TomoSeq data search

Data search

Results for MligTC455_32662

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32662	251	5.23	Mlig455_021429	Neo: - Age: -	FGD3	Mlig455_021429 {REF} {Length: 2527} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=140.0]; PH domain [PF00169.31, score=33.5]} {Human: ENSG00000127084, FGD3, FYVE, RhoGEF and PH domain containing 3, [RH, Score=127, Expect=1e-30]; ENSG00000180263, FGD6, FYVE, RhoGEF and PH domain containing 6, [RH, Score=124, Expect=2e-29]} {Mouse: ENSMUSG00000037946, Fgd3, FYVE, RhoGEF and PH domain containing 3, [RH, Score=125, Expect=2e-30]} {Dmel: FBgn0035761, RhoGEF4, Rho guanine nucleotide exchange factor 4, [RH, Score=198, Expect=1e-55]} {Celegans: WBGene00006431, tag-52, Putative protein tag-52, [RH, Score=105, Expect=1e-23]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=95.9, Expect=2e-20]} {RNA1509_43721} {RNA1310_18929, RNA1509_43721} {RNA1509_43721, RNA815_8437.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32662

251

5.23

Mlig455_021429

Neo: -

Age: -

FGD3

Mlig455_021429 {REF} {Length: 2527} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=140.0]; PH domain [PF00169.31, score=33.5]} {Human: ENSG00000127084, FGD3, FYVE, RhoGEF and PH domain containing 3, [RH, Score=127, Expect=1e-30]; ENSG00000180263, FGD6, FYVE, RhoGEF and PH domain containing 6, [RH, Score=124, Expect=2e-29]} {Mouse: ENSMUSG00000037946, Fgd3, FYVE, RhoGEF and PH domain containing 3, [RH, Score=125, Expect=2e-30]} {Dmel: FBgn0035761, RhoGEF4, Rho guanine nucleotide exchange factor 4, [RH, Score=198, Expect=1e-55]} {Celegans: WBGene00006431, tag-52, Putative protein tag-52, [RH, Score=105, Expect=1e-23]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=95.9, Expect=2e-20]} {RNA1509_43721} {RNA1310_18929, RNA1509_43721} {RNA1509_43721, RNA815_8437.1}

Cumulative graph for MligTC455_32662

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.075	2.763	0.41126	1.00000
RegionR2	-0.137	2.763	0.84953	1.00000
RegionR3	-0.549	2.763	0.33295	0.87092
RegionR4	-0.748	2.763	0.27292	0.57922
RegionR5	-0.076	2.763	0.86920	1.00000
RegionR6	-0.09	2.763	0.87381	1.00000
RegionR7	0.315	2.763	0.64693	1.00000
RegionR8	0.208	2.763	0.80655	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.067	2.763	0.20544	0.94513
RegenerationR2	0.602	2.763	0.33501	0.77086
RegenerationR3	0.727	2.763	0.29715	0.72874
RegenerationR4	0.387	2.763	0.57528	0.90383
RegenerationR5	-0.06	2.763	0.92847	1.00000
RegenerationR6	0.719	2.763	0.27520	0.62461
RegenerationBL	1.013	2.763	0.16933	0.49358
RegenerationTP	-2.813	2.763	0.02631	0.27313

Genes with expression patterns similar to MligTC455_32662

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32662	251	5.23	Mlig455_021429	Neo: - Age: -	FGD3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021429 {REF} {Length: 2527} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=140.0]; PH domain [PF00169.31, score=33.5]} {Human: ENSG00000127084, FGD3, FYVE, RhoGEF and PH domain containing 3, [RH, Score=127, Expect=1e-30]; ENSG00000180263, FGD6, FYVE, RhoGEF and PH domain containing 6, [RH, Score=124, Expect=2e-29]} {Mouse: ENSMUSG00000037946, Fgd3, FYVE, RhoGEF and PH domain containing 3, [RH, Score=125, Expect=2e-30]} {Dmel: FBgn0035761, RhoGEF4, Rho guanine nucleotide exchange factor 4, [RH, Score=198, Expect=1e-55]} {Celegans: WBGene00006431, tag-52, Putative protein tag-52, [RH, Score=105, Expect=1e-23]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=95.9, Expect=2e-20]} {RNA1509_43721} {RNA1310_18929, RNA1509_43721} {RNA1509_43721, RNA815_8437.1}
2.	MligTC455_45481	213	4.44	Mlig455_041828	Neo: - Age: - Region-enriched R5: 2.099/0.00443	WDR4	1.709	-	-	-	-	0.742	0.967	Mlig455_041828 {REF} {Length: 2436} {TRANSSPLICED} {Human: ENSG00000160193, WDR4, WD repeat domain 4, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000024037, Wdr4, WD repeat domain 4, [RH, Score=73.6, Expect=1e-13]} {Smed: dd_Smed_v6_11186_0_1, dd_Smed_v6_11186_0_1, [Score=80.9, Expect=1e-16]} {RNA1310_24007} {RNA815_9753}
3.	MligTC455_49633	243	5.07	Mlig455_061915	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_061915 {REF} {Length: 1066} {RNA1509_13767} {RNA1310_26213} {RNA815_5574.1}
4.	MligTC455_32924	623	12.99	Mlig455_067107	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.788 Region-enriched R5: 1.375/0.00015	H1FOO	0.956	-	-	-	-	-	0.956	Mlig455_067107 {REF} {Length: 1068} {Pfam: linker histone H1 and H5 family [PF00538.21, score=93.3]} {Human: ENSG00000178804, H1FOO, H1 histone family member O oocyte specific, [RH, Score=70.5, Expect=1e-13]} {Mouse: ENSMUSG00000042279, H1foo, H1 histone family, member O, oocyte-specific, [Score=62.8, Expect=2e-11]} {Dmel: FBgn0051617, His1:CG31617, [RH, Score=91.3, Expect=7e-22]} {Celegans: WBGene00001853, hil-2, Histone H1.2, [Score=66.6, Expect=2e-13]} {Smed: dd_Smed_v6_601_0_1, dd_Smed_v6_601_0_1, [RH, Score=116, Expect=5e-32]} {RNA1509_28942, RNA1509_35744, RNA1509_40195} {RNA1310_35964, RNA1509_28942, RNA1509_35744, RNA1509_40195} {RNA1509_28942, RNA1509_35744, RNA1509_40195, RNA815_16249}