TomoSeq data search

Data search

Results for MligTC455_32893

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32893	217	4.53	Mlig455_030980, Mlig455_069444	Neo: - Age: - Region-enriched R8: 3.219/0.04043	SND1	Mlig455_030980 {REF} {Length: 3685} {Pfam: Tudor domain [PF00567.26, score=69.5]; Staphylococcal nuclease homologue [PF00565.19, score=44.7]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [Score=226, Expect=1e-61]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [Score=229, Expect=7e-63]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [Score=223, Expect=7e-61]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [Score=213, Expect=2e-57]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [Score=212, Expect=4e-57]} {RNA1509_41393} {RNA1310_533.1, RNA1509_41393} {RNA1509_41393, RNA815_14452} Mlig455_069444 {REF} {Length: 3696} {Pfam: Tudor domain [PF00567.26, score=69.0]; Staphylococcal nuclease homologue [PF00565.19, score=42.6]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [Score=225, Expect=3e-61]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [Score=228, Expect=1e-62]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [Score=221, Expect=3e-60]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [Score=215, Expect=2e-58]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [Score=217, Expect=6e-59]} {RNA1509_41393} {RNA1310_533.1} {RNA815_14452}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32893

217

4.53

Mlig455_030980, Mlig455_069444

Neo: -

Age: -

Region-enriched R8: 3.219/0.04043

SND1

Mlig455_030980 {REF} {Length: 3685} {Pfam: Tudor domain [PF00567.26, score=69.5]; Staphylococcal nuclease homologue [PF00565.19, score=44.7]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [Score=226, Expect=1e-61]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [Score=229, Expect=7e-63]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [Score=223, Expect=7e-61]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [Score=213, Expect=2e-57]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [Score=212, Expect=4e-57]} {RNA1509_41393} {RNA1310_533.1, RNA1509_41393} {RNA1509_41393, RNA815_14452}

Mlig455_069444 {REF} {Length: 3696} {Pfam: Tudor domain [PF00567.26, score=69.0]; Staphylococcal nuclease homologue [PF00565.19, score=42.6]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [Score=225, Expect=3e-61]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [Score=228, Expect=1e-62]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [Score=221, Expect=3e-60]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [Score=215, Expect=2e-58]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [Score=217, Expect=6e-59]} {RNA1509_41393} {RNA1310_533.1} {RNA815_14452}

Cumulative graph for MligTC455_32893

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-8.538	2.892	0.01387	0.33180
RegionR2	2.554	2.892	0.02719	0.18561
RegionR3	0.53	2.892	0.60923	1.00000
RegionR4	-0.58	2.892	0.96697	1.00000
RegionR5	1.47	2.892	0.09501	0.29485
RegionR6	1.228	2.892	0.21042	0.78784
RegionR7	0.117	2.892	0.82094	1.00000
RegionR8	3.219	2.892	0.00082	0.04043

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.098	2.892	0.99980	1.00000
RegenerationR2	0.125	2.892	0.88504	1.00000
RegenerationR3	1.521	2.892	0.12170	0.54083
RegenerationR4	0.066	2.892	0.92189	1.00000
RegenerationR5	-0.317	2.892	0.74163	0.96939
RegenerationR6	0.721	2.892	0.42596	0.75530
RegenerationBL	-4.652	2.892	0.05690	0.27644
RegenerationTP	-0.076	2.892	0.96502	1.00000

Genes with expression patterns similar to MligTC455_32893

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32893	217	4.53	Mlig455_030980, Mlig455_069444	Neo: - Age: - Region-enriched R8: 3.219/0.04043	SND1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_030980 {REF} {Length: 3685} {Pfam: Tudor domain [PF00567.26, score=69.5]; Staphylococcal nuclease homologue [PF00565.19, score=44.7]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [Score=226, Expect=1e-61]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [Score=229, Expect=7e-63]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [Score=223, Expect=7e-61]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [Score=213, Expect=2e-57]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [Score=212, Expect=4e-57]} {RNA1509_41393} {RNA1310_533.1, RNA1509_41393} {RNA1509_41393, RNA815_14452} Mlig455_069444 {REF} {Length: 3696} {Pfam: Tudor domain [PF00567.26, score=69.0]; Staphylococcal nuclease homologue [PF00565.19, score=42.6]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [Score=225, Expect=3e-61]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [Score=228, Expect=1e-62]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [Score=221, Expect=3e-60]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [Score=215, Expect=2e-58]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [Score=217, Expect=6e-59]} {RNA1509_41393} {RNA1310_533.1} {RNA815_14452}
2.	MligTC455_14943	25	0.52	Mlig455_014051	Neo: - Age: Down-Up-Down		0.971	-	-	0.971	-	-	-	Mlig455_014051 {REF} {Length: 3664} {Pfam: CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 [PF07878.13, score=19.3]} {RNA1509_603} {RNA1310_12687} {RNA815_7928}
3.	MligTC455_12081	45	0.94	Mlig455_003451	Neo: - Age: -		0.969	-	-	0.969	-	-	-	Mlig455_003451 {REF} {Length: 4735} {NoTransDecoderORF} {RNA1509_7715} {RNA1310_34462} {RNA815_24734}
4.	MligTC455_03889	198	4.12	Mlig455_011519	Neo: Int S/G2/M Age: - Region-enriched R5: 2.193/0.00342		0.967	-	-	-	0.967	-	-	Mlig455_011519 {REF} {Length: 1539} {RNA1509_29174} {RNA1310_34623} {RNA815_15967}
5.	MligTC455_11849	277	5.77	Mlig455_026098	Neo: Int S/G2/M Age: Up-Down-Down	ANAPC1	0.955	-	-	-	0.955	-	-	Mlig455_026098 {REF} {Length: 8230} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 1 [PF12859.9, score=22.7]} {Human: ENSG00000153107, ANAPC1, anaphase promoting complex subunit 1, [RH, Score=204, Expect=5e-52]} {Mouse: ENSMUSG00000014355, Anapc1, anaphase promoting complex subunit 1, [RH, Score=206, Expect=2e-52]} {Dmel: FBgn0004391, shtd, shattered, [RH, Score=214, Expect=3e-55]} {Celegans: WBGene00003133, mat-2, Anaphase-promoting complex subunit 1, [Score=178, Expect=2e-44]} {Smed: dd_Smed_v6_8329_0_1, dd_Smed_v6_8329_0_1, [Score=165, Expect=1e-41]} {RNA1509_37581, RNA1509_9751} {RNA1310_441.1, RNA1509_37581} {RNA1509_37581, RNA815_441.1}
6.	MligTC455_19389	78	1.62	Mlig455_002228	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_002228 {REF} {Length: 1094} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=42.6]} {Smed: dd_Smed_v6_7982_0_1, dd_Smed_v6_7982_0_1, [Score=97.1, Expect=1e-22]} {RNA1509_55345} {RNA1310_104122} {RNA815_37548}
7.	MligTC455_52791	60	1.25	Mlig455_056459	Neo: - Age: Down-Up-Up	KY	0.953	-	-	-	-	0.953	-	Mlig455_056459 {REF} {Length: 2198} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=49.1]; Transglutaminase-like domain [PF04473.14, score=18.5]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=182, Expect=2e-49]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=177, Expect=6e-48]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=102, Expect=2e-22]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=98.2, Expect=1e-21]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=122, Expect=4e-29]} {RNA1509_41238} {RNA1310_9626} {RNA815_5945}
8.	MligTC455_24668	38	0.8	Mlig455_035740	Neo: - Age: -	KCNMA1	0.951	-	-	-	-	0.951	-	Mlig455_035740 {REF} {Length: 4909} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=109.5]; Ion transport protein [PF00520.33, score=64.8]; Ion channel [PF07885.18, score=58.5]; Ligand-gated ion channel [PF00060.28, score=22.0]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=890, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=889, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=909, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=852, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=817, Expect=0.0]} {RNA1509_20450} {RNA1310_2582} {RNA815_1358}