Data search


search
Exact
Search

Results for MligTC455_33010

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33010 513 10.68 Mlig455_032403, Mlig455_032419

Neo: -

Age: -

Mlig455_032403 {REF} {Length: 2163} {RNA1509_18620, RNA1509_52989} {RNA1310_18002, RNA1509_18620, RNA1509_52989} {RNA1509_18620, RNA1509_52989, RNA815_6642.1}

Mlig455_032419 {REF} {Length: 3265} {RNA1509_18620} {RNA1310_18002} {RNA815_6642.1}

Cumulative graph for MligTC455_33010

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.051 3.84 0.33258 0.97862
RegionR2 0.012 3.84 0.98671 1.00000
RegionR3 0.596 3.84 0.31831 0.85657
RegionR4 1.682 3.84 0.02397 0.11576
RegionR5 0.332 3.84 0.59464 0.95259
RegionR6 0.062 3.84 0.91574 1.00000
RegionR7 0.27 3.84 0.73075 1.00000
RegionR8 -0.902 3.84 0.52542 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.722 3.84 0.47449 1.00000
RegenerationR2 0.206 3.84 0.70750 0.95881
RegenerationR3 0.05 3.84 0.94773 1.00000
RegenerationR4 -0.021 3.84 0.98232 1.00000
RegenerationR5 0.15 3.84 0.79218 0.98653
RegenerationR6 0.099 3.84 0.88087 1.00000
RegenerationBL 0.317 3.84 0.68154 1.00000
RegenerationTP 0.899 3.84 0.31239 0.75688


Genes with expression patterns similar to MligTC455_33010

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33010 513 10.68 Mlig455_032403, Mlig455_032419

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_032403 {REF} {Length: 2163} {RNA1509_18620, RNA1509_52989} {RNA1310_18002, RNA1509_18620, RNA1509_52989} {RNA1509_18620, RNA1509_52989, RNA815_6642.1}

Mlig455_032419 {REF} {Length: 3265} {RNA1509_18620} {RNA1310_18002} {RNA815_6642.1}
2. MligTC455_29219 2693 56.11 Mlig455_036871

Neo: -

Age: Up-Down-Down

KIF16B 0.956 - - - 0.956 - - Mlig455_036871 {REF} {Length: 42846} {Pfam: Kinesin motor domain [PF00225.25, score=340.4]; Helix-turn-helix [PF01381.24, score=163.7]; Kinetoplastid membrane protein 11 [PF03037.18, score=119.2]; Aminoacyl tRNA synthetase class II, N-terminal domain [PF02912.20, score=96.0]; Family of unknown function (DUF6374) [PF19901.1, score=84.0]; Microtubule binding [PF16796.7, score=80.4]; HHH domain [PF17674.3, score=73.6]; Maf N-terminal region [PF08383.13, score=31.8]; FHA domain [PF00498.28, score=27.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=20.8]} {Human: ENSG00000089177, KIF16B, kinesin family member 16B, [Score=463, Expect=1e-134]} {Mouse: ENSMUSG00000038844, Kif16b, kinesin family member 16B, [Score=456, Expect=1e-132]} {Dmel: FBgn0004387, Klp98A, Kinesin-like protein at 98A, [Score=429, Expect=2e-124]} {Celegans: WBGene00006831, unc-104, Kinesin-like protein unc-104, [Score=332, Expect=7e-91]} {Smed: dd_Smed_v6_7089_0_1, dd_Smed_v6_7089_0_1, [Score=335, Expect=5e-93]} {RNA1509_50040} {RNA1310_688} {RNA815_352}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA