M. lignano Tomo-Seq
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Results for MligTC455_32898

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32898 532 11.08 Mlig455_020431, Mlig455_020442

Neo: -

Age: -

 ZFYVE19

Mlig455_020431 {REF} {Length: 1370} {Pfam: FYVE zinc finger [PF01363.23, score=26.4]} {Human: ENSG00000166140, ZFYVE19, zinc finger FYVE-type containing 19, [RH, Score=86.3, Expect=2e-18]} {Mouse: ENSMUSG00000068580, Zfyve19, zinc finger, FYVE domain containing 19, [RH, Score=116, Expect=1e-28]} {Dmel: FBgn0030694, CG15602, [Score=73.2, Expect=4e-14]} {RNA1509_34537, RNA1509_42277} {RNA1310_26483.2, RNA1509_34537, RNA1509_42277} {RNA1509_34537, RNA1509_42277, RNA815_23338}

Mlig455_020442 {REF} {Length: 1365} {Pfam: FYVE zinc finger [PF01363.23, score=26.4]} {Human: ENSG00000166140, ZFYVE19, zinc finger FYVE-type containing 19, [RH, Score=86.3, Expect=2e-18]} {Mouse: ENSMUSG00000068580, Zfyve19, zinc finger, FYVE domain containing 19, [RH, Score=116, Expect=1e-28]} {Dmel: FBgn0030694, CG15602, [Score=73.2, Expect=4e-14]} {RNA1509_42277} {RNA1310_26483.2} {RNA815_23338}

Cumulative graph for MligTC455_32898

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.627 3.872 0.28474 0.93641
RegionR2 -0.205 3.872 0.78192 1.00000
RegionR3 0.267 3.872 0.65182 1.00000
RegionR4 0.592 3.872 0.36869 0.69196
RegionR5 1.119 3.872 0.02776 0.12252
RegionR6 -0.061 3.872 0.91925 1.00000
RegionR7 -1.017 3.872 0.18544 0.78638
RegionR8 0.933 3.872 0.19103 0.78244

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.523 3.872 0.31076 1.00000
RegenerationR2 0.365 3.872 0.58295 0.90839
RegenerationR3 -0.47 3.872 0.50038 0.85734
RegenerationR4 -1.248 3.872 0.09003 0.46991
RegenerationR5 -1.654 3.872 0.01405 0.20704
RegenerationR6 -0.004 3.872 0.99589 1.00000
RegenerationBL 0.497 3.872 0.47070 0.83700
RegenerationTP 0.764 3.872 0.31740 0.76235


Genes with expression patterns similar to MligTC455_32898

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32898 532 11.08 Mlig455_020431, Mlig455_020442

Neo: -

Age: -

 ZFYVE19 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_020431 {REF} {Length: 1370} {Pfam: FYVE zinc finger [PF01363.23, score=26.4]} {Human: ENSG00000166140, ZFYVE19, zinc finger FYVE-type containing 19, [RH, Score=86.3, Expect=2e-18]} {Mouse: ENSMUSG00000068580, Zfyve19, zinc finger, FYVE domain containing 19, [RH, Score=116, Expect=1e-28]} {Dmel: FBgn0030694, CG15602, [Score=73.2, Expect=4e-14]} {RNA1509_34537, RNA1509_42277} {RNA1310_26483.2, RNA1509_34537, RNA1509_42277} {RNA1509_34537, RNA1509_42277, RNA815_23338}

Mlig455_020442 {REF} {Length: 1365} {Pfam: FYVE zinc finger [PF01363.23, score=26.4]} {Human: ENSG00000166140, ZFYVE19, zinc finger FYVE-type containing 19, [RH, Score=86.3, Expect=2e-18]} {Mouse: ENSMUSG00000068580, Zfyve19, zinc finger, FYVE domain containing 19, [RH, Score=116, Expect=1e-28]} {Dmel: FBgn0030694, CG15602, [Score=73.2, Expect=4e-14]} {RNA1509_42277} {RNA1310_26483.2} {RNA815_23338}
2. MligTC455_25694 254 5.29 Mlig455_055763

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.769/0.01268

 PBK 1.727 0.776 - - - - 0.951 Mlig455_055763 {REF} {Length: 1808} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=112.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.7]; Kinase-like [PF14531.8, score=26.1]} {Human: ENSG00000168078, PBK, PDZ binding kinase, [RH, Score=153, Expect=2e-43]} {Mouse: ENSMUSG00000022033, Pbk, PDZ binding kinase, [RH, Score=150, Expect=3e-42]} {Dmel: FBgn0030864, CG8173, [RH, Score=157, Expect=2e-44]} {Celegans: WBGene00017033, nekl-4, Serine/threonine-protein kinase D1044.8, [Score=95.9, Expect=2e-21]} {Smed: dd_Smed_v6_4784_0_2, dd_Smed_v6_4784_0_2, [Score=86.7, Expect=1e-18]} {RNA1509_24167, RNA1509_43945} {RNA1310_28898, RNA1509_43945} {RNA1509_43945, RNA815_22190}
3. MligTC455_31819 350 7.3 Mlig455_064583

Neo: -

Age: -

 C16orf58 0.96 - - - - - 0.960 Mlig455_064583 {REF} {Length: 1847} {TRANSSPLICED} {Pfam: Vitamin B6 photo-protection and homoeostasis [PF04884.16, score=289.7]} {Human: ENSG00000140688, C16orf58, chromosome 16 open reading frame 58, [RH, Score=241, Expect=2e-74]} {Mouse: ENSMUSG00000030780, BC017158, cDNA sequence BC017158, [RH, Score=242, Expect=8e-75]} {Dmel: FBgn0032700, CG10338, [RH, Score=214, Expect=8e-65]} {Smed: dd_Smed_v6_6378_0_4, dd_Smed_v6_6378_0_4, [RH, Score=287, Expect=6e-93]} {RNA1509_36579, RNA1509_53526} {RNA1310_21475.1, RNA1509_36579, RNA1509_53526} {RNA1509_36579, RNA1509_53526, RNA815_12880}
4. MligTC455_42793 226 4.7 Mlig455_050974

Neo: -

Age: -

 WTAP 0.955 - - - - - 0.955 Mlig455_050974 {REF} {Length: 1345} {TRANSSPLICED} {Pfam: WTAP/Mum2p family [PF17098.7, score=159.6]} {Human: ENSG00000146457, WTAP, WT1 associated protein, [RH, Score=154, Expect=2e-44]} {Mouse: ENSMUSG00000060475, Wtap, Wilms tumour 1-associating protein, [RH, Score=154, Expect=1e-44]} {Dmel: FBgn0000662, fl(2)d, female lethal d, [RH, Score=160, Expect=7e-46]} {Smed: dd_Smed_v6_2322_0_4, dd_Smed_v6_2322_0_4, [RH, Score=151, Expect=3e-42]} {RNA1509_18776, RNA1509_34568} {RNA1310_27242, RNA1509_18776, RNA1509_34568} {RNA1509_18776, RNA1509_34568, RNA815_24536}

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