M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_32481

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32481 39 0.81 Mlig455_039880

Neo: Germline

Age: Up-Down-Down

 Mlig455_039880 {REF} {Length: 7621} {RNA1509_13154} {RNA1310_251} {RNA815_5928.1}

Cumulative graph for MligTC455_32481

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.413 1.439 1.00000 1.00000
RegionR2 2.361 1.439 1.00000 1.00000
RegionR3 0.615 1.439 1.00000 1.00000
RegionR4 3.914 1.439 0.22315 0.51382
RegionR5 0.436 1.439 0.41811 0.77772
RegionR6 0.547 1.439 0.99988 1.00000
RegionR7 -0.08 1.439 1.00000 1.00000
RegionR8 -1.38 1.439 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.674 1.439 1.00000 1.00000
RegenerationR2 2.298 1.439 0.33178 0.76859
RegenerationR3 3.321 1.439 0.23356 0.66818
RegenerationR4 0.942 1.439 0.58039 0.90555
RegenerationR5 0.081 1.439 0.71201 0.95648
RegenerationR6 4.299 1.439 0.17276 0.50472
RegenerationBL 0.82 1.439 1.00000 1.00000
RegenerationTP 5.927 1.439 0.12003 0.52917


Genes with expression patterns similar to MligTC455_32481

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32481 39 0.81 Mlig455_039880

Neo: Germline

Age: Up-Down-Down

 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_039880 {REF} {Length: 7621} {RNA1509_13154} {RNA1310_251} {RNA815_5928.1}
2. MligTC455_21352 494 10.28 Mlig455_057930, Mlig455_057965

Neo: Germline

Age: -

Region-enriched R4: 2.987/0.02788

 4.259 0.966 0.796 - 0.744 0.768 0.985

Mlig455_057930 {REF} {Length: 1113} {RNA1509_17294} {RNA1310_35081} {RNA815_17491}

Mlig455_057965 {REF} {Length: 987} {RNA1509_17294} {RNA1310_35081, RNA1509_17294} {RNA1509_17294, RNA815_17491}
3. MligTC455_46700 417 8.7 Mlig455_000883

Neo: Irradiation

Age: -

Region-specific R4: 5.331

Region-enriched R4: 3.569/0.00004

 WSCD2 4.105 0.770 0.828 - 0.771 0.754 0.982 Mlig455_000883 {REF} {Length: 1861} {Pfam: WSC domain [PF01822.21, score=73.8]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=48.1, Expect=6e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.1, Expect=1e-06]} {RNA1509_13599, RNA1509_19073} {RNA1310_24400, RNA1509_19073} {RNA1509_19073, RNA815_17032}
4. MligTC455_19698 66 1.38 Mlig455_058188

Neo: -

Age: -

Region-enriched R4: 4.875/0.00097

 ALDH5A1 3.819 0.986 0.988 - - 0.883 0.962 Mlig455_058188 {REF} {Length: 2615} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=538.8]} {Human: ENSG00000112294, ALDH5A1, aldehyde dehydrogenase 5 family member A1, [RH, Score=480, Expect=2e-165]} {Mouse: ENSMUSG00000035936, Aldh5a1, aldhehyde dehydrogenase family 5, subfamily A1, [RH, Score=511, Expect=8e-178]} {Dmel: FBgn0039349, Ssadh, Succinic semialdehyde dehydrogenase, [RH, Score=491, Expect=1e-170]} {Celegans: WBGene00000113, alh-7, ALdehyde deHydrogenase, [RH, Score=398, Expect=2e-134]} {Smed: dd_Smed_v6_8292_0_1, dd_Smed_v6_8292_0_1, [RH, Score=444, Expect=2e-152]} {RNA1509_18920, RNA1509_29073, RNA1509_31716, RNA1509_57730} {RNA1310_16721.1, RNA1509_18920, RNA1509_29073, RNA1509_31716, RNA1509_57730} {RNA1509_18920, RNA1509_29073, RNA1509_31716, RNA1509_57730, RNA815_12649.1}
5. MligTC455_08451 610 12.7 Mlig455_040784, Mlig455_040837, Mlig455_064619

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.649/0.00050

 ITSN1 3.79 0.955 0.931 - - 0.938 0.966

Mlig455_040784 {REF} {Length: 3690} {Pfam: RhoGEF domain [PF00621.22, score=86.4]} {Human: ENSG00000205726, ITSN1, intersectin 1, [Score=73.2, Expect=9e-13]; ENSG00000146426, TIAM2, T cell lymphoma invasion and metastasis 2, [Score=70.5, Expect=6e-12]} {Mouse: ENSMUSG00000022957, Itsn1, intersectin 1 (SH3 domain protein 1A), [Score=73.2, Expect=2e-13]; ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=71.2, Expect=3e-12]} {Dmel: FBgn0035574, RhoGEF64C, Rho guanine nucleotide exchange factor at 64C, [Score=135, Expect=1e-32]} {Celegans: WBGene00006468, rhgf-1, RHo Guanine nucleotide exchange Factor, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=60.5, Expect=3e-09]} {RNA1509_22763} {RNA1310_48876} {RNA815_25180}

Mlig455_040837 {REF} {Length: 489} {NoTransDecoderORF} {RNA1509_22763} {RNA1310_48876} {RNA815_25180}

Mlig455_064619 {REF} {Length: 555} {RNA1509_22763} {RNA1310_48876, RNA1509_22763} {RNA1509_22763, RNA815_25180}
6. MligTC455_46701 138 2.87 Mlig455_056693

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.197

Region-enriched R4: 5.130/0.00000

Regeneration-downregulated R4: -3.046

Regeneration-depleted R4: -3.046

 WSCD2 3.736 0.920 0.927 - - 0.896 0.993 Mlig455_056693 {REF} {Length: 1234} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=76.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=48.9, Expect=3e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.1, Expect=8e-07]} {RNA1509_13599} {RNA1310_24400} {RNA815_17032}
7. MligTC455_10613 385 8.02 Mlig455_027582

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.580/0.00019

 3.728 0.935 0.939 - - 0.881 0.973 Mlig455_027582 {REF} {Length: 1525} {RNA1509_17797, RNA1509_37769, RNA1509_43107} {RNA1310_52505, RNA1509_17797, RNA1509_37769, RNA1509_43107} {RNA1509_17797, RNA1509_37769, RNA1509_43107, RNA815_26750}
8. MligTC455_17538 158 3.29 Mlig455_000938

Neo: Germline

Age: -

Region-specific R4: 6.343

Region-enriched R4: 3.327/0.02236

 3.716 0.966 0.942 - - 0.841 0.967 Mlig455_000938 {REF} {Length: 791} {RNA1509_37604} {RNA1310_58023, RNA1509_37604} {RNA1509_37604, RNA815_31228}
9. MligTC455_31267 218 4.55 Mlig455_048585, Mlig455_048666, Mlig455_051622

Neo: -

Age: -

Region-specific R4: 6.688

Region-enriched R4: 4.506/0.00000
Region-enriched R3: 2.803/0.03006

 3.713 0.873 0.982 - - 0.919 0.939

Mlig455_048585 {REF} {Length: 4575} {RNA1509_41432, RNA1509_52877} {RNA1310_5058.1, RNA1509_41432} {RNA1509_41432, RNA815_30060}

Mlig455_048666 {REF} {Length: 1528} {RNA1509_57689} {RNA1310_57587} {RNA815_30060}

Mlig455_051622 {REF} {Length: 919} {RNA1509_57689} {RNA1310_57587, RNA1509_57689} {RNA1509_57689, RNA815_30060}
10. MligTC455_37291 113 2.35 Mlig455_040047

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.506

Region-specific R4: 6.280

Region-enriched R4: 2.847/0.01204

 3.708 0.958 0.956 - - 0.830 0.964 Mlig455_040047 {REF} {Length: 1315} {RNA1509_39008} {RNA1310_24321.1, RNA1509_39008} {RNA1509_39008, RNA815_14409.1}
11. MligTC455_32755 37 0.77 Mlig455_058772

Neo: -

Age: -

 3.705 0.982 0.937 - - 0.862 0.924 Mlig455_058772 {REF} {Length: 2207} {NoTransDecoderORF} {RNA1509_39860} {RNA1310_61920.1} {RNA815_29386.1}
12. MligTC455_30201 49 1.02 Mlig455_006805

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.603

 SCNN1B 3.701 0.958 0.859 - - 0.935 0.949 Mlig455_006805 {REF} {Length: 2461} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=193.3]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=54.7, Expect=3e-07]; ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=54.7, Expect=4e-07]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=58.2, Expect=2e-08]; ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=55.5, Expect=1e-07]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=95.1, Expect=2e-20]} {RNA1509_36956} {RNA1310_12232.1} {RNA815_4577.1}
13. MligTC455_23392 150 3.13 Mlig455_038970

Neo: -

Age: -

Region-specific R4: 6.409

Region-enriched R4: 3.786/0.00001

 3.679 0.933 0.946 - - 0.821 0.979 Mlig455_038970 {REF} {Length: 1284} {Pfam: Homeodomain-like domain [PF13565.8, score=21.8]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=43.5, Expect=2e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
14. MligTC455_31443 223 4.65 Mlig455_051505

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.613

 PDE7A 3.679 0.941 0.897 - - 0.854 0.987 Mlig455_051505 {REF} {Length: 2631} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=171.1]} {Human: ENSG00000205268, PDE7A, phosphodiesterase 7A, [Score=140, Expect=9e-36]; ENSG00000171408, PDE7B, phosphodiesterase 7B, [Score=137, Expect=2e-34]} {Mouse: ENSMUSG00000019990, Pde7b, phosphodiesterase 7B, [Score=140, Expect=4e-36]; ENSMUSG00000069094, Pde7a, phosphodiesterase 7A, [Score=139, Expect=2e-35]} {Dmel: FBgn0000479, dnc, dunce, [Score=117, Expect=2e-27]} {Celegans: WBGene00020114, pde-4, Probable 3',5'-cyclic phosphodiesterase pde-4, [Score=107, Expect=2e-24]} {Smed: dd_Smed_v6_20355_0_1, dd_Smed_v6_20355_0_1, [Score=161, Expect=1e-44]} {RNA1509_7223} {RNA1310_12032.1} {RNA815_6602.1}
15. MligTC455_23396 160 3.34 Mlig455_042747

Neo: -

Age: Down-Down-Up

Region-specific R4: 5.331

Region-enriched R4: 2.933/0.00049

 3.675 0.934 0.949 - - 0.814 0.978 Mlig455_042747 {REF} {Length: 1858} {Pfam: Homeodomain-like domain [PF13565.8, score=24.6]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=8e-06]} {RNA1509_54267} {RNA1310_9985} {RNA815_5533.1}
16. MligTC455_08963 104 2.18 Mlig455_057627

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 6.528

Region-enriched R4: 3.092/0.01961

 3.671 0.989 0.886 - - 0.841 0.955 Mlig455_057627 {REF} {Length: 1347} {RNA1509_49959} {RNA1310_44422.1, RNA1509_49959} {RNA1509_49959, RNA815_20021.1}
17. MligTC455_23395 295 6.14 Mlig455_043321, Mlig455_071004

Neo: -

Age: -

Region-specific R4: 6.346

Region-enriched R4: 3.305/0.00025

 3.67 0.902 0.945 - - 0.849 0.974

Mlig455_043321 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}

Mlig455_071004 {REF} {Length: 980} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
18. MligTC455_50925 137 2.85 Mlig455_003574

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.374

Region-enriched R4: 5.281/0.00000

Regeneration-upregulated BL: 6.057

Regeneration-enriched BL: 6.057

 3.664 0.874 0.970 - - 0.915 0.905 Mlig455_003574 {REF} {Length: 2905} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=70.5, Expect=3e-13]} {RNA1509_3548} {RNA1310_4106, RNA1509_3548} {RNA1509_3548, RNA815_21210.1}
19. MligTC455_08627 64 1.34 Mlig455_025159, Mlig455_063920

Neo: Germline

Age: logFC(26M/2M)=-0.793

 3.66 0.975 0.985 - - 0.719 0.981

Mlig455_025159 {REF} {Length: 981} {RNA1310_35536} {RNA815_35938}

Mlig455_063920 {REF} {Length: 958} {RNA1310_70174} {RNA815_35938}
20. MligTC455_30798 161 3.35 Mlig455_067478, Mlig455_067485

Neo: Germline

Age: -

 TCF23 3.655 0.873 0.983 - - 0.838 0.961

Mlig455_067478 {REF} {Length: 1704} {RNA1509_16377} {RNA1310_29593} {RNA815_13904.1}

Mlig455_067485 {REF} {Length: 2559} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=39.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.8]} {Human: ENSG00000163792, TCF23, transcription factor 23, [Score=75.5, Expect=2e-15]} {Mouse: ENSMUSG00000006642, Tcf23, transcription factor 23, [Score=73.9, Expect=3e-15]} {Dmel: FBgn0011277, HLH4C, Helix loop helix protein 4C, [Score=49.3, Expect=5e-07]} {Celegans: WBGene00001959, hlh-15, Helix Loop Helix, [Score=45.4, Expect=2e-06]} {Smed: dd_Smed_v6_16070_0_1, dd_Smed_v6_16070_0_1, [Score=53.9, Expect=1e-08]} {RNA1509_16377} {RNA1310_29593} {RNA815_13904.1}
21. MligTC455_22315 467 9.73 Mlig455_002219

Neo: Germline

Age: -

Region-specific R4: 5.883

Region-enriched R4: 3.134/0.00561

 3.648 0.940 0.906 - - 0.825 0.977 Mlig455_002219 {REF} {Length: 910} {RNA1509_28694} {RNA1310_44777.1} {RNA815_21517.1}
22. MligTC455_26272 255 5.32 Mlig455_014177, Mlig455_062762

Neo: Germline

Age: -

Region-specific R4: 5.934

Region-enriched R4: 4.426/0.00000

 3.646 0.962 0.867 - - 0.834 0.983

Mlig455_014177 {REF} {Length: 1000} {RNA1509_45226} {RNA1310_40081.1} {RNA815_17348}

Mlig455_062762 {REF} {Length: 968} {RNA1509_41537, RNA1509_45226} {RNA1310_40081.1, RNA1509_41537, RNA1509_45226} {RNA1509_41537, RNA1509_45226, RNA815_17348}
23. MligTC455_10604 463 9.64 Mlig455_037238, Mlig455_037250

Neo: Irradiation

Age: -

Region-specific R4: 6.213

Region-enriched R4: 2.146/0.02719

 3.643 0.935 0.929 - - 0.807 0.972

Mlig455_037238 {REF} {Length: 1727} {RNA1509_16253, RNA1509_28321, RNA1509_32763, RNA1509_54188} {RNA1310_46499, RNA1509_16253, RNA1509_28321, RNA1509_32763, RNA1509_54188} {RNA1509_16253, RNA1509_28321, RNA1509_32763, RNA1509_54188, RNA815_25937}

Mlig455_037250 {REF} {Length: 1000} {RNA1509_16253} {RNA1310_46499} {RNA815_25937}
24. MligTC455_09246 51 1.07 Mlig455_003134

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.651

 FKBP4 3.639 0.926 0.962 - - 0.789 0.962 Mlig455_003134 {REF} {Length: 1951} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=98.8]; Tetratricopeptide repeat [PF00515.30, score=48.4]; Tetratricopeptide repeat [PF07719.19, score=39.4]; Tetratricopeptide repeat [PF14559.8, score=27.2]; Tetratricopeptide repeat [PF13371.8, score=25.7]; TPR repeat [PF13414.8, score=25.4]; Tetratricopeptide repeat [PF13428.8, score=24.1]; Tetratricopeptide repeat [PF13181.8, score=24.0]; Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=20.8]} {Human: ENSG00000004478, FKBP4, FK506 binding protein 4, [Score=273, Expect=5e-86]} {Mouse: ENSMUSG00000030357, Fkbp4, FK506 binding protein 4, [Score=270, Expect=8e-85]} {Dmel: FBgn0029174, FKBP59, FK506-binding protein FKBP59, [Score=199, Expect=3e-58]} {Celegans: WBGene00001431, fkb-6, Peptidylprolyl isomerase, [Score=211, Expect=5e-63]} {Smed: dd_Smed_v6_1921_0_1, dd_Smed_v6_1921_0_1, [Score=190, Expect=4e-55]} {RNA1509_12859, RNA1509_20590} {RNA1310_7830, RNA1509_12859, RNA1509_20590} {RNA1509_12859, RNA1509_20590, RNA815_860}
25. MligTC455_17272 391 8.14 Mlig455_025736, Mlig455_025765, Mlig455_064426

Neo: Germline

Age: logFC(26M/2M)=0.555

Region-specific R4: 4.939

Region-enriched R4: 2.762/0.00014

 3.638 0.955 0.951 - - 0.786 0.946

Mlig455_025736 {REF} {Length: 2555} {TRANSSPLICED} {RNA1509_28700, RNA1509_39620} {RNA1310_9149, RNA1509_28700, RNA1509_39620} {RNA1509_28700, RNA1509_39620, RNA815_11141}

Mlig455_025765 {REF} {Length: 2544} {TRANSSPLICED} {RNA1509_39620} {RNA1310_9149} {RNA815_11141}

Mlig455_064426 {REF} {Length: 2543} {TRANSSPLICED} {RNA1509_39620} {RNA1310_9149} {RNA815_11141}
26. MligTC455_29009 274 5.71 Mlig455_052776, Mlig455_069081

Neo: -

Age: -

Region-specific R4: 4.378

Region-enriched R4: 2.453/0.02329

 3.636 0.958 0.912 - 0.809 - 0.957

Mlig455_052776 {REF} {Length: 1088} {Pfam: Integrase zinc binding domain [PF17921.3, score=47.4]} {RNA1509_52755} {RNA1310_22009.3} {RNA815_37824}

Mlig455_069081 {REF} {Length: 2633} {Pfam: Integrase zinc binding domain [PF17921.3, score=47.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=37.2]; Aspartyl protease [PF13650.8, score=34.0]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_52755} {RNA1310_2440.1} {RNA815_32614}
27. MligTC455_31929 454 9.46 Mlig455_001978, Mlig455_015837, Mlig455_045631, Mlig455_055262

Neo: -

Age: -

Region-specific R4: 4.150

Region-enriched R4: 2.426/0.01994

 NYNRIN 3.636 0.956 0.911 - 0.810 - 0.959

Mlig455_001978 {REF} {Length: 4924} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=115.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.5]; Integrase zinc binding domain [PF17921.3, score=76.9]; Integrase core domain [PF00665.28, score=53.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.8]; Aspartyl protease [PF13650.8, score=32.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=114, Expect=6e-25]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=125, Expect=3e-28]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=429, Expect=1e-131]} {RNA1509_52755} {RNA1310_2440.1} {RNA815_21486}

Mlig455_015837 {REF} {Length: 5042} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=111.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.5]; Integrase zinc binding domain [PF17921.3, score=77.0]; Integrase core domain [PF00665.28, score=53.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.8]; Aspartyl protease [PF13650.8, score=32.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=111, Expect=7e-24]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=121, Expect=4e-27]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=428, Expect=4e-131]} {RNA1509_52755} {RNA1310_2440.1} {RNA815_21486}

Mlig455_045631 {REF} {Length: 2570} {Pfam: Integrase zinc binding domain [PF17921.3, score=66.7]; Integrase core domain [PF00665.28, score=48.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=100, Expect=2e-22]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=113, Expect=1e-26]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=189, Expect=8e-56]} {RNA1509_52755} {RNA1310_1571.1} {RNA815_495.1}

Mlig455_055262 {REF} {Length: 1094} {Pfam: Integrase zinc binding domain [PF17921.3, score=48.9]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=48.5, Expect=1e-06]} {RNA1509_52755} {RNA1310_22009.3} {RNA815_37824}
28. MligTC455_46288 113 2.35 Mlig455_055376

Neo: -

Age: -

Region-specific R4: 5.336

Region-enriched R4: 3.561/0.01529

 3.635 0.932 0.984 - - 0.767 0.952 Mlig455_055376 {REF} {Length: 1070} {RNA1509_18541} {RNA1310_8605} {RNA815_21658}
29. MligTC455_12616 380 7.92 Mlig455_046014, Mlig455_055198, Mlig455_055242

Neo: Germline

Age: Up-Down-Up, logFC(26M/2M)=0.583

Region-specific R4: 5.643

Region-enriched R4: 4.047/0.00008

 3.632 0.924 0.933 - - 0.815 0.960

Mlig455_046014 {REF} {Length: 1421} {RNA1509_30590} {RNA1310_27023} {RNA815_1810.1}

Mlig455_055198 {REF} {Length: 1284} {TRANSSPLICED} {RNA1509_30590} {RNA1310_27023} {RNA815_1810.1}

Mlig455_055242 {REF} {Length: 1981} {RNA1509_30590} {RNA1310_27023} {RNA815_1810.1}
30. MligTC455_34676 709 14.78 Mlig455_025682

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.559

Region-enriched R4: 2.930/0.00006

 3.628 0.917 0.935 - - 0.788 0.988 Mlig455_025682 {REF} {Length: 1628} {RNA1509_21371, RNA1509_52809, RNA1509_54172} {RNA1310_18872, RNA1509_21371, RNA1509_52809, RNA1509_54172} {RNA1509_21371, RNA1509_52809, RNA1509_54172, RNA815_10328}
31. MligTC455_20597 327 6.82 Mlig455_010434, Mlig455_070912

Neo: Germline

Age: -

Region-specific R4: 6.568

 3.624 0.956 0.901 - - 0.840 0.927

Mlig455_010434 {REF} {Length: 1107} {RNA1509_21361, RNA1509_36699} {RNA1310_30953, RNA1509_21361, RNA1509_36699} {RNA1509_21361, RNA1509_36699, RNA815_17410}

Mlig455_070912 {REF} {Length: 1104} {RNA1509_21361, RNA1509_56430} {RNA1310_30953, RNA1509_56430} {RNA1509_56430, RNA815_17410}
32. MligTC455_37290 141 2.93 Mlig455_015058

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.589

Region-enriched R4: 5.286/0.00001

 3.622 0.973 0.904 - - 0.781 0.964 Mlig455_015058 {REF} {Length: 1217} {RNA1509_39008} {RNA1310_24321.1} {RNA815_14409.1}
33. MligTC455_43904 694 14.45 Mlig455_057393

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.427

Region-specific R4: 6.111

Region-enriched R4: 3.307/0.00002

Regeneration-downregulated R5: -4.605

Regeneration-depleted R5: -4.605

 3.62 0.850 0.960 - - 0.820 0.990 Mlig455_057393 {REF} {Length: 1676} {Pfam: Tetraspanin family [PF00335.22, score=66.9]} {Smed: dd_Smed_v6_1003_0_1, dd_Smed_v6_1003_0_1, [Score=55.8, Expect=1e-08]} {RNA1509_4050} {RNA1310_20999, RNA1509_4050} {RNA1509_4050, RNA815_8582.1}
34. MligTC455_45798 178 3.71 Mlig455_009823

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.525

Region-specific R4: 5.613

Region-enriched R4: 2.121/0.03923

 3.614 0.963 0.940 - - 0.809 0.902 Mlig455_009823 {REF} {Length: 2784} {Pfam: Cullin family [PF00888.24, score=98.9]; Cullin protein neddylation domain [PF10557.11, score=37.0]} {Smed: dd_Smed_v6_5770_0_1, dd_Smed_v6_5770_0_1, [Score=54.3, Expect=2e-07]} {RNA1509_15365, RNA1509_43160} {RNA1310_6541, RNA1509_43160} {RNA1509_43160, RNA815_7517}
35. MligTC455_47007 125 2.61 Mlig455_023877

Neo: Germline

Age: -

Region-enriched R4: 3.828/0.03386

 3.611 0.953 0.969 - - 0.706 0.983 Mlig455_023877 {REF} {Length: 1877} {RNA1509_31914, RNA1509_41845} {RNA1310_20086.2, RNA1509_31914, RNA1509_41845} {RNA1509_31914, RNA1509_41845, RNA815_17976.1}
36. MligTC455_32341 289 6.03 Mlig455_056565

Neo: Irradiation

Age: -

Region-specific R4: 6.178

Region-enriched R4: 3.257/0.00020

 3.606 0.942 0.947 - - 0.735 0.982 Mlig455_056565 {REF} {Length: 2089} {RNA1509_3582} {RNA1310_10163} {RNA815_3366.1}
37. MligTC455_31711 279 5.82 Mlig455_069480, Mlig455_069493

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.798

Region-enriched R4: 2.856/0.03209

 3.603 0.930 0.835 - - 0.852 0.986

Mlig455_069480 {REF} {Length: 2364} {RNA1509_56734} {RNA1310_14093.1, RNA1509_56734} {RNA1509_56734, RNA815_3850.1}

Mlig455_069493 {REF} {Length: 2332} {RNA1509_56734} {RNA1310_14093.1} {RNA815_24706.2}
38. MligTC455_53540 1139 23.73 Mlig455_000385, Mlig455_067958

Neo: Germline

Age: -

Region-specific R4: 6.358
Region-specific R1: 4.705

Region-enriched R4: 4.352/0.00000

 3.602 0.882 0.877 - - 0.863 0.980

Mlig455_000385 {REF} {Length: 1277} {RNA1509_13129} {RNA1310_31904} {RNA815_17226}

Mlig455_067958 {REF} {Length: 1573} {RNA1509_13129, RNA1509_15210} {RNA1310_31904, RNA1509_13129, RNA1509_15210} {RNA1509_13129, RNA1509_15210, RNA815_17226}
39. MligTC455_24332 163 3.4 Mlig455_005659, Mlig455_005704

Neo: Germline

Age: Up-Down-Down

 3.6 0.917 0.928 - - 0.773 0.982

Mlig455_005659 {REF} {Length: 3572} {RNA1509_40004} {RNA1310_9316} {RNA815_2582.2}

Mlig455_005704 {REF} {Length: 3372} {Smed: dd_Smed_v6_20221_0_2, dd_Smed_v6_20221_0_2, [RH, Score=63.2, Expect=2e-10]} {RNA1509_40004} {RNA1310_9316} {RNA815_2582.1}
40. MligTC455_13978 388 8.08 Mlig455_007531, Mlig455_024787, Mlig455_030583

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.585

Region-enriched R4: 2.995/0.00485

 3.599 0.888 0.892 - - 0.851 0.968

Mlig455_007531 {REF} {Length: 2595} {RNA1509_32577} {RNA1310_9161.1} {RNA815_24289}

Mlig455_024787 {REF} {Length: 3379} {RNA1509_32577} {RNA1310_9161.1} {RNA815_24289}

Mlig455_030583 {REF} {Length: 3481} {RNA1509_32577, RNA1509_55493, RNA1509_59638} {RNA1310_9161.1, RNA1509_32577, RNA1509_55493, RNA1509_59638} {RNA1509_32577, RNA1509_55493, RNA1509_59638, RNA815_24289}
41. MligTC455_09741 291 6.06 Mlig455_046341, Mlig455_068236

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 6.975

Region-enriched R4: 5.663/0.00058

 3.598 0.978 0.935 - - 0.703 0.982

Mlig455_046341 {REF} {Length: 743} {RNA1509_42826} {RNA1310_64147} {RNA815_52510}

Mlig455_068236 {REF} {Length: 1219} {RNA1509_40236, RNA1509_42826} {RNA1310_64147, RNA1509_40236, RNA1509_42826} {RNA1509_40236, RNA1509_42826, RNA815_52510}
42. MligTC455_15384 664 13.84 Mlig455_001684, Mlig455_063302

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 4.183/0.00288

 3.597 0.974 0.931 - - 0.715 0.977

Mlig455_001684 {REF} {Length: 1129} {RNA1509_5797} {RNA1310_35183.1} {RNA815_19585}

Mlig455_063302 {REF} {Length: 1220} {RNA1509_5797} {RNA1310_35183.1, RNA1509_5797} {RNA1509_5797, RNA815_19585}
43. MligTC455_26683 442 9.22 Mlig455_056296

Neo: Irradiation

Age: logFC(26M/2M)=-0.340

Region-specific R4: 4.959

Region-enriched R4: 4.069/0.00000

 3.588 0.852 0.927 - - 0.828 0.981 Mlig455_056296 {REF} {Length: 1215} {RNA1509_18604, RNA1509_37802, RNA1509_387, RNA1509_39435, RNA1509_8243} {RNA1310_38872, RNA1509_18604, RNA1509_37802, RNA1509_387, RNA1509_39435, RNA1509_8243} {RNA1509_18604, RNA1509_37802, RNA1509_387, RNA1509_39435, RNA1509_8243, RNA815_19442.2}
44. MligTC455_34682 666 13.87 Mlig455_060862

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.418

Region-enriched R4: 2.455/0.00130

Regeneration-downregulated R3: -3.711

Regeneration-depleted R3: -3.711

 3.588 0.941 0.918 - - 0.752 0.977 Mlig455_060862 {REF} {Length: 3195} {Smed: dd_Smed_v6_24318_0_2, dd_Smed_v6_24318_0_2, [Score=44.3, Expect=6e-06]} {RNA1509_11794, RNA1509_12868, RNA1509_7151} {RNA1310_34132, RNA1509_11794, RNA1509_12868, RNA1509_7151} {RNA1509_11794, RNA1509_12868, RNA1509_7151, RNA815_18437}
45. MligTC455_09768 628 13.09 Mlig455_006550, Mlig455_006663, Mlig455_006712

Neo: Germline

Age: logFC(26M/2M)=-0.351

Region-enriched R4: 3.880/0.00097

 3.587 0.915 0.964 - - 0.724 0.984

Mlig455_006550 {REF} {Length: 1103} {NoTransDecoderORF} {RNA1509_10027} {RNA1310_19729} {RNA815_11599}

Mlig455_006663 {REF} {Length: 1160} {RNA1509_10027} {RNA1310_19729} {RNA815_11599}

Mlig455_006712 {REF} {Length: 1015} {RNA1509_10027} {RNA1310_19729} {RNA815_11599}
46. MligTC455_27550 793 16.52 Mlig455_006578

Neo: Germline

Age: Down-Down-Down, logFC(26M/2M)=-0.933

Region-specific R4: 5.197

Region-enriched R4: 3.109/0.00239

 3.584 0.877 0.834 - - 0.891 0.982 Mlig455_006578 {REF} {Length: 752} {RNA1509_13961, RNA1509_44239, RNA1509_48369} {RNA1310_61334.2, RNA1509_13961, RNA1509_44239, RNA1509_48369} {RNA1509_13961, RNA1509_44239, RNA1509_48369, RNA815_31755.1}
47. MligTC455_14705 505 10.53 Mlig455_028104

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.268

Region-specific R4: 5.978

Region-enriched R4: 3.847/0.00000

 3.583 0.919 0.935 - - 0.751 0.978 Mlig455_028104 {REF} {Length: 1177} {RNA1509_6140} {RNA1310_34908} {RNA815_22658}
48. MligTC455_17173 46 0.96 Mlig455_059401

Neo: -

Age: Up-Down-Up

Region-enriched R4: 6.142/0.00000

 3.583 0.974 0.917 - 0.775 - 0.917 Mlig455_059401 {REF} {Length: 798} {RNA1310_42556} {RNA815_63393}
49. MligTC455_51571 79 1.65 Mlig455_010868

Neo: Germline

Age: Up-Down-Down

 3.58 0.920 0.976 - - 0.748 0.936 Mlig455_010868 {REF} {Length: 1811} {Pfam: Immunoglobulin domain [PF13927.8, score=33.3]; Immunoglobulin I-set domain [PF07679.18, score=29.3]; Immunoglobulin domain [PF00047.27, score=24.6]; Immunoglobulin domain [PF13895.8, score=24.1]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_18745} {RNA1310_19824} {RNA815_8566}
50. MligTC455_27478 64 1.33 Mlig455_000927

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.278/0.00168

 LRP2 3.578 0.945 0.963 - - 0.713 0.957 Mlig455_000927 {REF} {Length: 2875} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=191.2]} {Human: ENSG00000081479, LRP2, LDL receptor related protein 2, [Score=171, Expect=1e-44]} {Mouse: ENSMUSG00000027070, Lrp2, low density lipoprotein receptor-related protein 2, [Score=169, Expect=3e-44]} {Dmel: FBgn0261260, mgl, Megalin, [Score=146, Expect=9e-37]} {Celegans: WBGene00015083, egg-1, EGG sterile (Unfertilizable), [RH, Score=139, Expect=3e-35]} {Smed: dd_Smed_v6_9829_0_1, dd_Smed_v6_9829_0_1, [Score=90.9, Expect=4e-19]} {RNA1509_21286, RNA1509_2144, RNA1509_5344} {RNA1310_9519.2, RNA1509_21286, RNA1509_2144, RNA1509_5344} {RNA1509_21286, RNA1509_2144, RNA1509_5344, RNA815_3328.1}
51. MligTC455_38727 537 11.19 Mlig455_013574, Mlig455_061446

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.068

Region-enriched R4: 4.355/0.00000

 3.572 0.954 0.947 - - 0.703 0.968

Mlig455_013574 {REF} {Length: 2408} {Pfam: Tetraspanin family [PF00335.22, score=36.7]} {RNA1509_11439} {RNA1310_6959} {RNA815_4600}

Mlig455_061446 {REF} {Length: 2176} {Pfam: Tetraspanin family [PF00335.22, score=36.4]} {RNA1509_11439} {RNA1310_6959} {RNA815_4600}
52. MligTC455_49597 2885 60.11 Mlig455_026031, Mlig455_043196, Mlig455_050843

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.256

Region-enriched R4: 4.217/0.00000

Regeneration-depleted R3: -5.811
Regeneration-depleted BL: -4.933
Regeneration-depleted R5: -3.300
Regeneration-depleted R4: -3.277

 PRDX1 3.568 0.941 0.924 - - 0.740 0.963

Mlig455_026031 {REF} {Length: 1094} {Pfam: AhpC/TSA family [PF00578.23, score=40.3]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=40.3]; Redoxin [PF08534.12, score=24.6]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [Score=98.6, Expect=4e-25]; ENSG00000123131, PRDX4, peroxiredoxin 4, [Score=97.8, Expect=3e-24]; ENSG00000167815, PRDX2, peroxiredoxin 2, [Score=96.7, Expect=2e-24]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [Score=99.4, Expect=1e-25]; ENSMUSG00000025289, Prdx4, peroxiredoxin 4, [Score=98.6, Expect=1e-24]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [Score=98.2, Expect=3e-25]} {Dmel: FBgn0040308, Jafrac2, Thioredoxin peroxidase 2, [Score=100, Expect=9e-26]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=91.3, Expect=7e-23]} {Smed: dd_Smed_v6_3414_0_1, dd_Smed_v6_3414_0_1, [Score=104, Expect=1e-27]} {RNA1509_2944, RNA1509_48706, RNA1509_54547} {RNA1310_36127, RNA1509_2944, RNA1509_48706, RNA1509_54547} {RNA1509_2944, RNA1509_48706, RNA1509_54547, RNA815_17770}

Mlig455_043196 {REF} {Length: 966} {Pfam: AhpC/TSA family [PF00578.23, score=40.6]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=40.3]; Redoxin [PF08534.12, score=25.6]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [Score=99.0, Expect=2e-25]; ENSG00000123131, PRDX4, peroxiredoxin 4, [Score=98.6, Expect=2e-24]; ENSG00000167815, PRDX2, peroxiredoxin 2, [Score=97.4, Expect=9e-25]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [Score=99.8, Expect=8e-26]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [Score=99.4, Expect=1e-25]; ENSMUSG00000025289, Prdx4, peroxiredoxin 4, [Score=99.0, Expect=8e-25]} {Dmel: FBgn0040308, Jafrac2, Thioredoxin peroxidase 2, [Score=100, Expect=6e-26]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=93.2, Expect=1e-23]} {Smed: dd_Smed_v6_3414_0_1, dd_Smed_v6_3414_0_1, [Score=105, Expect=5e-28]} {RNA1509_2944} {RNA1310_36127} {RNA815_17770}

Mlig455_050843 {REF} {Length: 1006} {Pfam: AhpC/TSA family [PF00578.23, score=40.3]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=40.3]; Redoxin [PF08534.12, score=24.6]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [Score=98.6, Expect=4e-25]; ENSG00000123131, PRDX4, peroxiredoxin 4, [Score=97.8, Expect=3e-24]; ENSG00000167815, PRDX2, peroxiredoxin 2, [Score=96.7, Expect=2e-24]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [Score=99.4, Expect=1e-25]; ENSMUSG00000025289, Prdx4, peroxiredoxin 4, [Score=98.6, Expect=1e-24]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [Score=98.2, Expect=3e-25]} {Dmel: FBgn0040308, Jafrac2, Thioredoxin peroxidase 2, [Score=100, Expect=9e-26]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=91.3, Expect=7e-23]} {Smed: dd_Smed_v6_3414_0_1, dd_Smed_v6_3414_0_1, [Score=104, Expect=1e-27]} {RNA1509_44635, RNA1509_54547} {RNA1310_36127, RNA1509_44635} {RNA1509_44635, RNA815_17770}
53. MligTC455_29242 966 20.12 Mlig455_007368, Mlig455_066684

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.650

Region-enriched R4: 3.896/0.00007

 3.565 0.936 0.912 - - 0.736 0.981

Mlig455_007368 {REF} {Length: 1651} {RNA1509_6129} {RNA1310_42941, RNA1509_6129} {RNA1509_6129, RNA815_27778}

Mlig455_066684 {REF} {Length: 2041} {RNA1509_6129} {RNA1310_42941} {RNA815_27778}
54. MligTC455_20192 924 19.26 Mlig455_049033

Neo: Germline

Age: Down-Down-Down

Region-specific R4: 5.365

Region-enriched R4: 3.335/0.00000

 3.56 0.910 0.944 - - 0.723 0.983 Mlig455_049033 {REF} {Length: 1583} {RNA1509_1469, RNA1509_15084} {RNA1310_24025, RNA1509_15084} {RNA1509_15084, RNA815_9973.1}
55. MligTC455_09044 414 8.63 Mlig455_049252, Mlig455_050595

Neo: Germline

Age: -

Region-specific R4: 6.171

 LITAF 3.56 0.951 0.917 - - 0.708 0.984

Mlig455_049252 {REF} {Length: 1164} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=78.2]; Zinc ribbon domain [PF09723.12, score=25.4]; zinc-finger of transposase IS204/IS1001/IS1096/IS1165 [PF14690.8, score=19.6]; zinc-ribbon domain [PF13248.8, score=18.3]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [Score=82.0, Expect=3e-21]} {Dmel: FBgn0052280, CG32280, [Score=58.9, Expect=1e-12]} {Celegans: WBGene00013604, Y87G2A.18, [Score=59.3, Expect=6e-13]} {Smed: dd_Smed_v6_26606_0_1, dd_Smed_v6_26606_0_1, [Score=69.7, Expect=2e-17]} {RNA1509_20152, RNA1509_53394} {RNA1310_33591, RNA1509_20152, RNA1509_53394} {RNA1509_20152, RNA1509_53394, RNA815_15571.1}

Mlig455_050595 {REF} {Length: 896} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=78.2]; Zinc ribbon domain [PF09723.12, score=25.4]; zinc-finger of transposase IS204/IS1001/IS1096/IS1165 [PF14690.8, score=19.6]; zinc-ribbon domain [PF13248.8, score=18.3]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [Score=82.0, Expect=3e-21]} {Dmel: FBgn0052280, CG32280, [Score=58.9, Expect=1e-12]} {Celegans: WBGene00013604, Y87G2A.18, [Score=59.3, Expect=6e-13]} {Smed: dd_Smed_v6_26606_0_1, dd_Smed_v6_26606_0_1, [Score=69.7, Expect=2e-17]} {RNA1509_53394} {RNA1310_33591} {RNA815_15571.1}
56. MligTC455_16566 804 16.75 Mlig455_010834, Mlig455_033218

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.445

Region-enriched R4: 3.585/0.00000

Regeneration-downregulated R4: -2.261

Regeneration-depleted R4: -2.261

 PPP1CB 3.557 0.929 0.845 - - 0.818 0.965

Mlig455_010834 {REF} {Length: 1715} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=96.9]} {Human: ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=160, Expect=1e-44]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=157, Expect=1e-43]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=156, Expect=3e-43]} {Mouse: ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=160, Expect=7e-45]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=158, Expect=4e-44]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=158, Expect=4e-44]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=156, Expect=2e-43]} {Dmel: FBgn0000711, flw, flapwing, [Score=158, Expect=3e-44]} {Celegans: WBGene00004083, pph-1, Serine/threonine-protein phosphatase, [Score=166, Expect=4e-47]} {Smed: dd_Smed_v6_751_0_1, dd_Smed_v6_751_0_1, [Score=161, Expect=9e-46]} {RNA1509_13285, RNA1509_6761} {RNA1310_13771, RNA1509_13285, RNA1509_6761} {RNA1509_13285, RNA1509_6761, RNA815_6201}

Mlig455_033218 {REF} {Length: 1660} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=96.9]} {Human: ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=160, Expect=1e-44]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=157, Expect=1e-43]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=156, Expect=3e-43]} {Mouse: ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=160, Expect=7e-45]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=158, Expect=4e-44]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=158, Expect=4e-44]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=156, Expect=2e-43]} {Dmel: FBgn0000711, flw, flapwing, [Score=158, Expect=3e-44]} {Celegans: WBGene00004083, pph-1, Serine/threonine-protein phosphatase, [Score=166, Expect=4e-47]} {Smed: dd_Smed_v6_751_0_1, dd_Smed_v6_751_0_1, [Score=161, Expect=9e-46]} {RNA1509_6761} {RNA1310_13771} {RNA815_6201}
57. MligTC455_22390 627 13.06 Mlig455_052054, Mlig455_052104

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.257

Region-specific R4: 6.682

Region-enriched R4: 3.930/0.00000

 3.557 0.927 0.948 - - 0.707 0.975

Mlig455_052054 {REF} {Length: 2217} {RNA1509_13290, RNA1509_17719, RNA1509_44151} {RNA1310_21672, RNA1509_13290, RNA1509_17719, RNA1509_44151} {RNA1509_13290, RNA1509_17719, RNA1509_44151, RNA815_9242}

Mlig455_052104 {REF} {Length: 2217} {RNA1509_44151} {RNA1310_21672} {RNA815_9242}
58. MligTC455_53988 493 10.28 Mlig455_022536, Mlig455_022578

Neo: Irradiation

Age: Up-Down-Up

Region-specific R4: 5.703

Region-enriched R4: 3.391/0.01340

 3.554 0.828 0.915 - - 0.835 0.976

Mlig455_022536 {REF} {Length: 2410} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=172.1]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=92.8, Expect=1e-19]} {RNA1509_4881} {RNA1310_9834, RNA1509_4881} {RNA1509_4881, RNA815_3322}

Mlig455_022578 {REF} {Length: 2774} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=172.1]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=92.8, Expect=1e-19]} {RNA1509_4881} {RNA1310_26460} {RNA815_3322}
59. MligTC455_11778 469 9.78 Mlig455_023663

Neo: -

Age: -

Region-specific R4: 5.673

Region-enriched R4: 3.586/0.00000

 HSBP1 3.55 0.915 0.954 - - 0.704 0.977 Mlig455_023663 {REF} {Length: 877} {Pfam: Heat shock factor binding protein 1 [PF06825.14, score=46.5]} {Human: ENSG00000230989, HSBP1, heat shock factor binding protein 1, [Score=42.4, Expect=6e-06]} {Celegans: WBGene00002002, hsb-1, Heat Shock factor Binding protein, [Score=45.1, Expect=3e-07]} {Smed: dd_Smed_v6_1418_0_1, dd_Smed_v6_1418_0_1, [Score=43.1, Expect=1e-06]} {RNA1509_6254} {RNA1310_39822} {RNA815_20600.1}
60. MligTC455_24794 303 6.3 Mlig455_021633, Mlig455_021686

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.296

Region-specific R4: 7.227

Region-enriched R4: 4.321/0.00000

 3.547 0.955 0.930 - - 0.703 0.959

Mlig455_021633 {REF} {Length: 3836} {RNA1509_50179, RNA1509_8555} {RNA1310_2773, RNA1509_50179} {RNA1509_50179, RNA815_7241}

Mlig455_021686 {REF} {Length: 3869} {RNA1509_8555} {RNA1310_2773, RNA1509_8555} {RNA1509_8555, RNA815_7241}
61. MligTC455_11794 60 1.26 Mlig455_001869

Neo: Germline

Age: Down-Down-Down

 3.546 0.840 0.896 - - 0.848 0.962 Mlig455_001869 {REF} {Length: 2049} {RNA1509_17416} {RNA1310_11935} {RNA815_4963}
62. MligTC455_09247 366 7.63 Mlig455_062754

Neo: Germline

Age: -

Region-specific R4: 5.375

Region-enriched R4: 2.315/0.00626

 FKBP4 3.544 0.889 0.861 - - 0.808 0.986 Mlig455_062754 {REF} {Length: 1956} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=98.8]; Tetratricopeptide repeat [PF00515.30, score=48.4]; Tetratricopeptide repeat [PF07719.19, score=39.4]; Tetratricopeptide repeat [PF14559.8, score=27.2]; Tetratricopeptide repeat [PF13371.8, score=25.7]; TPR repeat [PF13414.8, score=25.4]; Tetratricopeptide repeat [PF13428.8, score=24.1]; Tetratricopeptide repeat [PF13181.8, score=24.0]; Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=20.8]} {Human: ENSG00000004478, FKBP4, FK506 binding protein 4, [Score=273, Expect=5e-86]} {Mouse: ENSMUSG00000030357, Fkbp4, FK506 binding protein 4, [Score=270, Expect=8e-85]} {Dmel: FBgn0029174, FKBP59, FK506-binding protein FKBP59, [Score=199, Expect=3e-58]} {Celegans: WBGene00001431, fkb-6, Peptidylprolyl isomerase, [Score=211, Expect=5e-63]} {Smed: dd_Smed_v6_1921_0_1, dd_Smed_v6_1921_0_1, [Score=190, Expect=4e-55]} {RNA1509_20590} {RNA1310_7830} {RNA815_860}
63. MligTC455_09270 421 8.78 Mlig455_042946

Neo: Irradiation

Age: -

Region-specific R4: 6.543

Region-enriched R4: 4.458/0.00001

 WSCD1 3.543 0.864 0.906 - - 0.797 0.976 Mlig455_042946 {REF} {Length: 1133} {Pfam: WSC domain [PF01822.21, score=56.5]} {Human: ENSG00000179314, WSCD1, WSC domain containing 1, [Score=51.6, Expect=5e-08]; ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.1, Expect=1e-07]; ENSG00000075035, WSCD2, WSC domain containing 2, [Score=49.3, Expect=3e-07]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=55.5, Expect=1e-09]; ENSMUSG00000020811, Wscd1, WSC domain containing 1, [Score=53.1, Expect=8e-09]} {RNA1509_29522, RNA1509_38010, RNA1509_44246} {RNA1310_57971, RNA1509_29522, RNA1509_38010, RNA1509_44246} {RNA1509_29522, RNA1509_38010, RNA1509_44246, RNA815_30807}
64. MligTC455_21590 1053 21.93 Mlig455_010545, Mlig455_061791, Mlig455_061831

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.315

Region-specific R4: 6.478

Region-enriched R4: 4.191/0.00000

Regeneration-downregulated R4: -2.569

Regeneration-depleted R4: -2.569

 3.539 0.903 0.892 - - 0.782 0.962

Mlig455_010545 {REF} {Length: 2320} {RNA1509_5675} {RNA1310_10478} {RNA815_3812}

Mlig455_061791 {REF} {Length: 2319} {RNA1509_5675} {RNA1310_10478, RNA1509_5675} {RNA1509_5675, RNA815_3812}

Mlig455_061831 {REF} {Length: 2310} {RNA1509_5675} {RNA1310_10478} {RNA815_3812}
65. MligTC455_45799 137 2.85 Mlig455_010358

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.769

 CUL1 3.538 0.965 0.935 - - 0.737 0.901 Mlig455_010358 {REF} {Length: 2732} {Pfam: Cullin family [PF00888.24, score=111.1]; Cullin protein neddylation domain [PF10557.11, score=35.8]} {Human: ENSG00000055130, CUL1, cullin 1, [Score=52.0, Expect=4e-06]} {Mouse: ENSMUSG00000029686, Cul1, cullin 1, [Score=52.0, Expect=3e-06]} {Smed: dd_Smed_v6_5770_0_1, dd_Smed_v6_5770_0_1, [Score=62.4, Expect=7e-10]} {RNA1509_15365} {RNA1310_6541} {RNA815_7517}
66. MligTC455_09701 131 2.73 Mlig455_011883

Neo: Germline

Age: -

Region-enriched R4: 3.520/0.00079

 ACAD9 3.538 0.954 0.871 - - 0.728 0.985 Mlig455_011883 {REF} {Length: 2730} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=63.6]; Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=54.7]} {Human: ENSG00000177646, ACAD9, acyl-CoA dehydrogenase family member 9, [Score=265, Expect=1e-77]} {Mouse: ENSMUSG00000027710, Acad9, acyl-Coenzyme A dehydrogenase family, member 9, [Score=262, Expect=8e-77]} {Dmel: FBgn0034432, CG7461, [Score=189, Expect=1e-50]} {Celegans: WBGene00017125, acdh-12, Acyl CoA DeHydrogenase, [Score=182, Expect=1e-48]} {Smed: dd_Smed_v6_2663_0_1, dd_Smed_v6_2663_0_1, [Score=189, Expect=3e-51]} {RNA1509_7906} {RNA1310_11262} {RNA815_3580}
67. MligTC455_18892 321 6.68 Mlig455_016320

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.028

Region-enriched R4: 3.031/0.00019

 SEMA5A 3.536 0.936 0.857 - - 0.771 0.972 Mlig455_016320 {REF} {Length: 1871} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=57.2]; Spondin-like TSP1 domain [PF19028.2, score=44.6]; Thrombospondin type 1 domain [PF19030.2, score=22.2]} {Human: ENSG00000112902, SEMA5A, semaphorin 5A, [Score=57.8, Expect=2e-08]} {Mouse: ENSMUSG00000001128, Cfp, complement factor properdin, [Score=85.9, Expect=9e-18]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=49.7, Expect=4e-06]} {Celegans: WBGene00011880, T21B6.3, [Score=58.9, Expect=4e-09]} {Smed: dd_Smed_v6_28427_0_1, dd_Smed_v6_28427_0_1, [Score=50.1, Expect=6e-07]} {RNA1509_10632} {RNA1310_16897, RNA1509_10632} {RNA1509_10632, RNA815_7438.1}
68. MligTC455_52694 801 16.69 Mlig455_008184

Neo: -

Age: Up-Down-Up

Region-specific R4: 6.719

Region-enriched R4: 4.063/0.00440

Regeneration-downregulated R3: -5.330

Regeneration-depleted R3: -5.330

 3.535 0.876 0.821 - - 0.868 0.970 Mlig455_008184 {REF} {Length: 1216} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=26.2]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=23.1]} {RNA1509_11169, RNA1509_34148, RNA1509_5628} {RNA1310_29270, RNA1509_11169, RNA1509_34148, RNA1509_5628} {RNA1509_11169, RNA1509_34148, RNA1509_5628, RNA815_15107}
69. MligTC455_13808 155 3.23 Mlig455_034941

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.085

Region-enriched R4: 3.769/0.00009

 NLGN4Y 3.532 0.974 0.882 - - 0.724 0.952 Mlig455_034941 {REF} {Length: 3017} {Pfam: Carboxylesterase family [PF00135.30, score=88.0]} {Human: ENSG00000165246, NLGN4Y, neuroligin 4 Y-linked, [Score=65.9, Expect=2e-10]; ENSG00000146938, NLGN4X, neuroligin 4 X-linked, [Score=65.5, Expect=3e-10]; ENSG00000172831, CES2, carboxylesterase 2, [Score=63.5, Expect=9e-10]} {Mouse: ENSMUSG00000063887, Nlgn1, neuroligin 1, [Score=62.8, Expect=1e-09]; ENSMUSG00000069922, Ces3a, carboxylesterase 3A, [Score=62.0, Expect=2e-09]; ENSMUSG00000050097, Ces2b, carboxyesterase 2B, [Score=61.6, Expect=2e-09]; ENSMUSG00000062181, Ces3b, carboxylesterase 3B, [Score=60.8, Expect=4e-09]; ENSMUSG00000062826, Ces2f, carboxylesterase 2F, [Score=60.5, Expect=5e-09]; ENSMUSG00000061825, Ces2c, carboxylesterase 2C, [Score=60.5, Expect=5e-09]; ENSMUSG00000051790, Nlgn2, neuroligin 2, [Score=60.5, Expect=7e-09]} {Dmel: FBgn0032057, CG9287, [Score=68.9, Expect=9e-12]} {Celegans: WBGene00017478, F15A8.6, Carboxylic ester hydrolase, [Score=73.2, Expect=3e-13]} {Smed: dd_Smed_v6_14790_0_1, dd_Smed_v6_14790_0_1, [Score=63.5, Expect=2e-10]} {RNA1509_21813, RNA1509_49812, RNA1509_52450} {RNA1310_5544.2, RNA1509_21813, RNA1509_49812, RNA1509_52450} {RNA1509_21813, RNA1509_49812, RNA1509_52450, RNA815_2570}
70. MligTC455_07241 697 14.52 Mlig455_010028, Mlig455_054073, Mlig455_063290

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.635

Region-enriched R4: 3.640/0.00058

 3.531 0.965 0.879 - - 0.720 0.967

Mlig455_010028 {REF} {Length: 1638} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=98.2, Expect=4e-23]} {RNA1509_9016} {RNA1310_21253} {RNA815_8561}

Mlig455_054073 {REF} {Length: 1742} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=98.2, Expect=4e-23]} {RNA1509_9016} {RNA1310_21253} {RNA815_8561}

Mlig455_063290 {REF} {Length: 1660} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=99.4, Expect=2e-23]} {RNA1509_38447, RNA1509_9016} {RNA1310_21253, RNA1509_38447, RNA1509_9016} {RNA1509_38447, RNA1509_9016, RNA815_8561}
71. MligTC455_09287 81 1.69 Mlig455_049385

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.698

Region-enriched R4: 5.447/0.00000

 3.531 0.978 0.944 - - 0.741 0.868 Mlig455_049385 {REF} {Length: 3112} {Pfam: Transmembrane protein 55A [PF09788.11, score=29.5]} {RNA1509_15757, RNA1509_24853, RNA1509_50688} {RNA1310_20137, RNA1509_15757, RNA1509_24853, RNA1509_50688} {RNA1509_15757, RNA1509_24853, RNA1509_50688, RNA815_10105}
72. MligTC455_09700 131 2.72 Mlig455_011859

Neo: Germline

Age: -

Region-enriched R4: 3.272/0.01071

 3.531 0.954 0.871 - - 0.728 0.978 Mlig455_011859 {REF} {Length: 3379} {RNA1310_40686.1} {RNA815_21187}
73. MligTC455_32270 782 16.29 Mlig455_038683, Mlig455_038697

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.322

Region-enriched R4: 2.416/0.00895

 ABCA5, ABCA8 3.522 0.905 0.868 - - 0.776 0.973

Mlig455_038683 {REF} {Length: 5300} {Pfam: ABC transporter [PF00005.29, score=176.8]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=70.3]; ABC-2 family transporter protein [PF12698.9, score=42.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=33.2]; AAA domain [PF13476.8, score=24.3]; AAA ATPase domain [PF13191.8, score=22.4]; RsgA GTPase [PF03193.18, score=21.2]; AAA domain [PF13401.8, score=19.6]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=18.9]; AAA domain [PF13604.8, score=18.7]} {Human: ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=218, Expect=2e-56]; ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=215, Expect=1e-56]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=214, Expect=2e-55]} {Mouse: ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=229, Expect=3e-60]} {Dmel: FBgn0031170, CG1718, [Score=196, Expect=3e-50]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=192, Expect=6e-49]} {Smed: dd_Smed_v6_2300_0_4, dd_Smed_v6_2300_0_4, [Score=211, Expect=6e-55]} {RNA1509_1968, RNA1509_59754} {RNA1310_865.2, RNA1509_1968, RNA1509_59754} {RNA1509_1968, RNA1509_59754, RNA815_302.1}

Mlig455_038697 {REF} {Length: 4891} {Pfam: ABC transporter [PF00005.29, score=119.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=56.1]; ABC-2 family transporter protein [PF12698.9, score=35.5]; RecF/RecN/SMC N terminal domain [PF02463.21, score=25.6]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=21.1]; Domain of unknown function (DUF4162) [PF13732.8, score=20.6]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=213, Expect=5e-56]; ENSG00000198691, ABCA4, ATP binding cassette subfamily A member 4, [Score=207, Expect=2e-54]} {Mouse: ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=219, Expect=4e-58]; ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=215, Expect=7e-57]} {Dmel: FBgn0031170, CG1718, [Score=162, Expect=4e-40]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=189, Expect=6e-49]} {Smed: dd_Smed_v6_2300_0_9, dd_Smed_v6_2300_0_9, [Score=211, Expect=6e-56]} {RNA1509_1968} {RNA1310_865.2} {RNA815_302.1}
74. MligTC455_51980 769 16.02 Mlig455_020710, Mlig455_020780

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.299

Region-specific R4: 6.989

Region-enriched R4: 4.703/0.00000

 3.52 0.930 0.796 - - 0.812 0.982

Mlig455_020710 {REF} {Length: 882} {RNA1509_22143} {RNA1310_36986.1} {RNA815_17119.1}

Mlig455_020780 {REF} {Length: 1124} {RNA1509_22143} {RNA1310_36986.1, RNA1509_22143} {RNA1509_22143, RNA815_17119.1}
75. MligTC455_39593 1058 22.04 Mlig455_015027, Mlig455_038420, Mlig455_038624

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.955

Region-enriched R4: 4.577/0.00000

 3.519 0.919 0.884 - - 0.729 0.987

Mlig455_015027 {REF} {Length: 1735} {Pfam: WSC domain [PF01822.21, score=62.6]; F5/8 type C domain [PF00754.27, score=19.1]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=60.8, Expect=1e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=48.9, Expect=7e-06]} {RNA1509_11828, RNA1509_47232} {RNA1310_16499, RNA1509_11828, RNA1509_47232} {RNA1509_11828, RNA1509_47232, RNA815_7337}

Mlig455_038420 {REF} {Length: 2058} {Pfam: F5/8 type C domain [PF00754.27, score=19.0]} {RNA1509_27841, RNA1509_47727} {RNA1310_16499, RNA1509_27841, RNA1509_47727} {RNA1509_27841, RNA1509_47727, RNA815_7337}

Mlig455_038624 {REF} {Length: 1910} {Pfam: WSC domain [PF01822.21, score=62.6]; F5/8 type C domain [PF00754.27, score=19.0]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=60.5, Expect=2e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=48.5, Expect=9e-06]} {RNA1509_27841} {RNA1310_16499} {RNA815_7337}
76. MligTC455_42508 343 7.14 Mlig455_043514

Neo: Germline

Age: -

Region-specific R4: 3.748

Region-enriched R4: 3.366/0.00000

 3.518 0.867 0.854 - - 0.846 0.951 Mlig455_043514 {REF} {Length: 2020} {RNA1509_28057} {RNA1310_8034.1, RNA1509_28057} {RNA1509_28057, RNA815_12042}
77. MligTC455_34039 1753 36.51 Mlig455_004278, Mlig455_004289

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.265

Region-specific R4: 6.145

Region-enriched R4: 4.095/0.00000

 3.518 0.928 0.888 - - 0.721 0.981

Mlig455_004278 {REF} {Length: 2364} {RNA1509_1097} {RNA1310_10114.1, RNA1509_1097} {RNA1509_1097, RNA815_3296}

Mlig455_004289 {REF} {Length: 2316} {RNA1509_1097, RNA1509_7513} {RNA1310_10114.1, RNA1509_7513} {RNA1509_7513, RNA815_3296}
78. MligTC455_12829 756 15.75 Mlig455_001261

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.905

Region-enriched R4: 3.160/0.00000

Regeneration-downregulated R4: -2.173

Regeneration-depleted R4: -2.173

 3.517 0.893 0.857 - - 0.817 0.950 Mlig455_001261 {REF} {Length: 1414} {RNA1509_9284} {RNA1310_31615} {RNA815_14161}
79. MligTC455_29917 341 7.1 Mlig455_054732

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.630

Region-specific R4: 6.455

Region-enriched R4: 3.288/0.00000

Regeneration-downregulated R4: -2.053

Regeneration-depleted R4: -2.053

 SCNN1B 3.516 0.913 0.871 - - 0.754 0.978 Mlig455_054732 {REF} {Length: 2222} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=197.1]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=51.6, Expect=4e-06]; ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=55.8, Expect=1e-07]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=50.1, Expect=4e-06]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=84.0, Expect=7e-17]} {RNA1509_36956} {RNA1310_12232.1, RNA1509_36956} {RNA1509_36956, RNA815_4577.1}
80. MligTC455_31808 421 8.78 Mlig455_026293, Mlig455_052720

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.090

Region-enriched R4: 3.099/0.00077

 CABP1 3.512 0.973 0.846 - - 0.737 0.956

Mlig455_026293 {REF} {Length: 1646} {Pfam: EF hand [PF00036.34, score=77.7]; EF hand [PF13202.8, score=77.2]; EF-hand domain [PF13405.8, score=71.9]; EF-hand domain pair [PF13499.8, score=71.1]; EF-hand domain pair [PF13833.8, score=69.0]; EF-hand domain [PF14658.8, score=23.1]} {Human: ENSG00000157782, CABP1, calcium binding protein 1, [Score=76.6, Expect=1e-16]; ENSG00000175544, CABP4, calcium binding protein 4, [Score=75.5, Expect=3e-15]} {Mouse: ENSMUSG00000029544, Cabp1, calcium binding protein 1, [Score=76.6, Expect=9e-17]} {Celegans: WBGene00018376, F43C9.2, [Score=49.3, Expect=4e-07]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=80.5, Expect=1e-18]} {RNA1509_30016} {RNA1310_31998, RNA1509_30016} {RNA1509_30016, RNA815_18772}

Mlig455_052720 {REF} {Length: 1438} {Pfam: EF hand [PF13202.8, score=77.9]; EF-hand domain pair [PF13499.8, score=73.2]; EF-hand domain [PF13405.8, score=73.1]; EF-hand domain pair [PF13833.8, score=72.1]; EF hand [PF00036.34, score=71.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.2]; EF-hand domain [PF14658.8, score=23.9]; Dockerin type I domain [PF00404.20, score=19.8]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.1]} {Human: ENSG00000157782, CABP1, calcium binding protein 1, [Score=81.3, Expect=2e-17]; ENSG00000175544, CABP4, calcium binding protein 4, [Score=79.0, Expect=6e-17]} {Mouse: ENSMUSG00000029544, Cabp1, calcium binding protein 1, [Score=81.3, Expect=1e-17]} {Celegans: WBGene00018376, F43C9.2, [Score=50.8, Expect=7e-08]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=82.4, Expect=1e-19]} {RNA1509_21365} {RNA1310_31998} {RNA815_18772}
81. MligTC455_50748 307 6.4 Mlig455_014883, Mlig455_038646

Neo: Germline

Age: -

Region-specific R4: 6.874

Region-enriched R4: 4.751/0.00000

 3.51 0.876 0.967 - - 0.732 0.935

Mlig455_014883 {REF} {Length: 1366} {Pfam: Spt20 family [PF12090.10, score=18.7]} {RNA1509_22014} {RNA1310_40519.1} {RNA815_28353}

Mlig455_038646 {REF} {Length: 1303} {RNA1509_22014} {RNA1310_40519.1, RNA1509_22014} {RNA1509_22014, RNA815_28353}
82. MligTC455_38574 1952 40.66 Mlig455_022071, Mlig455_053611

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.447
Region-specific R1: 4.638

Region-enriched R4: 3.907/0.00000

Regeneration-downregulated R4: -2.691

Regeneration-depleted R4: -2.691

 CAPN11 3.509 0.913 0.836 - - 0.778 0.982

Mlig455_022071 {REF} {Length: 1573} {RNA1509_6881} {RNA1310_20269} {RNA815_8006}

Mlig455_053611 {REF} {Length: 2812} {Pfam: Calpain family cysteine protease [PF00648.23, score=130.3]; Calpain large subunit, domain III [PF01067.24, score=26.1]} {Human: ENSG00000137225, CAPN11, calpain 11, [Score=124, Expect=6e-30]; ENSG00000092529, CAPN3, calpain 3, [Score=119, Expect=2e-28]; ENSG00000135773, CAPN9, calpain 9, [Score=119, Expect=3e-28]; ENSG00000182472, CAPN12, calpain 12, [Score=118, Expect=6e-28]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=119, Expect=3e-28]; ENSMUSG00000038599, Capn8, calpain 8, [Score=117, Expect=8e-28]; ENSMUSG00000026509, Capn2, calpain 2, [Score=117, Expect=1e-27]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=125, Expect=7e-31]} {Celegans: WBGene00000546, clp-6, CaLPain family, [Score=130, Expect=1e-32]} {Smed: dd_Smed_v6_1752_0_2, dd_Smed_v6_1752_0_2, [Score=122, Expect=1e-29]} {RNA1509_2672, RNA1509_6881} {RNA1310_20269, RNA1509_2672, RNA1509_6881} {RNA1509_2672, RNA1509_6881, RNA815_8006}
83. MligTC455_08888 136 2.84 Mlig455_035306

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.207

Region-enriched R4: 3.001/0.00161

 3.508 0.952 0.841 - - 0.794 0.921 Mlig455_035306 {REF} {Length: 2433} {TRANSSPLICED} {RNA1509_42078, RNA1509_58670} {RNA1310_23904, RNA1509_58670} {RNA1509_58670, RNA815_15639}
84. MligTC455_44438 802 16.7 Mlig455_017807

Neo: Germline

Age: -

Region-specific R4: 5.560

Region-enriched R4: 3.456/0.00000

 3.506 0.897 0.914 - - 0.728 0.967 Mlig455_017807 {REF} {Length: 939} {Pfam: Dynein light chain type 1 [PF01221.20, score=45.4]} {RNA1509_21373, RNA1509_9182} {RNA1310_5517, RNA1509_21373, RNA1509_9182} {RNA1509_21373, RNA1509_9182, RNA815_393.1}
85. MligTC455_23127 564 11.74 Mlig455_043442, Mlig455_043587

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.511

 COL6A5 3.504 0.913 0.901 - - 0.722 0.968

Mlig455_043442 {REF} {Length: 4888} {Pfam: von Willebrand factor type A domain [PF00092.30, score=134.3]; von Willebrand factor type A domain [PF13519.8, score=58.3]; von Willebrand factor type A domain [PF13768.8, score=21.6]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=65.1, Expect=3e-10]} {Mouse: ENSMUSG00000043719, Col6a6, collagen, type VI, alpha 6, [Score=62.0, Expect=2e-09]; ENSMUSG00000001930, Vwf, Von Willebrand factor, [Score=61.6, Expect=3e-09]} {Celegans: WBGene00000853, cut-6, CUTiclin, [Score=51.2, Expect=2e-06]} {RNA1509_26283} {RNA1310_19252.2} {RNA815_3261}

Mlig455_043587 {REF} {Length: 3345} {Pfam: von Willebrand factor type A domain [PF00092.30, score=134.3]; von Willebrand factor type A domain [PF13519.8, score=58.3]; von Willebrand factor type A domain [PF13768.8, score=21.6]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=65.1, Expect=3e-10]} {Mouse: ENSMUSG00000043719, Col6a6, collagen, type VI, alpha 6, [Score=62.0, Expect=2e-09]; ENSMUSG00000001930, Vwf, Von Willebrand factor, [Score=61.6, Expect=3e-09]} {Celegans: WBGene00000853, cut-6, CUTiclin, [Score=51.2, Expect=2e-06]} {RNA1509_25266, RNA1509_26283} {RNA1310_19252.2, RNA1509_25266} {RNA1509_25266, RNA815_3261}
86. MligTC455_53221 138 2.88 Mlig455_054872

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.587

Region-enriched R4: 4.539/0.00001

 CALM2 3.501 0.898 0.909 - - 0.711 0.983 Mlig455_054872 {REF} {Length: 1616} {Pfam: EF hand [PF00036.34, score=121.1]; EF-hand domain pair [PF13499.8, score=105.6]; EF-hand domain [PF13405.8, score=101.9]; EF hand [PF13202.8, score=82.5]; EF-hand domain pair [PF13833.8, score=79.5]; EF-hand domain [PF14658.8, score=47.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.2]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=27.0]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=156, Expect=3e-48]; ENSG00000198668, CALM1, calmodulin 1, [Score=156, Expect=2e-48]; ENSG00000160014, CALM3, calmodulin 3, [Score=156, Expect=3e-48]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=156, Expect=2e-48]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=156, Expect=2e-48]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=156, Expect=2e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=154, Expect=1e-47]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=153, Expect=1e-47]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=153, Expect=9e-48]} {RNA1509_23274} {RNA1310_12093.1} {RNA815_4241}
87. MligTC455_07397 240 5.01 Mlig455_001364, Mlig455_001378

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.653

Region-enriched R4: 4.505/0.00135

 3.5 0.984 0.803 - - 0.769 0.944

Mlig455_001364 {REF} {Length: 1876} {Pfam: RING-variant domain [PF12906.9, score=45.2]; Ring finger domain [PF13639.8, score=20.4]} {Dmel: FBgn0034546, CG13442, [Score=47.0, Expect=9e-06]} {Celegans: WBGene00018847, marc-6, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=52.8, Expect=1e-07]} {RNA1509_59641} {RNA1310_19590, RNA1509_59641} {RNA1509_59641, RNA815_17517}

Mlig455_001378 {REF} {Length: 2104} {Pfam: RING-variant domain [PF12906.9, score=45.2]; Ring finger domain [PF13639.8, score=20.4]} {Dmel: FBgn0034546, CG13442, [Score=47.0, Expect=8e-06]} {Celegans: WBGene00018847, marc-6, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=52.8, Expect=1e-07]} {RNA1509_59641} {RNA1310_19590} {RNA815_17517}
88. MligTC455_21856 110 2.3 Mlig455_019760

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.346

Region-specific R4: 6.570

Regeneration-downregulated R4: -4.175

Regeneration-depleted R4: -4.175

 3.5 0.962 0.925 - - 0.731 0.882 Mlig455_019760 {REF} {Length: 1130} {RNA1509_36113} {RNA1310_32514.1} {RNA815_18981}
89. MligTC455_43708 25 0.52 Mlig455_064598

Neo: -

Age: -

 3.498 0.960 0.959 - - 0.776 0.803 Mlig455_064598 {REF} {Length: 1211} {Pfam: UPF0506 [PF11703.10, score=23.8]} {RNA1509_15141, RNA1509_51298} {RNA1310_54828.1, RNA1509_15141} {RNA1509_15141, RNA815_44192}
90. MligTC455_27477 265 5.51 Mlig455_000917

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.176

 3.498 0.954 0.846 - - 0.802 0.896 Mlig455_000917 {REF} {Length: 2488} {RNA1509_54936} {RNA1310_17189, RNA1509_54936} {RNA1509_54936, RNA815_7907}
91. MligTC455_30704 315 6.55 Mlig455_069706

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.460

Region-specific R4: 5.958

Region-enriched R4: 2.151/0.00994

 3.497 0.921 0.836 - - 0.773 0.967 Mlig455_069706 {REF} {Length: 3491} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=111.8]} {RNA1509_6501} {RNA1310_3605.1} {RNA815_26244}
92. MligTC455_04411 123 2.56 Mlig455_053007

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.470

Region-enriched R4: 5.651/0.00001

 3.494 0.796 0.965 - - 0.810 0.923 Mlig455_053007 {REF} {Length: 431} {NoTransDecoderORF} {RNA1509_17891} {RNA1310_11863} {RNA815_4614.2}
93. MligTC455_14554 332 6.92 Mlig455_040189

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.572

Region-enriched R4: 3.261/0.00083

 3.492 0.798 0.851 - - 0.885 0.958 Mlig455_040189 {REF} {Length: 2181} {RNA1509_25181, RNA1509_55545, RNA1509_7875} {RNA1310_12266, RNA1509_25181, RNA1509_55545} {RNA1509_25181, RNA1509_55545, RNA815_4310}
94. MligTC455_10230 116 2.42 Mlig455_016141

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.230

Region-enriched R4: 3.320/0.00241

 3.492 0.867 0.828 - - 0.824 0.973 Mlig455_016141 {REF} {Length: 1041} {NoTransDecoderORF} {RNA1509_3479, RNA1509_60175} {RNA1310_21757.1, RNA1509_60175} {RNA1509_60175, RNA815_3092.1}
95. MligTC455_50954 574 11.97 Mlig455_061656

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.422

Region-enriched R4: 3.273/0.00065

 ANGPTL2 3.489 0.817 0.908 - - 0.788 0.976 Mlig455_061656 {REF} {Length: 2304} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=89.1]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=84.0, Expect=2e-16]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=82.8, Expect=4e-16]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=80.1, Expect=3e-15]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=84.0, Expect=1e-16]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=83.2, Expect=2e-16]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=82.0, Expect=7e-16]} {Dmel: FBgn0003326, sca, scabrous, [Score=76.3, Expect=5e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=69.3, Expect=4e-12]} {RNA1509_6332} {RNA1310_16819} {RNA815_6690}
96. MligTC455_49753 351 7.32 Mlig455_031618

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.030

Region-enriched R4: 3.400/0.00442

 ACP2 3.483 0.932 0.849 - - 0.719 0.983 Mlig455_031618 {REF} {Length: 1772} {Pfam: Histidine phosphatase superfamily (branch 2) [PF00328.24, score=63.0]} {Human: ENSG00000134575, ACP2, acid phosphatase 2, lysosomal, [Score=158, Expect=6e-44]} {Mouse: ENSMUSG00000002103, Acp2, acid phosphatase 2, lysosomal, [Score=162, Expect=2e-45]} {Dmel: FBgn0000032, Acph-1, Acid phosphatase 1, [Score=144, Expect=1e-38]} {Celegans: WBGene00015161, pho-5, Putative acid phosphatase 5, [Score=164, Expect=3e-46]} {Smed: dd_Smed_v6_11594_0_1, dd_Smed_v6_11594_0_1, [Score=154, Expect=3e-42]} {RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415} {RNA1310_25105.1, RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415} {RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415, RNA815_11001.1}
97. MligTC455_37056 212 4.42 Mlig455_015938

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.924

Region-enriched R4: 3.197/0.00031

 3.483 0.925 0.780 - 0.824 - 0.954 Mlig455_015938 {REF} {Length: 2844} {RNA1509_46164} {RNA1310_331, RNA1509_46164} {RNA1509_46164, RNA815_7970.1}
98. MligTC455_17301 284 5.91 Mlig455_025245, Mlig455_025620

Neo: Germline

Age: logFC(26M/2M)=1.321

Region-specific R4: 5.576

Region-enriched R4: 3.540/0.00000

 3.482 0.923 0.818 - - 0.757 0.984

Mlig455_025245 {REF} {Length: 1380} {Pfam: EF hand [PF00036.34, score=18.8]} {RNA1509_16117} {RNA1310_22629} {RNA815_11563}

Mlig455_025620 {REF} {Length: 2012} {Pfam: EF hand [PF00036.34, score=18.9]} {RNA1509_16117} {RNA1310_22629, RNA1509_16117} {RNA1509_16117, RNA815_11563}
99. MligTC455_17195 916 19.09 Mlig455_032481

Neo: Germline

Age: -

Region-specific R4: 5.862

Region-enriched R4: 3.003/0.00108

 TXN 3.481 0.900 0.808 - - 0.809 0.964 Mlig455_032481 {REF} {Length: 1865} {Pfam: Thioredoxin [PF00085.22, score=79.0]; Thioredoxin-like [PF13905.8, score=30.1]; F plasmid transfer operon protein [PF13728.8, score=26.9]; Thioredoxin-like domain [PF13098.8, score=26.7]; OST3 / OST6 family, transporter family [PF04756.15, score=25.0]; Thioredoxin-like [PF13899.8, score=25.0]; Redoxin [PF08534.12, score=18.9]; AhpC/TSA family [PF00578.23, score=18.5]} {Human: ENSG00000136810, TXN, thioredoxin, [Score=82.0, Expect=7e-21]} {Mouse: ENSMUSG00000028367, Txn1, thioredoxin 1, [Score=76.6, Expect=4e-19]} {Dmel: FBgn0035631, Txl, Thioredoxin-like, [Score=80.9, Expect=4e-19]} {Celegans: WBGene00015062, trx-1, Thioredoxin-1, [Score=73.6, Expect=6e-18]} {Smed: dd_Smed_v6_12784_0_1, dd_Smed_v6_12784_0_1, [Score=77.8, Expect=8e-20]} {RNA1509_13179, RNA1509_22198} {RNA1310_46196, RNA1509_13179, RNA1509_22198} {RNA1509_13179, RNA1509_22198, RNA815_25201.1}
100. MligTC455_40757 148 3.07 Mlig455_020051

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.749

Region-specific R4: 4.608

Region-enriched R4: 3.161/0.00049

 3.479 0.786 0.951 - - 0.863 0.879 Mlig455_020051 {REF} {Length: 2878} {RNA1509_21782} {RNA1310_13352} {RNA815_6162}

There are 1590 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA