Data search


search
Exact
Search

Results for MligTC455_32581

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32581 273 5.69 Mlig455_033243

Neo: Int S/G2/M

Age: -

Mlig455_033243 {REF} {Length: 624} {NoTransDecoderORF} {RNA1509_45487} {RNA1310_55429.1} {RNA815_54593.1}

Cumulative graph for MligTC455_32581

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.232 2.77 0.07051 0.59515
RegionR2 -0.196 2.77 0.78371 1.00000
RegionR3 0.185 2.77 0.74107 1.00000
RegionR4 -0.387 2.77 0.59632 0.90995
RegionR5 -0.119 2.77 0.81849 1.00000
RegionR6 -0.699 2.77 0.23492 0.81850
RegionR7 -1.714 2.77 0.05411 0.44768
RegionR8 0.697 2.77 0.38478 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.374 2.77 0.43349 1.00000
RegenerationR2 -0.599 2.77 0.37429 0.79798
RegenerationR3 -0.657 2.77 0.34087 0.76463
RegenerationR4 -0.129 2.77 0.85796 1.00000
RegenerationR5 -0.391 2.77 0.54101 0.88085
RegenerationR6 -0.112 2.77 0.88508 1.00000
RegenerationBL -0.894 2.77 0.42029 0.78861
RegenerationTP -1.911 2.77 0.11201 0.51455


Genes with expression patterns similar to MligTC455_32581

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32581 273 5.69 Mlig455_033243

Neo: Int S/G2/M

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_033243 {REF} {Length: 624} {NoTransDecoderORF} {RNA1509_45487} {RNA1310_55429.1} {RNA815_54593.1}
2. MligTC455_54190 623 12.97 Mlig455_052767

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.540/0.00327

KMT5A 0.972 - - 0.972 - - - Mlig455_052767 {REF} {Length: 2990} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=60.5]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [RH, Score=165, Expect=7e-48]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [RH, Score=165, Expect=2e-48]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [RH, Score=167, Expect=2e-46]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [RH, Score=149, Expect=4e-43]} {Smed: dd_Smed_v6_5677_0_2, dd_Smed_v6_5677_0_2, [RH, Score=183, Expect=4e-56]} {RNA1509_38432} {RNA1310_27674.1, RNA1509_38432} {RNA1509_38432, RNA815_13723}
3. MligTC455_12252 153 3.18 Mlig455_007987

Neo: -

Age: -

0.968 - - 0.968 - - - Mlig455_007987 {REF} {Length: 516} {NoTransDecoderORF} {RNA1509_52260} {RNA1310_51099}
4. MligTC455_42488 374 7.79 Mlig455_046417

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.582

0.965 - - 0.965 - - - Mlig455_046417 {REF} {Length: 2572} {Smed: dd_Smed_v6_12856_0_1, dd_Smed_v6_12856_0_1, [RH, Score=107, Expect=4e-27]} {RNA1509_33429, RNA1509_6433} {RNA1310_24046, RNA1509_33429} {RNA1509_33429, RNA815_8453}
5. MligTC455_26668 406 8.46 Mlig455_011365

Neo: -

Age: -

Regeneration-upregulated BL: 6.270

Regeneration-enriched BL: 6.270

0.963 - - 0.963 - - - Mlig455_011365 {REF} {Length: 3699} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=20.7]} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857}
6. MligTC455_19562 303 6.31 Mlig455_051672

Neo: Int S/G2/M

Age: -

MRPL39 0.961 - - 0.961 - - - Mlig455_051672 {REF} {Length: 2063} {TRANSSPLICED} {Pfam: TGS domain [PF02824.23, score=33.0]} {Human: ENSG00000154719, MRPL39, mitochondrial ribosomal protein L39, [RH, Score=180, Expect=7e-53]} {Mouse: ENSMUSG00000022889, Mrpl39, mitochondrial ribosomal protein L39, [RH, Score=189, Expect=1e-56]} {Dmel: FBgn0036462, mRpL39, mitochondrial ribosomal protein L39, [RH, Score=196, Expect=2e-59]} {Smed: dd_Smed_v6_7576_0_1, dd_Smed_v6_7576_0_1, [RH, Score=187, Expect=3e-56]} {RNA1509_38126, RNA1509_47333, RNA1509_9497} {RNA1310_16310, RNA1509_38126, RNA1509_47333} {RNA1509_38126, RNA1509_47333, RNA815_7406}
7. MligTC455_53873 315 6.57 Mlig455_031286

Neo: -

Age: Down-Down-Up

Region-enriched R5: 2.452/0.00042
Region-enriched R4: 2.381/0.02290

TPMT 0.957 - - - - - 0.957 Mlig455_031286 {REF} {Length: 1329} {TRANSSPLICED} {Pfam: Thiopurine S-methyltransferase (TPMT) [PF05724.13, score=127.5]} {Human: ENSG00000137364, TPMT, thiopurine S-methyltransferase, [RH, Score=94.7, Expect=6e-23]} {Mouse: ENSMUSG00000021376, Tpmt, thiopurine methyltransferase, [RH, Score=90.9, Expect=1e-21]} {Smed: dd_Smed_v6_21433_0_1, dd_Smed_v6_21433_0_1, [RH, Score=90.1, Expect=7e-22]} {RNA1509_48062} {RNA1310_27111.1} {RNA815_28412}
8. MligTC455_22672 428 8.92 Mlig455_040076

Neo: -

Age: Down-Up-Up

0.956 - - 0.956 - - - Mlig455_040076 {REF} {Length: 1708} {RNA1509_55358} {RNA1310_8394} {RNA815_1882}
9. MligTC455_15995 496 10.34 Mlig455_003038, Mlig455_022804, Mlig455_038213, Mlig455_047501, Mlig455_055835

Neo: -

Age: -

Regeneration-enriched BL: 7.204
Regeneration-enriched R6: 4.322

0.955 - - 0.955 - - -

Mlig455_003038 {REF} {Length: 546} {NoTransDecoderORF} {RNA1509_52793} {RNA1310_66178.2} {RNA815_35077}

Mlig455_022804 {REF} {Length: 505} {NoTransDecoderORF} {RNA1310_91917}

Mlig455_038213 {REF} {Length: 231} {NoTransDecoderORF} {RNA1310_66178.2}

Mlig455_047501 {REF} {Length: 718} {NoTransDecoderORF} {RNA1310_66178.2}

Mlig455_055835 {REF} {Length: 401} {RNA1310_66178.2}
10. MligTC455_17031 210 4.37 Mlig455_041608

Neo: -

Age: -

SMG8 0.955 - - 0.955 - - - Mlig455_041608 {REF} {Length: 3518} {TRANSSPLICED} {Pfam: Smg8_Smg9 [PF10220.11, score=470.8]} {Human: ENSG00000167447, SMG8, SMG8, nonsense mediated mRNA decay factor, [RH, Score=263, Expect=8e-74]} {Mouse: ENSMUSG00000020495, Smg8, smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans), [RH, Score=180, Expect=5e-46]} {Dmel: FBgn0032296, CG6729, [RH, Score=117, Expect=2e-26]} {Celegans: WBGene00010551, smg-8, Suppressor with Morphological effect on Genitalia, [RH, Score=166, Expect=5e-42]} {Smed: dd_Smed_v6_5738_0_2, dd_Smed_v6_5738_0_2, [RH, Score=285, Expect=4e-82]} {RNA1509_27641, RNA1509_41191} {RNA1310_5817.1, RNA1509_27641, RNA1509_41191} {RNA1509_27641, RNA1509_41191, RNA815_3402}
11. MligTC455_35405 975 20.3 Mlig455_057162

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_057162 {REF} {Length: 816} {NoTransDecoderORF} {RNA1509_25928} {RNA1310_1825.1} {RNA815_753.1}
12. MligTC455_22388 80 1.67 Mlig455_017679

Neo: -

Age: Down-Down-Up

Region-enriched R4: 4.259/0.04911

0.953 - - 0.953 - - - Mlig455_017679 {REF} {Length: 1025} {RNA1509_24536} {RNA1310_18791} {RNA815_27424}
13. MligTC455_35404 997 20.77 Mlig455_000846

Neo: -

Age: -

MAPK8IP3 0.951 - - - - 0.951 - Mlig455_000846 {REF} {Length: 3028} {Pfam: WD40 repeated domain [PF19056.2, score=111.4]; JNK-interacting protein leucine zipper II [PF16471.7, score=93.6]} {Human: ENSG00000138834, MAPK8IP3, mitogen-activated protein kinase 8 interacting protein 3, [RH, Score=322, Expect=1e-93]; ENSG00000008294, SPAG9, sperm associated antigen 9, [RH, Score=313, Expect=2e-90]} {Mouse: ENSMUSG00000024163, Mapk8ip3, mitogen-activated protein kinase 8 interacting protein 3, [RH, Score=515, Expect=6e-165]} {Dmel: FBgn0024187, syd, sunday driver, [RH, Score=491, Expect=8e-157]} {Celegans: WBGene00006755, unc-16, JNK-interacting protein, [RH, Score=449, Expect=2e-141]} {Smed: dd_Smed_v6_3798_0_2, dd_Smed_v6_3798_0_2, [RH, Score=320, Expect=9e-95]} {RNA1509_5595} {RNA1310_1825.1} {RNA815_753.1}
14. MligTC455_51897 342 7.12 Mlig455_008969

Neo: -

Age: -

GCNT1 0.951 - - 0.951 - - - Mlig455_008969 {REF} {Length: 2267} {Pfam: Core-2/I-Branching enzyme [PF02485.23, score=142.1]} {Human: ENSG00000187210, GCNT1, glucosaminyl (N-acetyl) transferase 1, core 2, [RH, Score=191, Expect=1e-54]} {Mouse: ENSMUSG00000038843, Gcnt1, glucosaminyl (N-acetyl) transferase 1, core 2, [RH, Score=188, Expect=1e-53]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=79.7, Expect=3e-15]} {Celegans: WBGene00001626, gly-1, GLY-1; GLYcosylation related, [RH, Score=141, Expect=2e-36]} {Smed: dd_Smed_v6_6205_0_4, dd_Smed_v6_6205_0_4, [RH, Score=259, Expect=1e-81]} {RNA1509_14691} {RNA1310_16962} {RNA815_6581.1}
15. MligTC455_26752 385 8.01 Mlig455_008992

Neo: -

Age: -

TCF7L1 0.95 - - 0.950 - - - Mlig455_008992 {REF} {Length: 5247} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=76.2]; HMG-box domain [PF09011.12, score=32.7]} {Human: ENSG00000152284, TCF7L1, transcription factor 7 like 1, [RH, Score=148, Expect=1e-37]; ENSG00000138795, LEF1, lymphoid enhancer binding factor 1, [RH, Score=145, Expect=6e-38]} {Mouse: ENSMUSG00000055799, Tcf7l1, transcription factor 7 like 1 (T cell specific, HMG box), [RH, Score=149, Expect=3e-38]; ENSMUSG00000027985, Lef1, lymphoid enhancer binding factor 1, [RH, Score=145, Expect=3e-38]} {Dmel: FBgn0085432, pan, pangolin, [RH, Score=150, Expect=5e-38]} {Celegans: WBGene00004077, pop-1, [RH, Score=108, Expect=4e-25]} {Smed: dd_Smed_v6_9140_0_1, dd_Smed_v6_9140_0_1, [RH, Score=157, Expect=1e-40]} {RNA1509_11661} {RNA1310_5451.3, RNA1509_11661} {RNA1509_11661, RNA815_18426}
16. MligTC455_35962 331 6.9 Mlig455_022661

Neo: -

Age: -

0.95 - - 0.950 - - - Mlig455_022661 {REF} {Length: 220} {NoTransDecoderORF} {RNA1509_19906} {RNA1310_19437} {RNA815_21043}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA