TomoSeq data search

Data search

Results for MligTC455_32899

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32899	66983	1395.48	Mlig455_048546, Mlig455_053330	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.207	RPL19	Mlig455_048546 {REF} {Length: 964} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.2]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=265, Expect=3e-91]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=249, Expect=2e-85]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=273, Expect=9e-95]} {RNA1509_341, RNA1509_3580, RNA1509_668} {RNA1310_39193, RNA1509_341, RNA1509_3580, RNA1509_668} {RNA1509_341, RNA1509_3580, RNA1509_668, RNA815_1809.1} Mlig455_053330 {REF} {Length: 715} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.1]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=262, Expect=1e-89]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=262, Expect=8e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=248, Expect=1e-84]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=271, Expect=5e-94]} {RNA1509_341} {RNA1310_39193} {RNA815_1809.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32899

66983

1395.48

Mlig455_048546, Mlig455_053330

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.207

RPL19

Mlig455_048546 {REF} {Length: 964} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.2]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=265, Expect=3e-91]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=249, Expect=2e-85]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=273, Expect=9e-95]} {RNA1509_341, RNA1509_3580, RNA1509_668} {RNA1310_39193, RNA1509_341, RNA1509_3580, RNA1509_668} {RNA1509_341, RNA1509_3580, RNA1509_668, RNA815_1809.1}

Mlig455_053330 {REF} {Length: 715} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.1]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=262, Expect=1e-89]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=262, Expect=8e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=248, Expect=1e-84]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=271, Expect=5e-94]} {RNA1509_341} {RNA1310_39193} {RNA815_1809.1}

Cumulative graph for MligTC455_32899

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.766	10.502	0.02133	0.39925
RegionR2	-0.468	10.502	0.11547	0.42051
RegionR3	0.186	10.502	0.46965	0.97537
RegionR4	0.478	10.502	0.08622	0.27857
RegionR5	0.287	10.502	0.25078	0.56706
RegionR6	0.18	10.502	0.48066	1.00000
RegionR7	0.127	10.502	0.61293	1.00000
RegionR8	-0.025	10.502	0.92740	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.74	10.502	0.05902	0.72533
RegenerationR2	-0.323	10.502	0.33559	0.77138
RegenerationR3	-0.552	10.502	0.10305	0.50998
RegenerationR4	-0.634	10.502	0.06834	0.41698
RegenerationR5	-0.773	10.502	0.02178	0.25491
RegenerationR6	-0.647	10.502	0.05565	0.29593
RegenerationBL	-0.336	10.502	0.24073	0.59394
RegenerationTP	-0.277	10.502	0.36546	0.80407

Genes with expression patterns similar to MligTC455_32899

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32899	66983	1395.48	Mlig455_048546, Mlig455_053330	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.207	RPL19	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048546 {REF} {Length: 964} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.2]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=265, Expect=3e-91]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=249, Expect=2e-85]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=273, Expect=9e-95]} {RNA1509_341, RNA1509_3580, RNA1509_668} {RNA1310_39193, RNA1509_341, RNA1509_3580, RNA1509_668} {RNA1509_341, RNA1509_3580, RNA1509_668, RNA815_1809.1} Mlig455_053330 {REF} {Length: 715} {Pfam: Ribosomal protein L19e [PF01280.22, score=208.1]} {Human: ENSG00000108298, RPL19, ribosomal protein L19, [RH, Score=262, Expect=1e-89]} {Mouse: ENSMUSG00000017404, Rpl19, ribosomal protein L19, [RH, Score=262, Expect=8e-90]} {Dmel: FBgn0285950, RpL19, Ribosomal protein L19, [RH, Score=263, Expect=2e-90]} {Celegans: WBGene00004431, rpl-19, 60S ribosomal protein L19, [RH, Score=248, Expect=1e-84]} {Smed: dd_Smed_v6_228_0_1, dd_Smed_v6_228_0_1, [RH, Score=271, Expect=5e-94]} {RNA1509_341} {RNA1310_39193} {RNA815_1809.1}
2.	MligTC455_15861	437	9.1	Mlig455_040101	Neo: - Age: - Region-enriched R5: 1.493/0.04706	JADE2	0.951	-	-	-	-	-	0.951	Mlig455_040101 {REF} {Length: 4681} {TRANSSPLICED} {Pfam: PHD-like zinc-binding domain [PF13771.8, score=60.7]; PHD-zinc-finger like domain [PF13832.8, score=54.6]; PHD-finger [PF13831.8, score=42.1]; PHD-finger [PF00628.31, score=38.1]} {Human: ENSG00000043143, JADE2, jade family PHD finger 2, [Score=229, Expect=9e-64]; ENSG00000077684, JADE1, jade family PHD finger 1, [Score=219, Expect=6e-60]} {Mouse: ENSMUSG00000020387, Jade2, jade family PHD finger 2, [Score=232, Expect=8e-65]; ENSMUSG00000037315, Jade3, jade family PHD finger 3, [Score=221, Expect=6e-61]} {Dmel: FBgn0035106, rno, rhinoceros, [Score=258, Expect=3e-72]} {Celegans: WBGene00003034, lin-49, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_11492_0_2, dd_Smed_v6_11492_0_2, [Score=181, Expect=8e-48]} {RNA1509_19183} {RNA1310_8084, RNA1509_19183} {RNA1509_19183, RNA815_25893}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_32899

66983

1395.48

Mlig455_048546, Mlig455_053330

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.207

RPL19

1.000

MligTC455_15861

437

9.1

Mlig455_040101

Neo: -

Age: -

Region-enriched R5: 1.493/0.04706

JADE2

0.951

Mlig455_040101 {REF} {Length: 4681} {TRANSSPLICED} {Pfam: PHD-like zinc-binding domain [PF13771.8, score=60.7]; PHD-zinc-finger like domain [PF13832.8, score=54.6]; PHD-finger [PF13831.8, score=42.1]; PHD-finger [PF00628.31, score=38.1]} {Human: ENSG00000043143, JADE2, jade family PHD finger 2, [Score=229, Expect=9e-64]; ENSG00000077684, JADE1, jade family PHD finger 1, [Score=219, Expect=6e-60]} {Mouse: ENSMUSG00000020387, Jade2, jade family PHD finger 2, [Score=232, Expect=8e-65]; ENSMUSG00000037315, Jade3, jade family PHD finger 3, [Score=221, Expect=6e-61]} {Dmel: FBgn0035106, rno, rhinoceros, [Score=258, Expect=3e-72]} {Celegans: WBGene00003034, lin-49, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_11492_0_2, dd_Smed_v6_11492_0_2, [Score=181, Expect=8e-48]} {RNA1509_19183} {RNA1310_8084, RNA1509_19183} {RNA1509_19183, RNA815_25893}