} {Pfam: Ribonuclease T2 family [PF00445.20, score=107.3]} {Mouse: ENSMUSG00000095687, Rnaset2a, ribonuclease T2A, [Score=75.5, Expect=6e-15]; ENSMUSG00000116876, AC122413.2, novel protein, Rnaset2b-Gm1604b readthrough, [Score=75.5, Expect=6e-15]; ENSMUSG00000116988, AC164314.2, novel transcript, [Score=75.5, Expect=6e-15]; ENSMUSG00000094724, Rnaset2b, ribonuclease T2B, [Score=75.5, Expect=6e-15]} {Celegans: WBGene00019624, K10C9.3, [Score=68.6, Expect=8e-13]} {Smed: dd_Smed_v6_1008_0_1, dd_Smed_v6_1008_0_1, [Score=70.9, Expect=7e-14]} {RNA1509_9597} {RNA1310_33558} {RNA815_15714} Mlig455_045187 {REF} {Length: 2447} {Pfam: Ribonuclease T2 family [PF00445.20, score=147.6]} {Mouse: ENSMUSG00000094724, Rnaset2b, ribonuclease T2B, [Score=91.3, Expect=2e-21]; ENSMUSG00000116988, AC164314.2, novel transcript, [Score=91.3, Expect=2e-21]; ENSMUSG00000116876, AC122413.2, novel protein, Rnaset2b-Gm1604b readthrough, [Score=91.3, Expect=2e-21]; ENSMUSG00000095687, Rnaset2a, ribonuclease T2A, [Score=91.3, Expect=2e-21]} {Celegans: WBGene00019624, K10C9.3, [Score=81.6, Expect=5e-18]} {Smed: dd_Smed_v6_1008_0_1, dd_Smed_v6_1008_0_1, [RH, Score=98.2, Expect=2e-24]} {RNA1509_9597} {RNA1310_33558, RNA1509_9597} {RNA1509_9597, RNA815_15714}
4.	MligTC455_23478	452	9.42	Mlig455_015510	Neo: - Age: -	PCDH11X	0.963	-	-	-	-	-	0.963	Mlig455_015510 {REF} {Length: 5618} {TRANSSPLICED} {Pfam: Cadherin domain [PF00028.19, score=291.6]; Cadherin-like [PF16184.7, score=55.9]; Cadherin-like [PF08266.14, score=29.3]; Bacterial cadherin-like domain [PF17803.3, score=22.9]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=271, Expect=3e-74]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=268, Expect=3e-73]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=259, Expect=2e-70]; ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=250, Expect=1e-67]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=250, Expect=4e-68]} {Dmel: FBgn0001075, ft, fat, [Score=234, Expect=4e-62]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=151, Expect=2e-36]} {Smed: dd_Smed_v6_11223_0_1, dd_Smed_v6_11223_0_1, [RH, Score=346, Expect=4e-101]} {RNA1509_12119} {RNA1310_1326.1} {RNA815_1431}
5.	MligTC455_25398	690	14.38	Mlig455_050727	Neo: - Age: -	BIRC2	0.955	-	-	-	0.955	-	-	Mlig455_050727 {REF} {Length: 2691} {TRANSSPLICED} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=81.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=44.5]; Prokaryotic RING finger family 4 [PF14447.8, score=28.9]} {Human: ENSG00000110330, BIRC2, baculoviral IAP repeat containing 2, [RH, Score=64.7, Expect=7e-11]} {Mouse: ENSMUSG00000032000, Birc3, baculoviral IAP repeat-containing 3, [RH, Score=96.7, Expect=1e-20]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=124, Expect=4e-30]} {Smed: dd_Smed_v6_1574_6_66, dd_Smed_v6_1574_6_66, [RH, Score=64.3, Expect=5e-11]} {RNA1509_10778} {RNA1310_7833.1} {RNA815_964.1}
6.	MligTC455_35401	391	8.14	Mlig455_009584	Neo: - Age: -	DIRC2	0.954	-	-	-	0.954	-	-	Mlig455_009584 {REF} {Length: 3235} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=46.8]} {Human: ENSG00000138463, DIRC2, disrupted in renal carcinoma 2, [Score=161, Expect=1e-43]} {Mouse: ENSMUSG00000022848, Dirc2, disrupted in renal carcinoma 2 (human), [Score=166, Expect=3e-45]} {Dmel: FBgn0033196, CG1358, [Score=87.4, Expect=4e-18]} {Celegans: WBGene00016586, C42C1.8, [Score=61.6, Expect=6e-10]} {Smed: dd_Smed_v6_4596_0_1, dd_Smed_v6_4596_0_1, [RH, Score=128, Expect=5e-32]} {RNA1509_12696} {RNA1310_17284} {RNA815_7063}
7.	MligTC455_44634	348	7.26	Mlig455_034481	Neo: - Age: Down-Up-Down	CCDC89	0.952	-	-	-	0.952	-	-	Mlig455_034481 {REF} {Length: 2130} {TRANSSPLICED} {Human: ENSG00000179071, CCDC89, coiled-coil domain containing 89, [RH, Score=120, Expect=2e-30]} {Mouse: ENSMUSG00000044362, Ccdc89, coiled-coil domain containing 89, [RH, Score=119, Expect=4e-30]} {Smed: dd_Smed_v6_41_2_1, dd_Smed_v6_41_2_1, [RH, Score=67.8, Expect=9e-14]} {RNA1509_12755, RNA1509_37757} {RNA1310_8733, RNA1509_37757} {RNA1509_37757, RNA815_8009.1}

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