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Results for MligTC455_32552

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32552 564 11.76 Mlig455_003080, Mlig455_062814

Neo: Irradiation

Age: -

 SHPRH

Mlig455_003080 {REF} {Length: 5428} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=41.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.2]; Cd27 binding protein (Siva) [PF05458.14, score=24.1]; zinc-RING finger domain [PF14634.8, score=23.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.0]} {Human: ENSG00000146414, SHPRH, SNF2 histone linker PHD RING helicase, [Score=301, Expect=2e-86]} {Mouse: ENSMUSG00000090112, Shprh, SNF2 histone linker PHD RING helicase, [Score=291, Expect=3e-83]} {Dmel: FBgn0035689, CG7376, [Score=171, Expect=9e-44]} {Celegans: WBGene00020235, T05A12.4, [Score=81.3, Expect=2e-15]} {Smed: dd_Smed_v6_2597_0_1, dd_Smed_v6_2597_0_1, [Score=77.4, Expect=2e-14]} {RNA1509_7429} {RNA1310_1418} {RNA815_929.1}

Mlig455_062814 {REF} {Length: 5419} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=196.3]; Helicase conserved C-terminal domain [PF00271.33, score=39.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.1]; PHD-finger [PF00628.31, score=24.6]; Ring finger domain [PF13639.8, score=24.1]; Cd27 binding protein (Siva) [PF05458.14, score=23.4]; zinc-RING finger domain [PF14634.8, score=20.5]} {Human: ENSG00000146414, SHPRH, SNF2 histone linker PHD RING helicase, [RH, Score=482, Expect=4e-143]} {Mouse: ENSMUSG00000090112, Shprh, SNF2 histone linker PHD RING helicase, [RH, Score=473, Expect=5e-140]} {Dmel: FBgn0035689, CG7376, [RH, Score=343, Expect=3e-97]} {Celegans: WBGene00020235, T05A12.4, [RH, Score=116, Expect=8e-26]} {Smed: dd_Smed_v6_2597_0_1, dd_Smed_v6_2597_0_1, [Score=77.8, Expect=5e-14]} {RNA1509_7429} {RNA1310_1418, RNA1509_7429} {RNA1509_7429, RNA815_929.1}

Cumulative graph for MligTC455_32552

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.093 4.013 0.94020 1.00000
RegionR2 -0.341 4.013 0.57561 0.93319
RegionR3 -0.143 4.013 0.75181 1.00000
RegionR4 0.355 4.013 0.54962 0.87043
RegionR5 0.599 4.013 0.10694 0.31963
RegionR6 -0.584 4.013 0.19926 0.76979
RegionR7 -0.499 4.013 0.40605 1.00000
RegionR8 0.52 4.013 0.37975 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.899 4.013 0.37218 1.00000
RegenerationR2 0.666 4.013 0.18633 0.62903
RegenerationR3 0.094 4.013 0.86855 1.00000
RegenerationR4 0.286 4.013 0.62359 0.92183
RegenerationR5 -0.282 4.013 0.58992 0.90565
RegenerationR6 0.191 4.013 0.74351 0.94893
RegenerationBL -0.612 4.013 0.49849 0.86363
RegenerationTP 0.079 4.013 0.90591 1.00000


Genes with expression patterns similar to MligTC455_32552

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32552 564 11.76 Mlig455_003080, Mlig455_062814

Neo: Irradiation

Age: -

 SHPRH 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_003080 {REF} {Length: 5428} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=41.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.2]; Cd27 binding protein (Siva) [PF05458.14, score=24.1]; zinc-RING finger domain [PF14634.8, score=23.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.0]} {Human: ENSG00000146414, SHPRH, SNF2 histone linker PHD RING helicase, [Score=301, Expect=2e-86]} {Mouse: ENSMUSG00000090112, Shprh, SNF2 histone linker PHD RING helicase, [Score=291, Expect=3e-83]} {Dmel: FBgn0035689, CG7376, [Score=171, Expect=9e-44]} {Celegans: WBGene00020235, T05A12.4, [Score=81.3, Expect=2e-15]} {Smed: dd_Smed_v6_2597_0_1, dd_Smed_v6_2597_0_1, [Score=77.4, Expect=2e-14]} {RNA1509_7429} {RNA1310_1418} {RNA815_929.1}

Mlig455_062814 {REF} {Length: 5419} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=196.3]; Helicase conserved C-terminal domain [PF00271.33, score=39.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.1]; PHD-finger [PF00628.31, score=24.6]; Ring finger domain [PF13639.8, score=24.1]; Cd27 binding protein (Siva) [PF05458.14, score=23.4]; zinc-RING finger domain [PF14634.8, score=20.5]} {Human: ENSG00000146414, SHPRH, SNF2 histone linker PHD RING helicase, [RH, Score=482, Expect=4e-143]} {Mouse: ENSMUSG00000090112, Shprh, SNF2 histone linker PHD RING helicase, [RH, Score=473, Expect=5e-140]} {Dmel: FBgn0035689, CG7376, [RH, Score=343, Expect=3e-97]} {Celegans: WBGene00020235, T05A12.4, [RH, Score=116, Expect=8e-26]} {Smed: dd_Smed_v6_2597_0_1, dd_Smed_v6_2597_0_1, [Score=77.8, Expect=5e-14]} {RNA1509_7429} {RNA1310_1418, RNA1509_7429} {RNA1509_7429, RNA815_929.1}
2. MligTC455_54086 101 2.11 Mlig455_006583, Mlig455_006693, Mlig455_006744

Neo: -

Age: -

 CACNA2D1, CACNA2D2 0.966 - - 0.966 - - -

Mlig455_006583 {REF} {Length: 4206} {Pfam: VWA N-terminal [PF08399.13, score=65.5]; Cache domain [PF02743.20, score=54.1]; von Willebrand factor type A domain [PF13519.8, score=35.8]; von Willebrand factor type A domain [PF00092.30, score=33.2]; von Willebrand factor type A domain [PF13768.8, score=26.9]} {Human: ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [Score=169, Expect=5e-42]; ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=168, Expect=1e-41]; ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=164, Expect=2e-40]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [Score=171, Expect=1e-42]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [Score=169, Expect=3e-42]; ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=166, Expect=4e-41]} {Dmel: FBgn0028863, CG4587, [Score=146, Expect=5e-35]} {Celegans: WBGene00007041, tag-180, [Score=98.6, Expect=1e-20]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [RH, Score=1425, Expect=0.0]} {RNA1509_47212} {RNA1310_2302} {RNA815_5037}

Mlig455_006693 {REF} {Length: 4381} {Pfam: VWA N-terminal [PF08399.13, score=64.3]; Cache domain [PF02743.20, score=55.6]; von Willebrand factor type A domain [PF13519.8, score=35.8]; von Willebrand factor type A domain [PF00092.30, score=33.2]; von Willebrand factor type A domain [PF13768.8, score=26.9]} {Human: ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=169, Expect=8e-42]; ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [Score=169, Expect=5e-42]; ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=166, Expect=8e-41]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [Score=171, Expect=7e-43]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [Score=169, Expect=5e-42]; ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=167, Expect=2e-41]} {Dmel: FBgn0028863, CG4587, [Score=146, Expect=4e-35]} {Celegans: WBGene00007041, tag-180, [Score=98.6, Expect=2e-20]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [RH, Score=1422, Expect=0.0]} {RNA1509_47212} {RNA1310_2302, RNA1509_47212} {RNA1509_47212, RNA815_5037}

Mlig455_006744 {REF} {Length: 4200} {Pfam: VWA N-terminal [PF08399.13, score=65.5]; Cache domain [PF02743.20, score=54.1]; von Willebrand factor type A domain [PF13519.8, score=35.8]; von Willebrand factor type A domain [PF00092.30, score=33.2]; von Willebrand factor type A domain [PF13768.8, score=26.9]} {Human: ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [Score=169, Expect=6e-42]; ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=168, Expect=1e-41]; ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=164, Expect=2e-40]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [Score=171, Expect=2e-42]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [Score=169, Expect=3e-42]; ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=166, Expect=4e-41]} {Dmel: FBgn0028863, CG4587, [Score=146, Expect=5e-35]} {Celegans: WBGene00007041, tag-180, [Score=98.6, Expect=1e-20]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [RH, Score=1425, Expect=0.0]} {RNA1509_47212} {RNA1310_2302} {RNA815_5037}
3. MligTC455_02987 191 3.98 Mlig455_029873, Mlig455_063943

Neo: -

Age: -

 0.961 - - 0.961 - - -

Mlig455_029873 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_58236} {RNA1310_8943} {RNA815_17300}

Mlig455_063943 {REF} {Length: 2144} {RNA1509_58236} {RNA1310_8943} {RNA815_17300}
4. MligTC455_09018 292 6.08 Mlig455_014490, Mlig455_014509, Mlig455_054440

Neo: -

Age: -

 0.957 - - 0.957 - - -

Mlig455_014490 {REF} {Length: 2182} {RNA1509_36919} {RNA1310_69131} {RNA815_36781}

Mlig455_014509 {REF} {Length: 2307} {RNA1509_36919} {RNA1310_69131} {RNA815_36781}

Mlig455_054440 {REF} {Length: 2592} {NoTransDecoderORF} {RNA1509_36919} {RNA1310_69131} {RNA815_36781}
5. MligTC455_31736 229 4.77 Mlig455_005581

Neo: -

Age: -

 AC006059.2 0.955 - - - 0.955 - - Mlig455_005581 {REF} {Length: 3051} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4164) [PF13747.8, score=18.9]} {Human: ENSG00000280571, AC006059.2, novel transcript, [Score=165, Expect=1e-42]; ENSG00000244607, CCDC13, coiled-coil domain containing 13, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000079235, Ccdc13, coiled-coil domain containing 13, [Score=142, Expect=3e-35]} {Smed: dd_Smed_v6_12055_0_1, dd_Smed_v6_12055_0_1, [Score=162, Expect=7e-43]} {RNA1509_34806} {RNA1310_11271} {RNA815_3539}
6. MligTC455_41290 435 9.06 Mlig455_005154, Mlig455_021616

Neo: -

Age: -

 0.954 - - 0.954 - - -

Mlig455_005154 {REF} {Length: 3470} {TRANSSPLICED} {RNA1509_11738} {RNA1310_5198, RNA1509_11738} {RNA1509_11738, RNA815_1812}

Mlig455_021616 {REF} {Length: 3484} {TRANSSPLICED} {RNA1509_11738, RNA1509_30879} {RNA1310_5198, RNA1509_30879} {RNA1509_30879, RNA815_1812}
7. MligTC455_20925 83 1.72 Mlig455_006654

Neo: -

Age: -

 0.95 - - - 0.950 - - Mlig455_006654 {REF} {Length: 440} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_94743} {RNA815_50988}

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