Data search


search
Exact
Search

Results for MligTC455_32892

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32892 25744 536.34 Mlig455_020691, Mlig455_020758

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.221

RPL19

Mlig455_020691 {REF} {Length: 1178} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.2]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=265, Expect=3e-91]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=249, Expect=2e-85]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=273, Expect=9e-95]} {RNA1509_5123} {RNA1310_33718} {RNA815_1809.2}

Mlig455_020758 {REF} {Length: 974} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.2]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=265, Expect=3e-91]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=249, Expect=2e-85]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=273, Expect=9e-95]} {RNA1509_34522, RNA1509_46007, RNA1509_5123, RNA1509_55374} {RNA1310_33718, RNA1509_34522, RNA1509_46007, RNA1509_5123, RNA1509_55374} {RNA1509_34522, RNA1509_46007, RNA1509_5123, RNA1509_55374, RNA815_1809.2}

Cumulative graph for MligTC455_32892

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.245 9.148 0.00193 0.14091
RegionR2 -0.646 9.148 0.05688 0.28649
RegionR3 0.293 9.148 0.30177 0.84350
RegionR4 0.772 9.148 0.01241 0.07171
RegionR5 0.787 9.148 0.00331 0.02539
RegionR6 0.298 9.148 0.29215 0.88371
RegionR7 0.161 9.148 0.56256 1.00000
RegionR8 -0.421 9.148 0.20385 0.80321

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.237 9.148 0.62010 1.00000
RegenerationR2 -0.207 9.148 0.57319 0.90363
RegenerationR3 -0.268 9.148 0.46980 0.84383
RegenerationR4 -0.212 9.148 0.57909 0.90518
RegenerationR5 -0.515 9.148 0.16286 0.58750
RegenerationR6 -0.118 9.148 0.74999 0.95230
RegenerationBL 0.127 9.148 0.68282 1.00000
RegenerationTP -0.044 9.148 0.89668 1.00000


Genes with expression patterns similar to MligTC455_32892

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32892 25744 536.34 Mlig455_020691, Mlig455_020758

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.221

RPL19 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_020691 {REF} {Length: 1178} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.2]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=265, Expect=3e-91]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=249, Expect=2e-85]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=273, Expect=9e-95]} {RNA1509_5123} {RNA1310_33718} {RNA815_1809.2}

Mlig455_020758 {REF} {Length: 974} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.2]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=265, Expect=3e-91]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=249, Expect=2e-85]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=273, Expect=9e-95]} {RNA1509_34522, RNA1509_46007, RNA1509_5123, RNA1509_55374} {RNA1310_33718, RNA1509_34522, RNA1509_46007, RNA1509_5123, RNA1509_55374} {RNA1509_34522, RNA1509_46007, RNA1509_5123, RNA1509_55374, RNA815_1809.2}
2. MligTC455_24252 4573 95.27 Mlig455_067732

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.496/0.00030
Region-enriched R5: 1.039/0.00300

Regeneration-upregulated BL: 1.393

Regeneration-enriched BL: 1.393

HSPE1 1.842 0.959 - - - - 0.883 Mlig455_067732 {REF} {Length: 695} {TRANSSPLICED} {Pfam: Chaperonin 10 Kd subunit [PF00166.23, score=87.4]} {Human: ENSG00000115541, HSPE1, heat shock protein family E (Hsp10) member 1, [RH, Score=119, Expect=1e-35]} {Mouse: ENSMUSG00000073676, Hspe1, heat shock protein 1 (chaperonin 10), [RH, Score=119, Expect=5e-36]; ENSMUSG00000117621, AC117239.2, novel protein similar to Hspe1, [RH, Score=116, Expect=7e-35]} {Dmel: FBgn0036334, CG11267, [RH, Score=113, Expect=8e-34]} {Celegans: WBGene00021248, Y22D7AL.10, [RH, Score=115, Expect=1e-34]} {Smed: dd_Smed_v6_421_0_1, dd_Smed_v6_421_0_1, [RH, Score=122, Expect=1e-37]} {RNA1509_17704} {RNA1310_51233.2} {RNA815_25861}
3. MligTC455_18770 7146 148.88 Mlig455_034640, Mlig455_062634

Neo: Neoblast

Age: logFC(26M/2M)=0.357

Region-enriched R5: 1.356/0.00002
Region-enriched R4: 1.158/0.00489

Regeneration-enriched TP: 1.617
Regeneration-enriched BL: 1.217

SNU13 1.841 0.883 - - - - 0.958

Mlig455_034640 {REF} {Length: 638} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=95.8]; PELOTA RNA binding domain [PF15608.8, score=18.4]} {Human: ENSG00000100138, SNU13, small nuclear ribonucleoprotein 13, [RH, Score=184, Expect=8e-61]} {Mouse: ENSMUSG00000063480, Snu13, SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5), [RH, Score=184, Expect=5e-61]} {Dmel: FBgn0015393, hoip, hoi-polloi, [RH, Score=195, Expect=1e-65]} {Celegans: WBGene00010896, M28.5, NHP2-like protein 1 homolog, [RH, Score=171, Expect=3e-56]} {Smed: dd_Smed_v6_1928_0_1, dd_Smed_v6_1928_0_1, [RH, Score=156, Expect=2e-50]} {RNA1509_58876, RNA1509_8419} {RNA1310_54817, RNA1509_8419} {RNA1509_8419, RNA815_28959}

Mlig455_062634 {REF} {Length: 637} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=95.8]; PELOTA RNA binding domain [PF15608.8, score=18.4]} {Human: ENSG00000100138, SNU13, small nuclear ribonucleoprotein 13, [RH, Score=184, Expect=8e-61]} {Mouse: ENSMUSG00000063480, Snu13, SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5), [RH, Score=184, Expect=5e-61]} {Dmel: FBgn0015393, hoip, hoi-polloi, [RH, Score=195, Expect=1e-65]} {Celegans: WBGene00010896, M28.5, NHP2-like protein 1 homolog, [RH, Score=171, Expect=3e-56]} {Smed: dd_Smed_v6_1928_0_1, dd_Smed_v6_1928_0_1, [RH, Score=156, Expect=2e-50]} {RNA1509_14815, RNA1509_58876} {RNA1310_54817, RNA1509_14815, RNA1509_58876} {RNA1509_14815, RNA1509_58876, RNA815_28959}
4. MligTC455_24251 4643 96.72 Mlig455_000145

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.542/0.00021
Region-enriched R5: 1.049/0.00304

Regeneration-upregulated BL: 1.281

Regeneration-enriched BL: 1.281

HSPE1 1.829 0.961 - - - - 0.868 Mlig455_000145 {REF} {Length: 694} {TRANSSPLICED} {Pfam: Chaperonin 10 Kd subunit [PF00166.23, score=88.7]} {Human: ENSG00000115541, HSPE1, heat shock protein family E (Hsp10) member 1, [RH, Score=121, Expect=1e-36]} {Mouse: ENSMUSG00000073676, Hspe1, heat shock protein 1 (chaperonin 10), [RH, Score=122, Expect=5e-37]; ENSMUSG00000117621, AC117239.2, novel protein similar to Hspe1, [RH, Score=119, Expect=8e-36]} {Dmel: FBgn0036334, CG11267, [RH, Score=115, Expect=9e-35]} {Celegans: WBGene00021248, Y22D7AL.10, [RH, Score=117, Expect=2e-35]} {Smed: dd_Smed_v6_421_0_1, dd_Smed_v6_421_0_1, [RH, Score=124, Expect=2e-38]} {RNA1509_1412, RNA1509_17704} {RNA1310_51233.2, RNA1509_1412, RNA1509_17704} {RNA1509_1412, RNA1509_17704, RNA815_25861}
5. MligTC455_22474 660 13.76 Mlig455_001924

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.509/0.00004

DHRS1 1.823 - - - 0.950 - 0.873 Mlig455_001924 {REF} {Length: 1486} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=124.1]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=98.4]; KR domain [PF08659.12, score=29.1]} {Human: ENSG00000157379, DHRS1, dehydrogenase/reductase 1, [RH, Score=296, Expect=2e-99]; ENSG00000284868, DHRS1, dehydrogenase/reductase 1, [RH, Score=296, Expect=2e-99]} {Mouse: ENSMUSG00000002332, Dhrs1, dehydrogenase/reductase (SDR family) member 1, [RH, Score=302, Expect=5e-102]} {Dmel: FBgn0040349, CG3699, [Score=84.7, Expect=6e-19]} {Celegans: WBGene00000973, dhs-9, DeHydrogenases, Short chain, [RH, Score=318, Expect=1e-108]} {Smed: dd_Smed_v6_956_0_1, dd_Smed_v6_956_0_1, [Score=87.0, Expect=4e-19]} {RNA1509_18311, RNA1509_58296} {RNA1310_19029.1, RNA1509_58296} {RNA1509_58296, RNA815_9160}
6. MligTC455_23898 968 20.17 Mlig455_000510, Mlig455_027540

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.553/0.00042
Region-enriched R4: 2.203/0.02670

0.964 - - - - - 0.964

Mlig455_000510 {REF} {Length: 1286} {TRANSSPLICED} {RNA1509_15796} {RNA1310_22553.2, RNA1509_15796} {RNA1509_15796, RNA815_21620}

Mlig455_027540 {REF} {Length: 1287} {TRANSSPLICED} {RNA1509_15796, RNA1509_55654} {RNA1310_22553.2, RNA1509_55654} {RNA1509_55654, RNA815_21620}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA