Data search


search
Exact
Search

Results for MligTC455_32705

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32705 12 0.26 Mlig455_042025

Neo: -

Age: Up-Down-Up

HTATIP2 Mlig455_042025 {REF} {Length: 1480} {TRANSSPLICED} {Pfam: NAD(P)H-binding [PF13460.8, score=36.0]; Semialdehyde dehydrogenase, NAD binding domain [PF01118.26, score=23.1]} {Human: ENSG00000109854, HTATIP2, HIV-1 Tat interactive protein 2, [RH, Score=175, Expect=4e-54]} {Mouse: ENSMUSG00000039745, Htatip2, HIV-1 Tat interactive protein 2, [RH, Score=178, Expect=2e-55]} {Celegans: WBGene00050941, C33F10.14, [RH, Score=179, Expect=2e-56]} {Smed: dd_Smed_v6_342_0_1, dd_Smed_v6_342_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_27414} {RNA1310_24342.1} {RNA815_17118}

Cumulative graph for MligTC455_32705

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.511 0.623 0.99996 1.00000
RegionR2 1.424 0.623 0.99990 1.00000
RegionR3 -0.428 0.623 0.99998 1.00000
RegionR4 -0.44 0.623 0.99987 1.00000
RegionR5 -1.152 0.623 0.99989 1.00000
RegionR6 -0.496 0.623 0.99993 1.00000
RegionR7 -0.17 0.623 0.99996 1.00000
RegionR8 -0.249 0.623 0.99996 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.857 0.623 0.99995 1.00000
RegenerationR2 3.699 0.623 0.01257 0.18265
RegenerationR3 5.837 0.623 0.99949 1.00000
RegenerationR4 5.169 0.623 0.99980 1.00000
RegenerationR5 5.665 0.623 0.99952 1.00000
RegenerationR6 3.616 0.623 0.99989 1.00000
RegenerationBL 4.003 0.623 0.99993 1.00000
RegenerationTP 4.716 0.623 0.99987 1.00000


Genes with expression patterns similar to MligTC455_32705

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32705 12 0.26 Mlig455_042025

Neo: -

Age: Up-Down-Up

HTATIP2 1 - - - - - 1.000 Mlig455_042025 {REF} {Length: 1480} {TRANSSPLICED} {Pfam: NAD(P)H-binding [PF13460.8, score=36.0]; Semialdehyde dehydrogenase, NAD binding domain [PF01118.26, score=23.1]} {Human: ENSG00000109854, HTATIP2, HIV-1 Tat interactive protein 2, [RH, Score=175, Expect=4e-54]} {Mouse: ENSMUSG00000039745, Htatip2, HIV-1 Tat interactive protein 2, [RH, Score=178, Expect=2e-55]} {Celegans: WBGene00050941, C33F10.14, [RH, Score=179, Expect=2e-56]} {Smed: dd_Smed_v6_342_0_1, dd_Smed_v6_342_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_27414} {RNA1310_24342.1} {RNA815_17118}
2. MligTC455_32087 356 7.41 Mlig455_006815, Mlig455_055191

Neo: -

Age: -

0.958 - - - - - 0.958

Mlig455_006815 {REF} {Length: 2436} {RNA1509_42275} {RNA1310_5257.1, RNA1509_42275} {RNA1509_42275, RNA815_4711}

Mlig455_055191 {REF} {Length: 2731} {Pfam: Ribosomal protein L11, N-terminal domain [PF03946.16, score=18.8]} {RNA1509_56522, RNA1509_56687} {RNA1310_5257.1, RNA1509_56522, RNA1509_56687} {RNA1509_56522, RNA1509_56687, RNA815_4711}
3. MligTC455_22920 196 4.08 Mlig455_039387

Neo: -

Age: -

TRPC4 0.957 - - - - - 0.957 Mlig455_039387 {REF} {Length: 2289} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=63.5, Expect=6e-11]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=98.6, Expect=6e-23]} {Smed: dd_Smed_v6_20495_0_1, dd_Smed_v6_20495_0_1, [Score=155, Expect=1e-42]} {RNA1509_26602} {RNA1310_3579} {RNA815_924}
4. MligTC455_14885 88 1.83 Mlig455_007815

Neo: -

Age: Up-Down-Up

0.955 - - - - - 0.955 Mlig455_007815 {REF} {Length: 1017} {TRANSSPLICED} {RNA1310_30392} {RNA815_41881}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA