TomoSeq data search

Data search

Results for MligTC455_32553

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32553

7755

161.56

Mlig455_004397, Mlig455_037220

Neo: -

Age: Down-Up-Up

Mlig455_004397 {REF} {Length: 2054} {Pfam: PLAC8 family [PF04749.19, score=43.2]} {Smed: dd_Smed_v6_1291_0_1, dd_Smed_v6_1291_0_1, [Score=47.0, Expect=4e-08]} {RNA1509_10872} {RNA1310_30304} {RNA815_27696.1}

Mlig455_037220 {REF} {Length: 856} {Pfam: PLAC8 family [PF04749.19, score=72.2]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=94.0, Expect=3e-26]} {RNA1509_10872, RNA1509_8967} {RNA1310_39998, RNA1509_10872, RNA1509_8967} {RNA1509_10872, RNA1509_8967, RNA815_27696.1}

Cumulative graph for MligTC455_32553

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.68	7.366	0.00116	0.11116
RegionR2	0.22	7.366	0.43137	0.82159
RegionR3	0.527	7.366	0.02737	0.28267
RegionR4	0.991	7.366	0.00050	0.00596
RegionR5	-0.277	7.366	0.26924	0.59345
RegionR6	0.091	7.366	0.71281	1.00000
RegionR7	0.104	7.366	0.68652	1.00000
RegionR8	0.025	7.366	0.93047	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.723	7.366	0.26570	0.97007
RegenerationR2	0.025	7.366	0.93200	1.00000
RegenerationR3	-0.123	7.366	0.68429	0.94143
RegenerationR4	0.111	7.366	0.72520	0.96327
RegenerationR5	0.315	7.366	0.30006	0.72711
RegenerationR6	-0.121	7.366	0.69624	0.92232
RegenerationBL	0.583	7.366	0.02816	0.18610
RegenerationTP	0.352	7.366	0.23294	0.67828

Genes with expression patterns similar to MligTC455_32553

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32553	7755	161.56	Mlig455_004397, Mlig455_037220	Neo: - Age: Down-Up-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004397 {REF} {Length: 2054} {Pfam: PLAC8 family [PF04749.19, score=43.2]} {Smed: dd_Smed_v6_1291_0_1, dd_Smed_v6_1291_0_1, [Score=47.0, Expect=4e-08]} {RNA1509_10872} {RNA1310_30304} {RNA815_27696.1} Mlig455_037220 {REF} {Length: 856} {Pfam: PLAC8 family [PF04749.19, score=72.2]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=94.0, Expect=3e-26]} {RNA1509_10872, RNA1509_8967} {RNA1310_39998, RNA1509_10872, RNA1509_8967} {RNA1509_10872, RNA1509_8967, RNA815_27696.1}
2.	MligTC455_30748	195	4.07	Mlig455_027632	Neo: - Age: logFC(26M/2M)=-0.475		1.739	-	-	-	0.774	0.965	-	Mlig455_027632 {REF} {Length: 1229} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=40.1]; Ankyrin repeats (many copies) [PF13637.8, score=28.1]; Ankyrin repeat [PF13606.8, score=23.5]; Ankyrin repeat [PF00023.32, score=21.0]; Ankyrin repeats (many copies) [PF13857.8, score=20.3]} {RNA1509_11072} {RNA1310_4205} {RNA815_478}
3.	MligTC455_22566	618	12.87	Mlig455_006547	Neo: - Age: Up-Down-Down Region-enriched R2: 2.644/0.01813	TRPM3	1.736	-	0.779	0.957	-	-	-	Mlig455_006547 {REF} {Length: 5791} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=96.5]; Ankyrin repeats (3 copies) [PF12796.9, score=81.0]; Ankyrin repeats (many copies) [PF13857.8, score=55.6]; Ankyrin repeat [PF13606.8, score=54.7]; Ankyrin repeat [PF00023.32, score=52.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=102, Expect=3e-21]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=102, Expect=3e-21]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=100, Expect=7e-21]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=63.5, Expect=1e-09]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=105, Expect=8e-23]} {RNA1509_11229, RNA1509_25684, RNA1509_37377} {RNA1310_987, RNA1509_25684, RNA1509_37377} {RNA1509_25684, RNA1509_37377, RNA815_3324}
4.	MligTC455_31744	756	15.76	Mlig455_063640, Mlig455_063642, Mlig455_063643, Mlig455_063644	Neo: - Age: - Region-enriched R4: 1.348/0.02100		1.709	-	-	0.755	0.954	-	-	Mlig455_063640 {REF} {Length: 789} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [Score=53.1, Expect=9e-09]} {RNA1509_42493} {RNA1310_2930} {RNA815_5886.1} Mlig455_063642 {REF} {Length: 3154} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=57.0]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=21.8]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [RH, Score=148, Expect=4e-41]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273} Mlig455_063643 {REF} {Length: 2392} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.7]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=19.7]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=131, Expect=3e-35]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273} Mlig455_063644 {REF} {Length: 2767} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=56.9]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=20.6]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [RH, Score=149, Expect=2e-41]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273}
5.	MligTC455_46529	692	14.42	Mlig455_054017	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.873		1.691	-	-	0.953	0.738	-	-	Mlig455_054017 {REF} {Length: 2639} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=26.7]; Lectin C-type domain [PF00059.23, score=25.4]} {RNA1509_3972} {RNA1310_6232} {RNA815_6166}
6.	MligTC455_54077	937	19.53	Mlig455_032159, Mlig455_032165	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.640	TLL2	0.977	-	-	-	0.977	-	-	Mlig455_032159 {REF} {Length: 1358} {RNA1509_9300} {RNA1310_18452} {RNA815_8451} Mlig455_032165 {REF} {Length: 1696} {Pfam: CUB domain [PF00431.22, score=63.7]} {Human: ENSG00000095587, TLL2, tolloid like 2, [Score=62.8, Expect=4e-10]; ENSG00000107611, CUBN, cubilin, [Score=62.0, Expect=1e-09]; ENSG00000038295, TLL1, tolloid like 1, [Score=61.2, Expect=1e-09]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=68.9, Expect=4e-12]} {Dmel: FBgn0004885, tok, tolkin, [Score=58.2, Expect=8e-09]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=61.2, Expect=4e-10]} {RNA1509_9300} {RNA1310_18452} {RNA815_8451}
7.	MligTC455_17921	88	1.83	Mlig455_056776	Neo: - Age: -		0.958	-	-	0.958	-	-	-	Mlig455_056776 {REF} {Length: 264} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36476} {RNA1310_26491.2} {RNA815_8938.1}
8.	MligTC455_26501	549	11.43	Mlig455_067644	Neo: - Age: Down-Down-Up Region-enriched R2: 1.808/0.01808	DNAH10	0.95	-	-	0.950	-	-	-	Mlig455_067644 {REF} {Length: 5057} {Pfam: ATP-binding dynein motor region [PF12781.9, score=99.8]; Dynein heavy chain C-terminal domain [PF18199.3, score=96.3]; Dynein heavy chain AAA lid domain [PF18198.3, score=37.7]; Microtubule-binding stalk of dynein motor [PF12777.9, score=18.4]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [Score=143, Expect=2e-33]; ENSG00000197653, DNAH10, dynein axonemal heavy chain 10, [Score=142, Expect=3e-33]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=136, Expect=2e-31]} {Dmel: FBgn0039510, CG3339, [Score=115, Expect=2e-25]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=60.5, Expect=1e-08]} {Smed: dd_Smed_v6_4113_0_1, dd_Smed_v6_4113_0_1, [Score=532, Expect=1e-159]} {RNA1509_2294} {RNA1310_872.1} {RNA815_291}
9.	MligTC455_51052	19	0.39	Mlig455_061528	Neo: - Age: Up-Down-Up		0.95	-	-	0.950	-	-	-	Mlig455_061528 {REF} {Length: 1579} {RNA1310_32253}

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