TomoSeq data search

Data search

Results for MligTC455_32483

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32483

13996

291.59

Mlig455_016381

Neo: -

Age: logFC(26M/2M)=0.222

RPS13

Mlig455_016381 {REF} {Length: 634} {TRANSSPLICED} {Pfam: Ribosomal S13/S15 N-terminal domain [PF08069.14, score=105.3]; Ribosomal protein S15 [PF00312.24, score=49.9]} {Human: ENSG00000110700, RPS13, ribosomal protein S13, [RH, Score=265, Expect=3e-92]} {Mouse: ENSMUSG00000090862, Rps13, ribosomal protein S13, [RH, Score=265, Expect=2e-92]} {Dmel: FBgn0010265, RpS13, Ribosomal protein S13, [RH, Score=254, Expect=4e-88]} {Celegans: WBGene00004482, rps-13, 40S ribosomal protein S13, [RH, Score=239, Expect=2e-82]} {Smed: dd_Smed_v6_360_0_1, dd_Smed_v6_360_0_1, [RH, Score=214, Expect=2e-72]} {RNA1509_16902, RNA1509_2177, RNA1509_44802} {RNA1310_56335, RNA1509_16902, RNA1509_2177, RNA1509_44802} {RNA1509_16902, RNA1509_2177, RNA1509_44802, RNA815_26689}

Cumulative graph for MligTC455_32483

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.175	8.24	0.65754	1.00000
RegionR2	-0.778	8.24	0.02538	0.17841
RegionR3	0.178	8.24	0.54418	1.00000
RegionR4	0.622	8.24	0.04917	0.19048
RegionR5	0.357	8.24	0.20621	0.49984
RegionR6	0.014	8.24	0.96145	1.00000
RegionR7	0.039	8.24	0.89462	1.00000
RegionR8	-0.257	8.24	0.45411	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.24	8.24	0.62513	1.00000
RegenerationR2	-0.289	8.24	0.44348	0.84179
RegenerationR3	-0.384	8.24	0.31500	0.74503
RegenerationR4	-0.518	8.24	0.18227	0.62290
RegenerationR5	-0.424	8.24	0.26393	0.69539
RegenerationR6	-0.26	8.24	0.49538	0.80248
RegenerationBL	-0.041	8.24	0.90073	1.00000
RegenerationTP	-0.165	8.24	0.64415	0.98557

Genes with expression patterns similar to MligTC455_32483

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32483	13996	291.59	Mlig455_016381	Neo: - Age: logFC(26M/2M)=0.222	RPS13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016381 {REF} {Length: 634} {TRANSSPLICED} {Pfam: Ribosomal S13/S15 N-terminal domain [PF08069.14, score=105.3]; Ribosomal protein S15 [PF00312.24, score=49.9]} {Human: ENSG00000110700, RPS13, ribosomal protein S13, [RH, Score=265, Expect=3e-92]} {Mouse: ENSMUSG00000090862, Rps13, ribosomal protein S13, [RH, Score=265, Expect=2e-92]} {Dmel: FBgn0010265, RpS13, Ribosomal protein S13, [RH, Score=254, Expect=4e-88]} {Celegans: WBGene00004482, rps-13, 40S ribosomal protein S13, [RH, Score=239, Expect=2e-82]} {Smed: dd_Smed_v6_360_0_1, dd_Smed_v6_360_0_1, [RH, Score=214, Expect=2e-72]} {RNA1509_16902, RNA1509_2177, RNA1509_44802} {RNA1310_56335, RNA1509_16902, RNA1509_2177, RNA1509_44802} {RNA1509_16902, RNA1509_2177, RNA1509_44802, RNA815_26689}
2.	MligTC455_34849	38810	808.54	Mlig455_029165, Mlig455_030250	Neo: Neoblast Age: logFC(26M/2M)=1.123	RPS27L	2.509	-	0.833	-	-	0.960	0.716	Mlig455_029165 {REF} {Length: 440} {TRANSSPLICED} {Pfam: Ribosomal protein S27 [PF01667.19, score=95.0]} {Human: ENSG00000185088, RPS27L, ribosomal protein S27 like, [RH, Score=135, Expect=6e-43]; ENSG00000177954, RPS27, ribosomal protein S27, [RH, Score=130, Expect=4e-41]} {Mouse: ENSMUSG00000036781, Rps27l, ribosomal protein S27-like, [RH, Score=135, Expect=4e-43]; ENSMUSG00000090733, Rps27, ribosomal protein S27, [RH, Score=130, Expect=3e-41]; ENSMUSG00000050621, Rps27rt, ribosomal protein S27, retrogene, [RH, Score=130, Expect=3e-41]} {Dmel: FBgn0039300, RpS27, Ribosomal protein S27, [RH, Score=142, Expect=9e-46]} {Celegans: WBGene00004496, rps-27, 40S ribosomal protein S27, [RH, Score=127, Expect=6e-40]} {Smed: dd_Smed_v6_106_0_1, dd_Smed_v6_106_0_1, [RH, Score=127, Expect=3e-40]} {RNA1509_53664} {RNA1310_80964, RNA1509_53664} {RNA1509_53664, RNA815_41172} Mlig455_030250 {REF} {Length: 439} {TRANSSPLICED} {Pfam: Ribosomal protein S27 [PF01667.19, score=95.0]} {Human: ENSG00000185088, RPS27L, ribosomal protein S27 like, [RH, Score=135, Expect=6e-43]; ENSG00000177954, RPS27, ribosomal protein S27, [RH, Score=130, Expect=4e-41]} {Mouse: ENSMUSG00000036781, Rps27l, ribosomal protein S27-like, [RH, Score=135, Expect=4e-43]; ENSMUSG00000090733, Rps27, ribosomal protein S27, [RH, Score=130, Expect=3e-41]; ENSMUSG00000050621, Rps27rt, ribosomal protein S27, retrogene, [RH, Score=130, Expect=3e-41]} {Dmel: FBgn0039300, RpS27, Ribosomal protein S27, [RH, Score=142, Expect=9e-46]} {Celegans: WBGene00004496, rps-27, 40S ribosomal protein S27, [RH, Score=127, Expect=6e-40]} {Smed: dd_Smed_v6_106_0_1, dd_Smed_v6_106_0_1, [RH, Score=127, Expect=3e-40]} {RNA1509_53664} {RNA1310_80964} {RNA815_41172}
3.	MligTC455_34848	19367	403.49	Mlig455_029194	Neo: - Age: logFC(26M/2M)=-1.992		2.506	-	0.835	-	-	0.957	0.714	Mlig455_029194 {REF} {Length: 440} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_53664} {RNA1310_80964} {RNA815_41172}
4.	MligTC455_34147	14536	302.84	Mlig455_010351	Neo: Int S/G2/M Age: Down-Down-Up	RPL39	1.685	-	0.714	-	-	0.971	-	Mlig455_010351 {REF} {Length: 345} {TRANSSPLICED} {Pfam: Ribosomal L39 protein [PF00832.22, score=74.4]} {Human: ENSG00000198918, RPL39, ribosomal protein L39, [RH, Score=82.4, Expect=8e-23]} {Mouse: ENSMUSG00000079641, Rpl39, ribosomal protein L39, [RH, Score=82.4, Expect=5e-23]; ENSMUSG00000039209, Rpl39l, ribosomal protein L39-like, [RH, Score=78.6, Expect=1e-21]} {Dmel: FBgn0023170, RpL39, Ribosomal protein L39, [RH, Score=72.4, Expect=3e-19]} {Celegans: WBGene00004453, rpl-39, 60S ribosomal protein L39, [RH, Score=73.6, Expect=8e-20]} {Smed: dd_Smed_v6_67236_0_1, dd_Smed_v6_67236_0_1, [RH, Score=75.5, Expect=1e-20]} {RNA1509_39602} {RNA1310_92891, RNA1509_39602} {RNA1509_39602, RNA815_52027}
5.	MligTC455_32488	11222	233.79	Mlig455_047280	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=-0.345	RPL37	1.684	-	0.715	-	-	0.969	-	Mlig455_047280 {REF} {Length: 477} {TRANSSPLICED} {Pfam: Ribosomal protein L37e [PF01907.21, score=94.8]} {Human: ENSG00000145592, RPL37, ribosomal protein L37, [RH, Score=124, Expect=4e-38]} {Mouse: ENSMUSG00000041841, Rpl37, ribosomal protein L37, [RH, Score=124, Expect=3e-38]} {Dmel: FBgn0030616, RpL37a, Ribosomal protein L37A, [RH, Score=133, Expect=5e-42]} {Celegans: WBGene00012179, W01D2.1, Ribosomal protein L37, [RH, Score=90.9, Expect=2e-25]} {Smed: dd_Smed_v6_97_0_1, dd_Smed_v6_97_0_1, [RH, Score=130, Expect=2e-41]} {RNA1509_14331, RNA1509_314} {RNA1310_75164, RNA1509_14331, RNA1509_314} {RNA1509_14331, RNA1509_314, RNA815_37099}
6.	MligTC455_35329	976	20.33	Mlig455_032927, Mlig455_032941, Mlig455_032974	Neo: Neoblast Age: -	TRMT10B, TRMT10C	0.973	-	-	-	-	0.973	-	Mlig455_032927 {REF} {Length: 2257} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=47.5]} {Human: ENSG00000174173, TRMT10C, tRNA methyltransferase 10C, mitochondrial RNase P subunit, [RH, Score=87.4, Expect=3e-18]} {Mouse: ENSMUSG00000044763, Trmt10c, tRNA methyltransferase 10C, [RH, Score=97.1, Expect=1e-21]} {Dmel: FBgn0031189, CG14618, [Score=56.6, Expect=1e-08]} {Celegans: WBGene00018513, F46F11.10, [RH, Score=63.9, Expect=5e-11]} {Smed: dd_Smed_v6_7440_0_1, dd_Smed_v6_7440_0_1, [RH, Score=99.4, Expect=4e-23]} {RNA1509_16123} {RNA1310_17315} {RNA815_2705} Mlig455_032941 {REF} {Length: 2257} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=47.7]} {Human: ENSG00000174173, TRMT10C, tRNA methyltransferase 10C, mitochondrial RNase P subunit, [RH, Score=87.8, Expect=2e-18]} {Mouse: ENSMUSG00000044763, Trmt10c, tRNA methyltransferase 10C, [RH, Score=97.8, Expect=6e-22]} {Dmel: FBgn0031189, CG14618, [Score=57.8, Expect=5e-09]} {Celegans: WBGene00018513, F46F11.10, [RH, Score=64.3, Expect=4e-11]} {Smed: dd_Smed_v6_7440_0_1, dd_Smed_v6_7440_0_1, [RH, Score=98.2, Expect=1e-22]} {RNA1509_16123} {RNA1310_17315} {RNA815_2705} Mlig455_032974 {REF} {Length: 2021} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=30.8]} {Human: ENSG00000165275, TRMT10B, tRNA methyltransferase 10B, [Score=56.2, Expect=2e-08]; ENSG00000174173, TRMT10C, tRNA methyltransferase 10C, mitochondrial RNase P subunit, [Score=53.5, Expect=2e-07]} {Mouse: ENSMUSG00000004127, Trmt10a, tRNA methyltransferase 10A, [Score=57.8, Expect=4e-09]; ENSMUSG00000044763, Trmt10c, tRNA methyltransferase 10C, [Score=57.4, Expect=9e-09]; ENSMUSG00000035601, Trmt10b, tRNA methyltransferase 10B, [Score=55.5, Expect=2e-08]} {Celegans: WBGene00018513, F46F11.10, [Score=47.4, Expect=7e-06]} {Smed: dd_Smed_v6_12052_0_1, dd_Smed_v6_12052_0_1, [Score=60.8, Expect=2e-10]} {RNA1509_16123} {RNA1310_17315} {RNA815_2705}
7.	MligTC455_09340	54	1.12	Mlig455_033453	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.184	FLOT1	0.971	-	-	-	-	0.971	-	Mlig455_033453 {REF} {Length: 2672} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=70.4]; Flotillin [PF15975.7, score=24.5]} {Human: ENSG00000232280, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000206379, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000137312, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000206480, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000230143, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]} {Mouse: ENSMUSG00000059714, Flot1, flotillin 1, [RH, Score=565, Expect=0.0]} {Dmel: FBgn0024754, Flo1, Flotillin 1, [RH, Score=586, Expect=0.0]} {Smed: dd_Smed_v6_1637_0_1, dd_Smed_v6_1637_0_1, [RH, Score=611, Expect=0.0]} {RNA1509_12353, RNA1509_14363} {RNA1310_17807.1, RNA1509_14363} {RNA1509_14363, RNA815_7706.1}
8.	MligTC455_32489	10703	222.99	Mlig455_047330	Neo: - Age: Up-Up-Up, logFC(26M/2M)=3.436	RPL37	0.967	-	-	-	-	0.967	-	Mlig455_047330 {REF} {Length: 357} {TRANSSPLICED} {Pfam: Ribosomal protein L37e [PF01907.21, score=92.5]; Double zinc ribbon domain [PF18912.2, score=18.5]} {Human: ENSG00000145592, RPL37, ribosomal protein L37, [Score=79.3, Expect=2e-21]} {Mouse: ENSMUSG00000041841, Rpl37, ribosomal protein L37, [Score=79.0, Expect=4e-21]} {Dmel: FBgn0030616, RpL37a, Ribosomal protein L37A, [Score=88.2, Expect=6e-25]} {Celegans: WBGene00012179, W01D2.1, Ribosomal protein L37, [Score=75.1, Expect=6e-20]} {Smed: dd_Smed_v6_97_0_1, dd_Smed_v6_97_0_1, [Score=89.0, Expect=2e-25]} {RNA1509_14331} {RNA1310_75164} {RNA815_37099}
9.	MligTC455_39696	1888	39.34	Mlig455_018061, Mlig455_018068, Mlig455_018086	Neo: Int S/G2/M Age: logFC(26M/2M)=0.284	NCLN	0.966	-	-	-	-	0.966	-	Mlig455_018061 {REF} {Length: 3868} {TRANSSPLICED} {Pfam: Peptidase family M28 [PF04389.19, score=24.9]} {Human: ENSG00000125912, NCLN, nicalin, [RH, Score=275, Expect=5e-85]} {Mouse: ENSMUSG00000020238, Ncln, nicalin, [RH, Score=281, Expect=9e-88]} {Dmel: FBgn0032217, CG4972, [RH, Score=184, Expect=3e-51]} {Celegans: WBGene00011488, nra-2, Nicalin, [RH, Score=143, Expect=1e-36]} {Smed: dd_Smed_v6_1389_0_1, dd_Smed_v6_1389_0_1, [RH, Score=250, Expect=1e-75]} {RNA1509_23534, RNA1509_39244, RNA1509_6378} {RNA1310_2924, RNA1509_23534, RNA1509_6378} {RNA1509_23534, RNA1509_6378, RNA815_4054} Mlig455_018068 {REF} {Length: 3873} {Pfam: Peptidase family M28 [PF04389.19, score=24.9]} {Human: ENSG00000125912, NCLN, nicalin, [RH, Score=275, Expect=5e-85]} {Mouse: ENSMUSG00000020238, Ncln, nicalin, [RH, Score=281, Expect=9e-88]} {Dmel: FBgn0032217, CG4972, [RH, Score=184, Expect=3e-51]} {Celegans: WBGene00011488, nra-2, Nicalin, [RH, Score=143, Expect=1e-36]} {Smed: dd_Smed_v6_1389_0_1, dd_Smed_v6_1389_0_1, [RH, Score=250, Expect=1e-75]} {RNA1509_39244} {RNA1310_2924} {RNA815_4054} Mlig455_018086 {REF} {Length: 3873} {Pfam: Peptidase family M28 [PF04389.19, score=24.9]} {Human: ENSG00000125912, NCLN, nicalin, [RH, Score=275, Expect=5e-85]} {Mouse: ENSMUSG00000020238, Ncln, nicalin, [RH, Score=281, Expect=9e-88]} {Dmel: FBgn0032217, CG4972, [RH, Score=184, Expect=3e-51]} {Celegans: WBGene00011488, nra-2, Nicalin, [RH, Score=143, Expect=1e-36]} {Smed: dd_Smed_v6_1389_0_1, dd_Smed_v6_1389_0_1, [RH, Score=250, Expect=1e-75]} {RNA1509_31141, RNA1509_39244, RNA1509_52954, RNA1509_60057} {RNA1310_2924, RNA1509_31141, RNA1509_39244, RNA1509_52954, RNA1509_60057} {RNA1509_31141, RNA1509_39244, RNA1509_52954, RNA1509_60057, RNA815_4054}
10.	MligTC455_37660	93	1.93	Mlig455_063445	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_063445 {REF} {Length: 2836} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_2938.1} {RNA815_14343.1}
11.	MligTC455_32065	360	7.5	Mlig455_047186	Neo: - Age: Up-Down-Down	SLC17A9	0.96	-	-	-	-	0.960	-	Mlig455_047186 {REF} {Length: 3386} {Pfam: Major Facilitator Superfamily [PF07690.18, score=149.1]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=303, Expect=1e-97]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=301, Expect=4e-97]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [Score=300, Expect=1e-96]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=313, Expect=5e-102]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [Score=394, Expect=3e-133]} {RNA1509_17119} {RNA1310_13718} {RNA815_7003}
12.	MligTC455_03966	1012	21.07	Mlig455_033186	Neo: Neoblast, stringent Age: logFC(26M/2M)=0.215 Region-enriched R5: 1.259/0.00071	NUTF2	0.959	-	-	-	-	0.959	-	Mlig455_033186 {REF} {Length: 1688} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=88.9]; Domain of unknown function (DUF4440) [PF14534.8, score=27.6]} {Human: ENSG00000102898, NUTF2, nuclear transport factor 2, [RH, Score=101, Expect=4e-28]} {Mouse: ENSMUSG00000071497, Nutf2-ps1, nuclear transport factor 2, pseudogene 1, [RH, Score=101, Expect=3e-28]; ENSMUSG00000008450, Nutf2, nuclear transport factor 2, [RH, Score=101, Expect=3e-28]} {Dmel: FBgn0032680, Ntf-2r, Nuclear transport factor-2-related, [RH, Score=102, Expect=7e-29]} {Smed: dd_Smed_v6_1606_0_1, dd_Smed_v6_1606_0_1, [RH, Score=138, Expect=2e-43]} {RNA1509_21207, RNA1509_9866} {RNA1310_23274, RNA1509_21207, RNA1509_9866} {RNA1509_21207, RNA1509_9866, RNA815_28192}
13.	MligTC455_25929	599	12.47	Mlig455_008569	Neo: - Age: -	GMPPB	0.959	-	-	-	-	0.959	-	Mlig455_008569 {REF} {Length: 4414} {TRANSSPLICED} {Pfam: Nucleotidyl transferase [PF00483.25, score=72.9]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=48.2]; Hexapeptide repeat of succinyl-transferase [PF14602.8, score=20.3]} {Human: ENSG00000173540, GMPPB, GDP-mannose pyrophosphorylase B, [Score=333, Expect=2e-114]} {Mouse: ENSMUSG00000070284, Gmppb, GDP-mannose pyrophosphorylase B, [Score=332, Expect=2e-114]} {Dmel: FBgn0037279, CG1129, [Score=330, Expect=2e-113]} {Celegans: WBGene00016583, tag-335, Mannose-1-phosphate guanyltransferase beta, [Score=303, Expect=6e-103]} {Smed: dd_Smed_v6_3771_0_1, dd_Smed_v6_3771_0_1, [Score=301, Expect=2e-102]} {RNA1509_16866, RNA1509_44160} {RNA1310_26477, RNA1509_16866, RNA1509_44160} {RNA1509_16866, RNA1509_44160, RNA815_6990.1}
14.	MligTC455_48250	988	20.58	Mlig455_035949	Neo: Int S/G2/M Age: -	COA7	0.958	-	-	-	-	0.958	-	Mlig455_035949 {REF} {Length: 1706} {TRANSSPLICED} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [RH, Score=61.6, Expect=1e-10]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [RH, Score=65.1, Expect=5e-12]} {Celegans: WBGene00013925, ZK20.4, Cytochrome c oxidase assembly factor 7 homolog, [RH, Score=66.6, Expect=7e-13]} {Smed: dd_Smed_v6_7923_0_1, dd_Smed_v6_7923_0_1, [RH, Score=73.9, Expect=1e-15]} {RNA1509_13019, RNA1509_3437} {RNA1310_27134, RNA1509_13019, RNA1509_3437} {RNA1509_13019, RNA1509_3437, RNA815_18869}
15.	MligTC455_28982	15213	316.93	Mlig455_025642	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.852		0.954	-	-	-	-	0.954	-	Mlig455_025642 {REF} {Length: 195} {NoTransDecoderORF} {RNA1509_892} {RNA1310_53106.5} {RNA815_11555.1}
16.	MligTC455_36506	10412	216.92	Mlig455_029859	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.265		0.951	-	-	-	-	0.951	-	Mlig455_029859 {REF} {Length: 711} {TRANSSPLICED} {Pfam: Cytochrome c oxidase subunit VIc [PF02937.17, score=46.2]} {Mouse: ENSMUSG00000014313, Cox6c, cytochrome c oxidase subunit 6C, [RH, Score=42.0, Expect=3e-06]} {RNA1509_4719} {RNA1310_50307} {RNA815_23793}
17.	MligTC455_15820	282	5.88	Mlig455_036593	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	0.950	-	Mlig455_036593 {REF} {Length: 3110} {RNA1509_54387, RNA1509_55696} {RNA1310_7156, RNA1509_54387, RNA1509_55696} {RNA1509_54387, RNA1509_55696, RNA815_2387.3}

Berezikov Lab - 2020-2021 © ERIBA