TomoSeq data search

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Results for MligTC455_32710

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32710

7276

151.58

Mlig455_025749, Mlig455_025779

Neo: -

Age: logFC(26M/2M)=-0.297

Region-enriched R6: 1.023/0.02983

CLTA

Mlig455_025749 {REF} {Length: 2824} {Pfam: Clathrin light chain [PF01086.19, score=146.6]} {Human: ENSG00000122705, CLTA, clathrin light chain A, [RH, Score=142, Expect=3e-42]; ENSG00000175416, CLTB, clathrin light chain B, [RH, Score=141, Expect=6e-42]} {Mouse: ENSMUSG00000047547, Cltb, clathrin, light polypeptide (Lcb), [RH, Score=142, Expect=2e-42]; ENSMUSG00000028478, Clta, clathrin, light polypeptide (Lca), [RH, Score=142, Expect=2e-42]} {Dmel: FBgn0024814, Clc, Clathrin light chain, [RH, Score=94.7, Expect=5e-24]} {Celegans: WBGene00020246, clic-1, Clathrin light chain, [RH, Score=48.1, Expect=7e-07]} {Smed: dd_Smed_v6_1361_0_1, dd_Smed_v6_1361_0_1, [RH, Score=119, Expect=7e-34]} {RNA1509_12838, RNA1509_14922, RNA1509_23388, RNA1509_27651, RNA1509_520} {RNA1310_22177.1, RNA1509_12838, RNA1509_14922, RNA1509_23388, RNA1509_27651, RNA1509_520} {RNA1509_12838, RNA1509_14922, RNA1509_23388, RNA1509_27651, RNA1509_520, RNA815_11710.1}

Mlig455_025779 {REF} {Length: 1307} {Pfam: Clathrin light chain [PF01086.19, score=146.6]} {Human: ENSG00000122705, CLTA, clathrin light chain A, [RH, Score=142, Expect=3e-42]; ENSG00000175416, CLTB, clathrin light chain B, [RH, Score=141, Expect=6e-42]} {Mouse: ENSMUSG00000047547, Cltb, clathrin, light polypeptide (Lcb), [RH, Score=142, Expect=2e-42]; ENSMUSG00000028478, Clta, clathrin, light polypeptide (Lca), [RH, Score=142, Expect=2e-42]} {Dmel: FBgn0024814, Clc, Clathrin light chain, [RH, Score=94.7, Expect=5e-24]} {Celegans: WBGene00020246, clic-1, Clathrin light chain, [RH, Score=48.1, Expect=7e-07]} {Smed: dd_Smed_v6_1361_0_1, dd_Smed_v6_1361_0_1, [RH, Score=119, Expect=7e-34]} {RNA1509_520} {RNA1310_22177.1} {RNA815_11710.1}

Cumulative graph for MligTC455_32710

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.675	7.337	0.00000	0.00319
RegionR2	0.563	7.337	0.12380	0.43592
RegionR3	0.553	7.337	0.07293	0.47896
RegionR4	-0.196	7.337	0.57585	0.89304
RegionR5	0.73	7.337	0.01175	0.06486
RegionR6	1.023	7.337	0.00067	0.02983
RegionR7	0.183	7.337	0.56351	1.00000
RegionR8	-0.18	7.337	0.61441	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.531	7.337	0.48713	1.00000
RegenerationR2	-0.521	7.337	0.18277	0.62564
RegenerationR3	0.115	7.337	0.77415	0.97295
RegenerationR4	0.202	7.337	0.62376	0.92188
RegenerationR5	-0.283	7.337	0.46905	0.84145
RegenerationR6	-0.513	7.337	0.19898	0.53936
RegenerationBL	0.297	7.337	0.39778	0.76645
RegenerationTP	0.394	7.337	0.29554	0.74090

Genes with expression patterns similar to MligTC455_32710

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32710	7276	151.58	Mlig455_025749, Mlig455_025779	Neo: - Age: logFC(26M/2M)=-0.297 Region-enriched R6: 1.023/0.02983	CLTA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025749 {REF} {Length: 2824} {Pfam: Clathrin light chain [PF01086.19, score=146.6]} {Human: ENSG00000122705, CLTA, clathrin light chain A, [RH, Score=142, Expect=3e-42]; ENSG00000175416, CLTB, clathrin light chain B, [RH, Score=141, Expect=6e-42]} {Mouse: ENSMUSG00000047547, Cltb, clathrin, light polypeptide (Lcb), [RH, Score=142, Expect=2e-42]; ENSMUSG00000028478, Clta, clathrin, light polypeptide (Lca), [RH, Score=142, Expect=2e-42]} {Dmel: FBgn0024814, Clc, Clathrin light chain, [RH, Score=94.7, Expect=5e-24]} {Celegans: WBGene00020246, clic-1, Clathrin light chain, [RH, Score=48.1, Expect=7e-07]} {Smed: dd_Smed_v6_1361_0_1, dd_Smed_v6_1361_0_1, [RH, Score=119, Expect=7e-34]} {RNA1509_12838, RNA1509_14922, RNA1509_23388, RNA1509_27651, RNA1509_520} {RNA1310_22177.1, RNA1509_12838, RNA1509_14922, RNA1509_23388, RNA1509_27651, RNA1509_520} {RNA1509_12838, RNA1509_14922, RNA1509_23388, RNA1509_27651, RNA1509_520, RNA815_11710.1} Mlig455_025779 {REF} {Length: 1307} {Pfam: Clathrin light chain [PF01086.19, score=146.6]} {Human: ENSG00000122705, CLTA, clathrin light chain A, [RH, Score=142, Expect=3e-42]; ENSG00000175416, CLTB, clathrin light chain B, [RH, Score=141, Expect=6e-42]} {Mouse: ENSMUSG00000047547, Cltb, clathrin, light polypeptide (Lcb), [RH, Score=142, Expect=2e-42]; ENSMUSG00000028478, Clta, clathrin, light polypeptide (Lca), [RH, Score=142, Expect=2e-42]} {Dmel: FBgn0024814, Clc, Clathrin light chain, [RH, Score=94.7, Expect=5e-24]} {Celegans: WBGene00020246, clic-1, Clathrin light chain, [RH, Score=48.1, Expect=7e-07]} {Smed: dd_Smed_v6_1361_0_1, dd_Smed_v6_1361_0_1, [RH, Score=119, Expect=7e-34]} {RNA1509_520} {RNA1310_22177.1} {RNA815_11710.1}
2.	MligTC455_34496	1794	37.37	Mlig455_067513	Neo: - Age: - Region-enriched R6: 1.472/0.00009 Region-enriched R5: 1.165/0.00036	HSBP1	2.496	0.700	-	0.846	-	0.950	-	Mlig455_067513 {REF} {Length: 1035} {Pfam: Heat shock factor binding protein 1 [PF06825.14, score=85.1]; C-terminal leucine zipper domain of cyclic nucleotide-gated channels [PF16526.7, score=25.4]; Uncharacterized conserved protein [PF10241.11, score=19.4]} {Human: ENSG00000230989, HSBP1, heat shock factor binding protein 1, [RH, Score=81.6, Expect=8e-22]} {Mouse: ENSMUSG00000031839, Hsbp1, heat shock factor binding protein 1, [RH, Score=75.9, Expect=1e-19]} {Dmel: FBgn0032429, CG5446, [RH, Score=78.6, Expect=9e-21]} {Celegans: WBGene00002002, hsb-1, Heat Shock factor Binding protein, [RH, Score=58.5, Expect=5e-13]} {Smed: dd_Smed_v6_15016_0_1, dd_Smed_v6_15016_0_1, [Score=78.6, Expect=4e-21]} {RNA1509_10103, RNA1509_13157, RNA1509_28869, RNA1509_29253, RNA1509_44960, RNA1509_58452} {RNA1310_37804, RNA1509_10103, RNA1509_13157, RNA1509_28869, RNA1509_29253, RNA1509_44960, RNA1509_58452} {RNA1509_10103, RNA1509_13157, RNA1509_28869, RNA1509_29253, RNA1509_44960, RNA1509_58452, RNA815_17924.1}
3.	MligTC455_26168	821	17.11	Mlig455_019363	Neo: - Age: logFC(26M/2M)=0.387 Region-enriched R5: 1.107/0.01127		1.757	-	-	0.802	-	-	0.955	Mlig455_019363 {REF} {Length: 4266} {TRANSSPLICED} {Pfam: Prokaryotic RING finger family 4 [PF14447.8, score=20.2]} {RNA1509_42908, RNA1509_8681} {RNA1310_8559, RNA1509_42908, RNA1509_8681} {RNA1509_42908, RNA1509_8681, RNA815_6586}
4.	MligTC455_44203	530	11.04	Mlig455_025315	Neo: Int S/G2/M Age: Down-Up-Down	BCKDHA	1.653	-	-	-	-	0.703	0.950	Mlig455_025315 {REF} {Length: 2202} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=304.4]; 1-deoxy-D-xylulose-5-phosphate synthase [PF13292.8, score=22.4]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=21.2]} {Human: ENSG00000248098, BCKDHA, branched chain keto acid dehydrogenase E1, alpha polypeptide, [RH, Score=500, Expect=6e-176]; ENSG00000255730, AC011462.1, novel protein, [RH, Score=498, Expect=2e-174]} {Mouse: ENSMUSG00000060376, Bckdha, branched chain ketoacid dehydrogenase E1, alpha polypeptide, [RH, Score=502, Expect=7e-177]} {Dmel: FBgn0037709, CG8199, [RH, Score=458, Expect=1e-159]} {Celegans: WBGene00012713, bckd-1A, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, [RH, Score=481, Expect=8e-169]} {Smed: dd_Smed_v6_3288_0_1, dd_Smed_v6_3288_0_1, [RH, Score=488, Expect=7e-172]} {RNA1509_21323} {RNA1310_8924.1} {RNA815_7812}
5.	MligTC455_41971	516	10.74	Mlig455_017945	Neo: - Age: logFC(26M/2M)=0.472		0.966	-	-	-	-	-	0.966	Mlig455_017945 {REF} {Length: 3869} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=43.5]} {RNA1509_13660} {RNA1310_2845.1} {RNA815_872.1}
6.	MligTC455_19721	2162	45.04	Mlig455_029202	Neo: - Age: -	REEP5	0.964	-	-	-	-	-	0.964	Mlig455_029202 {REF} {Length: 1274} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=95.2]} {Human: ENSG00000129625, REEP5, receptor accessory protein 5, [RH, Score=182, Expect=2e-58]} {Mouse: ENSMUSG00000005873, Reep5, receptor accessory protein 5, [Score=178, Expect=4e-57]} {Dmel: FBgn0033906, CG8331, [RH, Score=152, Expect=5e-47]} {Celegans: WBGene00022127, yop-1, Receptor expression-enhancing protein, [RH, Score=149, Expect=5e-46]} {Smed: dd_Smed_v6_838_0_1, dd_Smed_v6_838_0_1, [Score=209, Expect=2e-69]} {RNA1509_13751, RNA1509_47067} {RNA1310_18132, RNA1509_47067} {RNA1509_47067, RNA815_6742.1}
7.	MligTC455_47515	234	4.87	Mlig455_066365	Neo: - Age: -	ALKBH2	0.964	-	-	-	-	-	0.964	Mlig455_066365 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=101.9]} {Human: ENSG00000189046, ALKBH2, alkB homolog 2, alpha-ketoglutarate dependent dioxygenase, [RH, Score=184, Expect=5e-57]} {Mouse: ENSMUSG00000044339, Alkbh2, alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase, [RH, Score=190, Expect=6e-60]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=73.2, Expect=5e-15]} {RNA1509_22249, RNA1509_35399, RNA1509_46902} {RNA1310_36374, RNA1509_22249, RNA1509_35399, RNA1509_46902} {RNA1509_22249, RNA1509_35399, RNA1509_46902, RNA815_17303}
8.	MligTC455_40127	1207	25.14	Mlig455_017076	Neo: - Age: - Region-enriched R4: 1.077/0.01220	GRAMD1B	0.962	-	-	-	-	-	0.962	Mlig455_017076 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: VAD1 Analog of StAR-related lipid transfer domain [PF16016.7, score=85.8]} {Human: ENSG00000023171, GRAMD1B, GRAM domain containing 1B, [RH, Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000040111, Gramd1b, GRAM domain containing 1B, [RH, Score=80.9, Expect=7e-16]} {Dmel: FBgn0085423, CG34394, [RH, Score=69.3, Expect=3e-12]} {Smed: dd_Smed_v6_9149_0_1, dd_Smed_v6_9149_0_1, [Score=73.9, Expect=6e-14]} {RNA1509_11472} {RNA1310_17969, RNA1509_11472} {RNA1509_11472, RNA815_18157}
9.	MligTC455_53066	10246	213.46	Mlig455_020061, Mlig455_040860, Mlig455_066485	Neo: Int S/G2/M Age: Down-Up-Down	PFDN5	0.955	-	-	-	-	0.955	-	Mlig455_020061 {REF} {Length: 1181} {Pfam: Prefoldin subunit [PF02996.19, score=76.8]} {Human: ENSG00000123349, PFDN5, prefoldin subunit 5, [RH, Score=139, Expect=3e-42]} {Mouse: ENSMUSG00000001289, Pfdn5, prefoldin 5, [RH, Score=138, Expect=3e-42]} {Dmel: FBgn0038976, Pfdn5, Prefoldin 5, [RH, Score=85.9, Expect=1e-21]} {Smed: dd_Smed_v6_3249_0_1, dd_Smed_v6_3249_0_1, [RH, Score=119, Expect=4e-35]} {RNA1509_35271, RNA1509_42305, RNA1509_46966, RNA1509_9499} {RNA1310_30210, RNA1509_35271, RNA1509_46966, RNA1509_9499} {RNA1509_35271, RNA1509_46966, RNA1509_9499, RNA815_9822} Mlig455_040860 {REF} {Length: 1178} {Pfam: Prefoldin subunit [PF02996.19, score=78.6]} {Human: ENSG00000123349, PFDN5, prefoldin subunit 5, [RH, Score=139, Expect=1e-42]} {Mouse: ENSMUSG00000001289, Pfdn5, prefoldin 5, [RH, Score=139, Expect=1e-42]} {Dmel: FBgn0038976, Pfdn5, Prefoldin 5, [RH, Score=86.3, Expect=1e-21]} {Smed: dd_Smed_v6_3249_0_1, dd_Smed_v6_3249_0_1, [RH, Score=119, Expect=5e-35]} {RNA1509_42305} {RNA1310_30210} {RNA815_9822} Mlig455_066485 {REF} {Length: 2609} {Pfam: Prefoldin subunit [PF02996.19, score=78.7]} {Human: ENSG00000123349, PFDN5, prefoldin subunit 5, [RH, Score=139, Expect=3e-42]} {Mouse: ENSMUSG00000001289, Pfdn5, prefoldin 5, [RH, Score=138, Expect=3e-42]} {Dmel: FBgn0038976, Pfdn5, Prefoldin 5, [RH, Score=84.0, Expect=7e-21]} {Smed: dd_Smed_v6_3249_0_1, dd_Smed_v6_3249_0_1, [RH, Score=118, Expect=2e-34]} {RNA1509_26446, RNA1509_42305} {RNA1310_30210, RNA1509_26446, RNA1509_42305} {RNA1509_26446, RNA1509_42305, RNA815_9822}
10.	MligTC455_36142	371	7.73	Mlig455_066875	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.549 Region-enriched R2: 3.692/0.01748		0.954	-	-	-	-	-	0.954	Mlig455_066875 {REF} {Length: 917} {NoTransDecoderORF} {RNA1509_54523} {RNA1310_17531} {RNA815_38390}
11.	MligTC455_48361	535	11.14	Mlig455_017451, Mlig455_030948	Neo: - Age: - Region-enriched R3: 2.862/0.00014 Region-enriched R5: 2.616/0.00013 Region-enriched R4: 2.612/0.00066 Region-enriched R6: 2.242/0.03281		0.951	-	-	-	-	-	0.951	Mlig455_017451 {REF} {Length: 4246} {Pfam: Death domain [PF00531.24, score=28.9]} {Celegans: WBGene00002041, hum-8, Heavy chain, Unconventional Myosin, [Score=50.1, Expect=8e-06]} {Smed: dd_Smed_v6_13807_0_1, dd_Smed_v6_13807_0_1, [Score=107, Expect=1e-23]} {RNA1509_29690} {RNA1310_5206.1} {RNA815_3494} Mlig455_030948 {REF} {Length: 4219} {Pfam: Death domain [PF00531.24, score=29.8]} {Celegans: WBGene00002041, hum-8, Heavy chain, Unconventional Myosin, [Score=50.1, Expect=8e-06]} {Smed: dd_Smed_v6_13807_0_1, dd_Smed_v6_13807_0_1, [Score=107, Expect=1e-23]} {RNA1509_29690} {RNA1310_5206.1} {RNA815_3494}
12.	MligTC455_44798	694	14.45	Mlig455_000092	Neo: - Age: Up-Down-Up	MEST	0.95	-	-	-	-	-	0.950	Mlig455_000092 {REF} {Length: 1877} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase family [PF12697.9, score=49.1]; alpha/beta hydrolase fold [PF00561.22, score=44.4]; Serine aminopeptidase, S33 [PF12146.10, score=32.5]} {Human: ENSG00000106484, MEST, mesoderm specific transcript, [RH, Score=112, Expect=8e-28]} {Mouse: ENSMUSG00000051855, Mest, mesoderm specific transcript, [RH, Score=113, Expect=5e-28]} {RNA1509_12415, RNA1509_51421} {RNA1310_16921, RNA1509_12415} {RNA1509_12415, RNA815_7250.1}

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