TomoSeq data search

Data search

Results for MligTC455_32780

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32780	7010	146.04	Mlig455_028664, Mlig455_028695	Neo: - Age: -	SAR1B	Mlig455_028664 {REF} {Length: 1576} {Pfam: ADP-ribosylation factor family [PF00025.23, score=69.0]} {Human: ENSG00000152700, SAR1B, secretion associated Ras related GTPase 1B, [Score=120, Expect=4e-34]; ENSG00000079332, SAR1A, secretion associated Ras related GTPase 1A, [Score=118, Expect=2e-33]} {Mouse: ENSMUSG00000020386, Sar1b, secretion associated Ras related GTPase 1B, [Score=120, Expect=2e-34]; ENSMUSG00000020088, Sar1a, secretion associated Ras related GTPase 1A, [Score=118, Expect=2e-33]} {Dmel: FBgn0038947, Sar1, Secretion-associated Ras-related 1, [Score=123, Expect=1e-35]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=125, Expect=1e-36]} {Smed: dd_Smed_v6_589_0_1, dd_Smed_v6_589_0_1, [Score=117, Expect=1e-33]} {RNA1509_35347, RNA1509_9083} {RNA1310_1428.1, RNA1509_35347} {RNA1509_35347, RNA815_5730} Mlig455_028695 {REF} {Length: 2121} {Pfam: ADP-ribosylation factor family [PF00025.23, score=71.2]} {Human: ENSG00000152700, SAR1B, secretion associated Ras related GTPase 1B, [Score=124, Expect=7e-35]; ENSG00000079332, SAR1A, secretion associated Ras related GTPase 1A, [Score=122, Expect=4e-34]} {Mouse: ENSMUSG00000020386, Sar1b, secretion associated Ras related GTPase 1B, [Score=124, Expect=3e-35]; ENSMUSG00000020088, Sar1a, secretion associated Ras related GTPase 1A, [Score=122, Expect=3e-34]} {Dmel: FBgn0038947, Sar1, Secretion-associated Ras-related 1, [Score=123, Expect=6e-35]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=127, Expect=1e-36]} {Smed: dd_Smed_v6_589_0_1, dd_Smed_v6_589_0_1, [Score=122, Expect=1e-34]} {RNA1509_13665, RNA1509_22577, RNA1509_31677, RNA1509_9083} {RNA1310_1428.1, RNA1509_13665, RNA1509_22577, RNA1509_31677} {RNA1509_13665, RNA1509_22577, RNA1509_31677, RNA815_5730}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32780

7010

146.04

Mlig455_028664, Mlig455_028695

Neo: -

Age: -

SAR1B

Mlig455_028664 {REF} {Length: 1576} {Pfam: ADP-ribosylation factor family [PF00025.23, score=69.0]} {Human: ENSG00000152700, SAR1B, secretion associated Ras related GTPase 1B, [Score=120, Expect=4e-34]; ENSG00000079332, SAR1A, secretion associated Ras related GTPase 1A, [Score=118, Expect=2e-33]} {Mouse: ENSMUSG00000020386, Sar1b, secretion associated Ras related GTPase 1B, [Score=120, Expect=2e-34]; ENSMUSG00000020088, Sar1a, secretion associated Ras related GTPase 1A, [Score=118, Expect=2e-33]} {Dmel: FBgn0038947, Sar1, Secretion-associated Ras-related 1, [Score=123, Expect=1e-35]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=125, Expect=1e-36]} {Smed: dd_Smed_v6_589_0_1, dd_Smed_v6_589_0_1, [Score=117, Expect=1e-33]} {RNA1509_35347, RNA1509_9083} {RNA1310_1428.1, RNA1509_35347} {RNA1509_35347, RNA815_5730}

Mlig455_028695 {REF} {Length: 2121} {Pfam: ADP-ribosylation factor family [PF00025.23, score=71.2]} {Human: ENSG00000152700, SAR1B, secretion associated Ras related GTPase 1B, [Score=124, Expect=7e-35]; ENSG00000079332, SAR1A, secretion associated Ras related GTPase 1A, [Score=122, Expect=4e-34]} {Mouse: ENSMUSG00000020386, Sar1b, secretion associated Ras related GTPase 1B, [Score=124, Expect=3e-35]; ENSMUSG00000020088, Sar1a, secretion associated Ras related GTPase 1A, [Score=122, Expect=3e-34]} {Dmel: FBgn0038947, Sar1, Secretion-associated Ras-related 1, [Score=123, Expect=6e-35]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=127, Expect=1e-36]} {Smed: dd_Smed_v6_589_0_1, dd_Smed_v6_589_0_1, [Score=122, Expect=1e-34]} {RNA1509_13665, RNA1509_22577, RNA1509_31677, RNA1509_9083} {RNA1310_1428.1, RNA1509_13665, RNA1509_22577, RNA1509_31677} {RNA1509_13665, RNA1509_22577, RNA1509_31677, RNA815_5730}

Cumulative graph for MligTC455_32780

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.456	7.311	0.22685	0.87116
RegionR2	-0.607	7.311	0.01161	0.11058
RegionR3	0.233	7.311	0.23711	0.77850
RegionR4	0.401	7.311	0.08060	0.26628
RegionR5	0.317	7.311	0.09440	0.29374
RegionR6	0.226	7.311	0.25323	0.83885
RegionR7	0.108	7.311	0.60626	1.00000
RegionR8	-0.222	7.311	0.36915	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.545	7.311	0.30714	1.00000
RegenerationR2	-0.37	7.311	0.13803	0.56642
RegenerationR3	-0.875	7.311	0.00065	0.03867
RegenerationR4	-0.622	7.311	0.01775	0.20894
RegenerationR5	-0.51	7.311	0.04149	0.33455
RegenerationR6	-0.934	7.311	0.00031	0.01752
RegenerationBL	-0.847	7.311	0.00084	0.02031
RegenerationTP	-0.136	7.311	0.60243	0.96215

Genes with expression patterns similar to MligTC455_32780

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32780	7010	146.04	Mlig455_028664, Mlig455_028695	Neo: - Age: -	SAR1B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_028664 {REF} {Length: 1576} {Pfam: ADP-ribosylation factor family [PF00025.23, score=69.0]} {Human: ENSG00000152700, SAR1B, secretion associated Ras related GTPase 1B, [Score=120, Expect=4e-34]; ENSG00000079332, SAR1A, secretion associated Ras related GTPase 1A, [Score=118, Expect=2e-33]} {Mouse: ENSMUSG00000020386, Sar1b, secretion associated Ras related GTPase 1B, [Score=120, Expect=2e-34]; ENSMUSG00000020088, Sar1a, secretion associated Ras related GTPase 1A, [Score=118, Expect=2e-33]} {Dmel: FBgn0038947, Sar1, Secretion-associated Ras-related 1, [Score=123, Expect=1e-35]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=125, Expect=1e-36]} {Smed: dd_Smed_v6_589_0_1, dd_Smed_v6_589_0_1, [Score=117, Expect=1e-33]} {RNA1509_35347, RNA1509_9083} {RNA1310_1428.1, RNA1509_35347} {RNA1509_35347, RNA815_5730} Mlig455_028695 {REF} {Length: 2121} {Pfam: ADP-ribosylation factor family [PF00025.23, score=71.2]} {Human: ENSG00000152700, SAR1B, secretion associated Ras related GTPase 1B, [Score=124, Expect=7e-35]; ENSG00000079332, SAR1A, secretion associated Ras related GTPase 1A, [Score=122, Expect=4e-34]} {Mouse: ENSMUSG00000020386, Sar1b, secretion associated Ras related GTPase 1B, [Score=124, Expect=3e-35]; ENSMUSG00000020088, Sar1a, secretion associated Ras related GTPase 1A, [Score=122, Expect=3e-34]} {Dmel: FBgn0038947, Sar1, Secretion-associated Ras-related 1, [Score=123, Expect=6e-35]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=127, Expect=1e-36]} {Smed: dd_Smed_v6_589_0_1, dd_Smed_v6_589_0_1, [Score=122, Expect=1e-34]} {RNA1509_13665, RNA1509_22577, RNA1509_31677, RNA1509_9083} {RNA1310_1428.1, RNA1509_13665, RNA1509_22577, RNA1509_31677} {RNA1509_13665, RNA1509_22577, RNA1509_31677, RNA815_5730}
2.	MligTC455_32781	5703	118.82	Mlig455_028675	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.215	SAR1A	5.356	0.723	0.847	0.989	0.974	0.932	0.891	Mlig455_028675 {REF} {Length: 1916} {Pfam: ADP-ribosylation factor family [PF00025.23, score=206.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=36.6]; G-protein alpha subunit [PF00503.22, score=31.4]; Ras family [PF00071.24, score=31.2]; Signal recognition particle receptor beta subunit [PF09439.12, score=29.0]; 50S ribosome-binding GTPase [PF01926.25, score=27.9]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=18.6]} {Human: ENSG00000079332, SAR1A, secretion associated Ras related GTPase 1A, [RH, Score=277, Expect=2e-95]; ENSG00000152700, SAR1B, secretion associated Ras related GTPase 1B, [RH, Score=277, Expect=1e-95]} {Mouse: ENSMUSG00000020386, Sar1b, secretion associated Ras related GTPase 1B, [RH, Score=278, Expect=2e-96]; ENSMUSG00000020088, Sar1a, secretion associated Ras related GTPase 1A, [RH, Score=277, Expect=9e-96]} {Dmel: FBgn0038947, Sar1, Secretion-associated Ras-related 1, [RH, Score=286, Expect=2e-99]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [RH, Score=270, Expect=3e-93]} {Smed: dd_Smed_v6_589_0_1, dd_Smed_v6_589_0_1, [RH, Score=301, Expect=1e-105]} {RNA1509_17810, RNA1509_6505} {RNA1310_1428.1, RNA1509_17810} {RNA1509_17810, RNA815_5730}
3.	MligTC455_34147	14536	302.84	Mlig455_010351	Neo: Int S/G2/M Age: Down-Down-Up	RPL39	1.756	-	-	-	0.799	0.957	-	Mlig455_010351 {REF} {Length: 345} {TRANSSPLICED} {Pfam: Ribosomal L39 protein [PF00832.22, score=74.4]} {Human: ENSG00000198918, RPL39, ribosomal protein L39, [RH, Score=82.4, Expect=8e-23]} {Mouse: ENSMUSG00000079641, Rpl39, ribosomal protein L39, [RH, Score=82.4, Expect=5e-23]; ENSMUSG00000039209, Rpl39l, ribosomal protein L39-like, [RH, Score=78.6, Expect=1e-21]} {Dmel: FBgn0023170, RpL39, Ribosomal protein L39, [RH, Score=72.4, Expect=3e-19]} {Celegans: WBGene00004453, rpl-39, 60S ribosomal protein L39, [RH, Score=73.6, Expect=8e-20]} {Smed: dd_Smed_v6_67236_0_1, dd_Smed_v6_67236_0_1, [RH, Score=75.5, Expect=1e-20]} {RNA1509_39602} {RNA1310_92891, RNA1509_39602} {RNA1509_39602, RNA815_52027}
4.	MligTC455_01613	898	18.7	Mlig455_002701, Mlig455_008562	Neo: Irradiation Age: logFC(26M/2M)=0.456 Region-enriched R5: 1.392/0.00008 Region-enriched R6: 1.139/0.03110	ZFYVE21	0.95	-	-	0.950	-	-	-	Mlig455_002701 {REF} {Length: 259} {NoTransDecoderORF} Mlig455_008562 {REF} {Length: 1585} {TRANSSPLICED} {Pfam: Zinc finger FYVE domain-containing protein 21 C-terminus [PF16696.7, score=56.0]; FYVE zinc finger [PF01363.23, score=44.7]} {Human: ENSG00000100711, ZFYVE21, zinc finger FYVE-type containing 21, [RH, Score=131, Expect=5e-37]} {Mouse: ENSMUSG00000021286, Zfyve21, zinc finger, FYVE domain containing 21, [RH, Score=135, Expect=7e-39]} {Dmel: FBgn0031450, Hrs, Hepatocyte growth factor regulated tyrosine kinase substrate, [Score=58.5, Expect=1e-09]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=58.9, Expect=7e-10]} {Smed: dd_Smed_v6_3398_0_1, dd_Smed_v6_3398_0_1, [Score=58.2, Expect=1e-09]} {RNA1509_20281, RNA1509_60161} {RNA1310_20877, RNA1509_20281, RNA1509_60161} {RNA1509_20281, RNA1509_60161, RNA815_12043.1}