TomoSeq data search

Data search

Results for MligTC455_32484

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32484

7533

156.94

Mlig455_042986

Neo: Int S/G2/M

Age: Down-Down-Up

Region-enriched R4: 1.115/0.00345

RPS13

Mlig455_042986 {REF} {Length: 685} {TRANSSPLICED} {Pfam: Ribosomal S13/S15 N-terminal domain [PF08069.14, score=105.3]; Ribosomal protein S15 [PF00312.24, score=49.9]} {Human: ENSG00000110700, RPS13, ribosomal protein S13, [RH, Score=265, Expect=3e-92]} {Mouse: ENSMUSG00000090862, Rps13, ribosomal protein S13, [RH, Score=265, Expect=2e-92]} {Dmel: FBgn0010265, RpS13, Ribosomal protein S13, [RH, Score=254, Expect=4e-88]} {Celegans: WBGene00004482, rps-13, 40S ribosomal protein S13, [RH, Score=239, Expect=2e-82]} {Smed: dd_Smed_v6_360_0_1, dd_Smed_v6_360_0_1, [RH, Score=214, Expect=2e-72]} {RNA1509_6906} {RNA1310_52126} {RNA815_26208.2}

Cumulative graph for MligTC455_32484

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.299	7.384	0.00744	0.26094
RegionR2	-0.699	7.384	0.03510	0.21524
RegionR3	0.473	7.384	0.08155	0.50514
RegionR4	1.115	7.384	0.00025	0.00345
RegionR5	0.882	7.384	0.00065	0.00725
RegionR6	0.314	7.384	0.25076	0.83689
RegionR7	-0.099	7.384	0.72807	1.00000
RegionR8	-0.686	7.384	0.03925	0.38986

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.037	7.384	0.95135	1.00000
RegenerationR2	-0.483	7.384	0.16543	0.60340
RegenerationR3	-0.649	7.384	0.06604	0.43187
RegenerationR4	-0.536	7.384	0.14083	0.56311
RegenerationR5	-0.699	7.384	0.04443	0.34542
RegenerationR6	-0.475	7.384	0.18307	0.51885
RegenerationBL	-0.073	7.384	0.81816	1.00000
RegenerationTP	-0.01	7.384	0.97731	1.00000

Genes with expression patterns similar to MligTC455_32484

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32484	7533	156.94	Mlig455_042986	Neo: Int S/G2/M Age: Down-Down-Up Region-enriched R4: 1.115/0.00345	RPS13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042986 {REF} {Length: 685} {TRANSSPLICED} {Pfam: Ribosomal S13/S15 N-terminal domain [PF08069.14, score=105.3]; Ribosomal protein S15 [PF00312.24, score=49.9]} {Human: ENSG00000110700, RPS13, ribosomal protein S13, [RH, Score=265, Expect=3e-92]} {Mouse: ENSMUSG00000090862, Rps13, ribosomal protein S13, [RH, Score=265, Expect=2e-92]} {Dmel: FBgn0010265, RpS13, Ribosomal protein S13, [RH, Score=254, Expect=4e-88]} {Celegans: WBGene00004482, rps-13, 40S ribosomal protein S13, [RH, Score=239, Expect=2e-82]} {Smed: dd_Smed_v6_360_0_1, dd_Smed_v6_360_0_1, [RH, Score=214, Expect=2e-72]} {RNA1509_6906} {RNA1310_52126} {RNA815_26208.2}
2.	MligTC455_32485	7406	154.29	Mlig455_065341	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.267 Region-enriched R4: 1.100/0.00400	RPS13	5.982	0.989	1.000	0.998	0.999	0.999	0.997	Mlig455_065341 {REF} {Length: 682} {TRANSSPLICED} {Pfam: Ribosomal S13/S15 N-terminal domain [PF08069.14, score=105.3]; Ribosomal protein S15 [PF00312.24, score=49.9]} {Human: ENSG00000110700, RPS13, ribosomal protein S13, [RH, Score=265, Expect=3e-92]} {Mouse: ENSMUSG00000090862, Rps13, ribosomal protein S13, [RH, Score=265, Expect=2e-92]} {Dmel: FBgn0010265, RpS13, Ribosomal protein S13, [RH, Score=254, Expect=4e-88]} {Celegans: WBGene00004482, rps-13, 40S ribosomal protein S13, [RH, Score=239, Expect=2e-82]} {Smed: dd_Smed_v6_360_0_1, dd_Smed_v6_360_0_1, [RH, Score=214, Expect=2e-72]} {RNA1509_1269, RNA1509_2664, RNA1509_6906} {RNA1310_52126, RNA1509_1269, RNA1509_2664, RNA1509_6906} {RNA1509_1269, RNA1509_2664, RNA1509_6906, RNA815_26208.2}
3.	MligTC455_36670	7190	149.79	Mlig455_022898	Neo: Int S/G2/M Age: -		1.796	-	-	-	0.833	0.963	-	Mlig455_022898 {REF} {Length: 814} {TRANSSPLICED} {Pfam: Deltamethrin resistance [PF16020.7, score=24.4]} {RNA1509_17575, RNA1509_21523, RNA1509_29049, RNA1509_534, RNA1509_9567} {RNA1310_44846.1, RNA1509_17575, RNA1509_21523, RNA1509_29049, RNA1509_534, RNA1509_9567} {RNA1509_17575, RNA1509_21523, RNA1509_29049, RNA1509_534, RNA1509_9567, RNA815_21459}
4.	MligTC455_26902	17000	354.17	Mlig455_003959	Neo: Int S/G2/M Age: -	RPL13	0.954	-	-	-	-	-	0.954	Mlig455_003959 {REF} {Length: 804} {TRANSSPLICED} {Pfam: Ribosomal protein L13e [PF01294.20, score=249.9]} {Human: ENSG00000167526, RPL13, ribosomal protein L13, [RH, Score=217, Expect=2e-71]} {Mouse: ENSMUSG00000000740, Rpl13, ribosomal protein L13, [RH, Score=216, Expect=4e-71]} {Dmel: FBgn0011272, RpL13, Ribosomal protein L13, [RH, Score=216, Expect=3e-71]} {Celegans: WBGene00004425, rpl-13, 60S ribosomal protein L13, [RH, Score=180, Expect=3e-57]} {Smed: dd_Smed_v6_145_0_1, dd_Smed_v6_145_0_1, [RH, Score=192, Expect=3e-62]} {RNA1509_3214, RNA1509_3739, RNA1509_3869} {RNA1310_44525, RNA1509_3214, RNA1509_3739, RNA1509_3869} {RNA1509_3214, RNA1509_3739, RNA1509_3869, RNA815_21701.1}
5.	MligTC455_16359	283	5.89	Mlig455_000559	Neo: - Age: -	ZMPSTE24	0.95	-	-	-	-	-	0.950	Mlig455_000559 {REF} {Length: 5254} {TRANSSPLICED} {Pfam: CAAX prenyl protease N-terminal, five membrane helices [PF16491.7, score=198.3]; Peptidase family M48 [PF01435.20, score=147.3]; DEAD/DEAH box helicase [PF00270.31, score=83.0]; Helicase conserved C-terminal domain [PF00271.33, score=70.5]; Amidohydrolase family [PF01979.22, score=49.6]; Amidohydrolase family [PF07969.13, score=29.1]} {Human: ENSG00000084073, ZMPSTE24, zinc metallopeptidase STE24, [RH, Score=429, Expect=5e-137]} {Mouse: ENSMUSG00000043207, Zmpste24, zinc metallopeptidase, STE24, [RH, Score=440, Expect=2e-141]} {Dmel: FBgn0034176, ste24a, prenyl protease type I, [RH, Score=377, Expect=4e-118]} {Celegans: WBGene00001405, fce-1, CAAX prenyl protease 1 homolog, [RH, Score=376, Expect=4e-118]} {Smed: dd_Smed_v6_5271_0_1, dd_Smed_v6_5271_0_1, [RH, Score=436, Expect=3e-140]} {RNA1509_27788} {RNA1310_12834} {RNA815_2575}

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