Data search
Results for MligTC455_33020
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33020 | 20 | 0.41 | Mlig455_029795 | Neo: - Age: Up-Down-Down |
CNOT1 | Mlig455_029795 {REF} {Length: 10689} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=389.7]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=260.7]; Domain of unknown function (DUF3819) [PF12842.9, score=125.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=58.6]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=44.8]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [Score=780, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [Score=780, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=659, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [Score=557, Expect=8e-164]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [Score=910, Expect=0.0]} {RNA1509_1462, RNA1509_37056} {RNA1310_198.1, RNA1509_37056} {RNA1509_37056, RNA815_2251} |
Cumulative graph for MligTC455_33020
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_33020
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33020 | 20 | 0.41 | Mlig455_029795 | Neo: - Age: Up-Down-Down |
CNOT1 | 1 | - | - | - | - | - | 1.000 | Mlig455_029795 {REF} {Length: 10689} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=389.7]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=260.7]; Domain of unknown function (DUF3819) [PF12842.9, score=125.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=58.6]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=44.8]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [Score=780, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [Score=780, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=659, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [Score=557, Expect=8e-164]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [Score=910, Expect=0.0]} {RNA1509_1462, RNA1509_37056} {RNA1310_198.1, RNA1509_37056} {RNA1509_37056, RNA815_2251} |
| 2. | MligTC455_48335 | 529 | 11.02 | Mlig455_059727 | Neo: Int S/G2/M Age: - |
STT3A | 0.968 | - | - | - | - | - | 0.968 | Mlig455_059727 {REF} {Length: 3414} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=490.4]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.3]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1102, Expect=0.0]} {RNA1509_7265} {RNA1310_3970, RNA1509_7265} {RNA1509_7265, RNA815_3344} |
| 3. | MligTC455_15523 | 25 | 0.52 | Mlig455_061322 | Neo: - Age: - Regeneration-upregulated R6: 2.285 Regeneration-enriched R6: 2.285 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_061322 {REF} {Length: 2023} {NoTransDecoderORF} {RNA1509_48039} {RNA1310_131258} {RNA815_17012.2} | |
| 4. | MligTC455_38280 | 100 | 2.07 | Mlig455_033093, Mlig455_033122 | Neo: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_033093 {REF} {Length: 3530} {RNA1509_11684} {RNA1310_5094, RNA1509_11684} {RNA1509_11684, RNA815_8034} Mlig455_033122 {REF} {Length: 1914} {RNA1509_11684} {RNA1310_5094} {RNA815_8034} |
|
| 5. | MligTC455_51736 | 34 | 0.72 | Mlig455_060266 | Neo: - Age: Up-Down-Down |
HFM1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_060266 {REF} {Length: 4618} {Pfam: Sec63 Brl domain [PF02889.18, score=65.7]; Helicase conserved C-terminal domain [PF00271.33, score=29.7]; Helix-hairpin-helix domain [PF14520.8, score=22.7]} {Human: ENSG00000162669, HFM1, HFM1, ATP dependent DNA helicase homolog, [Score=360, Expect=1e-102]} {Mouse: ENSMUSG00000043410, Hfm1, HFM1, ATP-dependent DNA helicase homolog, [Score=357, Expect=6e-102]} {Dmel: FBgn0263599, l(3)72Ab, lethal (3) 72Ab, [Score=173, Expect=4e-43]} {Celegans: WBGene00012896, snrp-200, Putative U5 small nuclear ribonucleoprotein 200 kDa helicase, [Score=167, Expect=2e-41]} {Smed: dd_Smed_v6_24408_0_4, dd_Smed_v6_24408_0_4, [Score=320, Expect=6e-91]} {RNA1509_54934} {RNA1310_28874.1} {RNA815_50448} |
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