Data search


search
Exact
Search

Results for MligTC455_32625

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32625 12 0.25 Mlig455_049643

Neo: -

Age: Up-Down-Down

Mlig455_049643 {REF} {Length: 2041} {RNA1509_22587} {RNA1310_21628} {RNA815_5684.1}

Cumulative graph for MligTC455_32625

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_32625

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32625 12 0.25 Mlig455_049643

Neo: -

Age: Up-Down-Down

1 - 1.000 - - - - Mlig455_049643 {REF} {Length: 2041} {RNA1509_22587} {RNA1310_21628} {RNA815_5684.1}
2. MligTC455_00713 15 0.3 Mlig455_024702

Neo: -

Age: -

Region-enriched R4: 3.868/0.02264

0.996 - 0.996 - - - - Mlig455_024702 {REF} {Length: 892} {RNA1509_42092} {RNA1310_32310.1}
3. MligTC455_07284 24 0.5 Mlig455_027672, Mlig455_047728, Mlig455_047735, Mlig455_049653

Neo: Germline

Age: -

SALL2, ZFAT 0.995 - 0.995 - - - -

Mlig455_027672 {REF} {Length: 1148} {Pfam: C2H2-type zinc finger [PF13894.8, score=34.2]; Zinc finger, C2H2 type [PF00096.28, score=31.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.5]} {Human: ENSG00000066827, ZFAT, zinc finger and AT-hook domain containing, [Score=62.0, Expect=3e-10]} {Mouse: ENSMUSG00000022335, Zfat, zinc finger and AT hook domain containing, [Score=58.9, Expect=2e-09]; ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=56.6, Expect=1e-08]} {Dmel: FBgn0000287, salr, spalt-related, [Score=50.8, Expect=7e-07]} {Smed: dd_Smed_v6_13753_0_1, dd_Smed_v6_13753_0_1, [Score=53.5, Expect=6e-08]} {RNA1310_30902} {RNA815_35488}

Mlig455_047728 {REF} {Length: 1143} {Pfam: C2H2-type zinc finger [PF13894.8, score=34.2]; Zinc finger, C2H2 type [PF00096.28, score=31.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.5]} {Human: ENSG00000066827, ZFAT, zinc finger and AT-hook domain containing, [Score=62.0, Expect=4e-10]} {Mouse: ENSMUSG00000022335, Zfat, zinc finger and AT hook domain containing, [Score=58.9, Expect=3e-09]; ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=56.6, Expect=2e-08]} {Dmel: FBgn0000287, salr, spalt-related, [Score=50.8, Expect=7e-07]} {Smed: dd_Smed_v6_13753_0_1, dd_Smed_v6_13753_0_1, [Score=53.1, Expect=7e-08]} {RNA1310_30902} {RNA815_35488}

Mlig455_047735 {REF} {Length: 1143} {Pfam: C2H2-type zinc finger [PF13894.8, score=34.2]; Zinc finger, C2H2 type [PF00096.28, score=31.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.5]} {Human: ENSG00000066827, ZFAT, zinc finger and AT-hook domain containing, [Score=62.0, Expect=4e-10]} {Mouse: ENSMUSG00000022335, Zfat, zinc finger and AT hook domain containing, [Score=58.9, Expect=3e-09]; ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=56.6, Expect=2e-08]} {Dmel: FBgn0000287, salr, spalt-related, [Score=50.8, Expect=7e-07]} {Smed: dd_Smed_v6_13753_0_1, dd_Smed_v6_13753_0_1, [Score=53.1, Expect=7e-08]} {RNA1310_30902} {RNA815_35488}

Mlig455_049653 {REF} {Length: 633} {Pfam: C2H2-type zinc finger [PF13894.8, score=28.2]; Zinc finger, C2H2 type [PF00096.28, score=25.8]} {Human: ENSG00000165821, SALL2, spalt like transcription factor 2, [Score=52.4, Expect=9e-08]; ENSG00000101115, SALL4, spalt like transcription factor 4, [Score=52.4, Expect=8e-08]; ENSG00000066827, ZFAT, zinc finger and AT-hook domain containing, [Score=50.4, Expect=4e-07]} {Mouse: ENSMUSG00000027547, Sall4, spalt like transcription factor 4, [Score=52.8, Expect=5e-08]; ENSMUSG00000049532, Sall2, spalt like transcription factor 2, [Score=52.4, Expect=5e-08]} {Dmel: FBgn0000287, salr, spalt-related, [Score=50.1, Expect=3e-07]} {Smed: dd_Smed_v6_13753_0_1, dd_Smed_v6_13753_0_1, [Score=53.5, Expect=9e-09]} {RNA1310_30902} {RNA815_32238}
4. MligTC455_08158 7 0.15 Mlig455_051776

Neo: -

Age: -

ECE1 0.994 - 0.994 - - - - Mlig455_051776 {REF} {Length: 2291} {Pfam: Peptidase family M13 [PF01431.23, score=30.2]} {Human: ENSG00000117298, ECE1, endothelin converting enzyme 1, [Score=53.1, Expect=7e-07]} {Mouse: ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=54.7, Expect=2e-07]; ENSMUSG00000057530, Ece1, endothelin converting enzyme 1, [Score=53.1, Expect=5e-07]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=59.7, Expect=3e-09]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=48.9, Expect=5e-06]} {Smed: dd_Smed_v6_1910_0_1, dd_Smed_v6_1910_0_1, [Score=50.4, Expect=1e-06]} {RNA1509_44830} {RNA1310_8816} {RNA815_10690}
5. MligTC455_53149 35 0.73 Mlig455_028208

Neo: -

Age: -

0.994 - 0.994 - - - - Mlig455_028208 {REF} {Length: 2344} {RNA1509_40765} {RNA1310_47463} {RNA815_27999}
6. MligTC455_36024 28 0.59 Mlig455_055284, Mlig455_055330

Neo: -

Age: -

0.992 - 0.992 - - - -

Mlig455_055284 {REF} {Length: 1451} {RNA1509_29082} {RNA1310_61099} {RNA815_29618}

Mlig455_055330 {REF} {Length: 1771} {RNA1509_29082} {RNA1310_61099} {RNA815_29618}
7. MligTC455_01202 14 0.28 Mlig455_029374

Neo: -

Age: -

0.989 - 0.989 - - - - Mlig455_029374 {REF} {Length: 479} {NoTransDecoderORF}
8. MligTC455_06526 4 0.08 Mlig455_042766

Neo: -

Age: -

0.983 - 0.983 - - - - Mlig455_042766 {REF} {Length: 692} {NoTransDecoderORF} {RNA1310_31473} {RNA815_48140}
9. MligTC455_21632 25 0.53 Mlig455_006131, Mlig455_022249

Neo: -

Age: -

0.983 - 0.983 - - - -

Mlig455_006131 {REF} {Length: 598} {NoTransDecoderORF} {RNA1509_19711} {RNA1310_92770} {RNA815_19809}

Mlig455_022249 {REF} {Length: 1751} {RNA1310_36518} {RNA815_19809}
10. MligTC455_24287 4 0.09 Mlig455_039071, Mlig999023.g1

Neo: -

Age: -

0.983 - 0.983 - - - -

Mlig455_039071 {REF} {Length: 739} {NoTransDecoderORF} {RNA1310_31473} {RNA815_48140}

11. MligTC455_26246 17 0.35 Mlig455_013416, Mlig455_047122, Mlig455_047123, Mlig455_055769

Neo: -

Age: Up-Down-Down

0.982 - 0.982 - - - -

Mlig455_013416 {REF} {Length: 4350} {Pfam: Integrase core domain [PF00665.28, score=42.4]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=52.0, Expect=2e-07]} {RNA1509_31888} {RNA1310_1190} {RNA815_22519}

Mlig455_047122 {REF} {Length: 383} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=25.6]; Zinc knuckle [PF00098.25, score=21.5]} {RNA1509_31888} {RNA1310_12942} {RNA815_47299}

Mlig455_047123 {REF} {Length: 367} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=116.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=85.7]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=98.2, Expect=4e-27]} {RNA1509_42532} {RNA1310_1190} {RNA815_22519}

Mlig455_055769 {REF} {Length: 1510} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=25.6]; Zinc knuckle [PF00098.25, score=21.5]} {RNA1509_31888} {RNA1310_12942} {RNA815_11366.1}
12. MligTC455_03798 7 0.15 Mlig455_010797

Neo: -

Age: -

0.969 - 0.969 - - - - Mlig455_010797 {REF} {Length: 1274} {RNA1310_143257}
13. MligTC455_52361 11 0.23 Mlig455_064630

Neo: Irradiation

Age: -

0.967 - 0.967 - - - - Mlig455_064630 {REF} {Length: 514} {RNA1509_55672} {RNA1310_85620} {RNA815_48393}
14. MligTC455_03918 6 0.13 Mlig455_038110

Neo: -

Age: -

0.962 - 0.962 - - - - Mlig455_038110 {REF} {Length: 754} {NoTransDecoderORF} {RNA1310_72265}
15. MligTC455_46175 11 0.23 Mlig455_025136

Neo: -

Age: -

0.958 - 0.958 - - - - Mlig455_025136 {REF} {Length: 1250} {RNA1310_18621.1} {RNA815_15980.1}
16. MligTC455_34016 46 0.96 Mlig455_006455

Neo: -

Age: logFC(26M/2M)=0.497

MX2 0.954 - 0.954 - - - - Mlig455_006455 {REF} {Length: 3014} {Pfam: Dynamin family [PF00350.25, score=111.5]; Dynamin central region [PF01031.22, score=36.1]; 50S ribosome-binding GTPase [PF01926.25, score=24.0]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=150, Expect=6e-38]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=145, Expect=1e-36]; ENSMUSG00000000386, Mx1, MX dynamin-like GTPase 1, [Score=141, Expect=1e-37]} {Dmel: FBgn0003392, shi, shibire, [Score=110, Expect=6e-25]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=102, Expect=1e-22]} {Smed: dd_Smed_v6_2583_0_1, dd_Smed_v6_2583_0_1, [Score=107, Expect=3e-24]} {RNA1310_33314} {RNA815_28377}
17. MligTC455_00765 3 0.07 Mlig455_015178

Neo: -

Age: -

0.952 - 0.952 - - - - Mlig455_015178 {REF} {Length: 768} {RNA1509_1205} {RNA1310_107414}
18. MligTC455_05813 2 0.04 Mlig455_030577

Neo: -

Age: -

0.95 - 0.950 - - - - Mlig455_030577 {REF} {Length: 316} {NoTransDecoderORF} {RNA1509_10345} {RNA1310_7175.2} {RNA815_2240}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA