Data search
Results for MligTC455_33054
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33054 | 850 | 17.71 | Mlig455_051058 | Neo: Int S/G2/M Age: Up-Down-Down |
ZFR2 | Mlig455_051058 {REF} {Length: 3920} {Pfam: DZF domain [PF07528.16, score=183.6]} {Human: ENSG00000105278, ZFR2, zinc finger RNA binding protein 2, [Score=345, Expect=3e-104]} {Mouse: ENSMUSG00000034949, Zfr2, zinc finger RNA binding protein 2, [RH, Score=349, Expect=2e-106]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [Score=353, Expect=6e-108]} {Celegans: WBGene00022388, Y95B8A.8, [Score=186, Expect=6e-49]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [Score=386, Expect=8e-121]} {RNA1509_37130, RNA1509_8604} {RNA1310_7733.1, RNA1509_37130} {RNA1509_37130, RNA815_8666} |
Cumulative graph for MligTC455_33054
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.087 | 4.356 | 0.21803 | 0.86041 | |
| RegionR2 | 0.509 | 4.356 | 0.36521 | 0.75967 | |
| RegionR3 | -0.898 | 4.356 | 0.06474 | 0.44904 | |
| RegionR4 | 0.389 | 4.356 | 0.42773 | 0.75600 | |
| RegionR5 | 0.235 | 4.356 | 0.54533 | 0.90733 | |
| RegionR6 | -0.704 | 4.356 | 0.14604 | 0.68303 | |
| RegionR7 | -0.48 | 4.356 | 0.45021 | 1.00000 | |
| RegionR8 | -0.138 | 4.356 | 0.85773 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.238 | 4.356 | 0.84924 | 1.00000 | |
| RegenerationR2 | 1.015 | 4.356 | 0.03702 | 0.31805 | |
| RegenerationR3 | 1.741 | 4.356 | 0.00284 | 0.09361 | |
| RegenerationR4 | 0.524 | 4.356 | 0.33000 | 0.76422 | |
| RegenerationR5 | 0.781 | 4.356 | 0.11032 | 0.50201 | |
| RegenerationR6 | 1.748 | 4.356 | 0.00198 | 0.05072 | |
| RegenerationBL | 1.828 | 4.356 | 0.00164 | 0.03182 | |
| RegenerationTP | 0.089 | 4.356 | 0.90755 | 1.00000 |
Genes with expression patterns similar to MligTC455_33054
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33054 | 850 | 17.71 | Mlig455_051058 | Neo: Int S/G2/M Age: Up-Down-Down |
ZFR2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051058 {REF} {Length: 3920} {Pfam: DZF domain [PF07528.16, score=183.6]} {Human: ENSG00000105278, ZFR2, zinc finger RNA binding protein 2, [Score=345, Expect=3e-104]} {Mouse: ENSMUSG00000034949, Zfr2, zinc finger RNA binding protein 2, [RH, Score=349, Expect=2e-106]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [Score=353, Expect=6e-108]} {Celegans: WBGene00022388, Y95B8A.8, [Score=186, Expect=6e-49]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [Score=386, Expect=8e-121]} {RNA1509_37130, RNA1509_8604} {RNA1310_7733.1, RNA1509_37130} {RNA1509_37130, RNA815_8666} |
| 2. | MligTC455_48328 | 488 | 10.16 | Mlig455_032174 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.297 Region-enriched R5: 1.173/0.01345 |
SIRT7 | 1.838 | - | - | - | 0.888 | - | 0.950 | Mlig455_032174 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: Sir2 family [PF02146.19, score=63.2]} {Human: ENSG00000187531, SIRT7, sirtuin 7, [Score=179, Expect=2e-50]} {Mouse: ENSMUSG00000025138, Sirt7, sirtuin 7, [Score=176, Expect=1e-49]} {Dmel: FBgn0039631, Sirt7, Sirtuin 7, [Score=166, Expect=7e-44]} {Celegans: WBGene00004803, sir-2.4, NAD-dependent protein deacetylase sir-2.4, [Score=60.1, Expect=9e-10]} {Smed: dd_Smed_v6_10564_0_1, dd_Smed_v6_10564_0_1, [Score=99.8, Expect=4e-23]} {RNA1509_31966} {RNA1310_26766, RNA1509_31966} {RNA1509_31966, RNA815_16969} |
| 3. | MligTC455_47120 | 1466 | 30.53 | Mlig455_023466, Mlig455_068137 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.098/0.00077 |
MED4 | 1.659 | - | 0.709 | - | - | - | 0.950 | Mlig455_023466 {REF} {Length: 1078} {TRANSSPLICED} {Pfam: Vitamin-D-receptor interacting Mediator subunit 4 [PF10018.11, score=64.5]; Anti-sigma-K factor rskA [PF10099.11, score=20.7]} {Human: ENSG00000136146, MED4, mediator complex subunit 4, [RH, Score=118, Expect=3e-31]} {Mouse: ENSMUSG00000022109, Med4, mediator complex subunit 4, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0035754, MED4, Mediator complex subunit 4, [RH, Score=113, Expect=1e-29]} {Celegans: WBGene00007012, mdt-4, Mediator of RNA polymerase II transcription subunit 4, [RH, Score=77.4, Expect=3e-16]} {RNA1509_21858, RNA1509_54060} {RNA1310_36804, RNA1509_54060} {RNA1509_54060, RNA815_15027} Mlig455_068137 {REF} {Length: 1104} {TRANSSPLICED} {Pfam: Vitamin-D-receptor interacting Mediator subunit 4 [PF10018.11, score=64.5]; Anti-sigma-K factor rskA [PF10099.11, score=20.7]} {Human: ENSG00000136146, MED4, mediator complex subunit 4, [RH, Score=118, Expect=3e-31]} {Mouse: ENSMUSG00000022109, Med4, mediator complex subunit 4, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0035754, MED4, Mediator complex subunit 4, [RH, Score=113, Expect=1e-29]} {Celegans: WBGene00007012, mdt-4, Mediator of RNA polymerase II transcription subunit 4, [RH, Score=77.4, Expect=3e-16]} {RNA1509_21858} {RNA1310_36804, RNA1509_21858} {RNA1509_21858, RNA815_15027} |
| 4. | MligTC455_44932 | 1758 | 36.62 | Mlig455_063954 | Neo: - Age: - |
SRRT | 1.658 | - | - | - | - | 0.703 | 0.955 | Mlig455_063954 {REF} {Length: 3567} {TRANSSPLICED} {Pfam: Arsenite-resistance protein 2 [PF04959.15, score=139.0]; SERRATE/Ars2, N-terminal domain [PF12066.10, score=107.3]} {Human: ENSG00000087087, SRRT, serrate, RNA effector molecule, [RH, Score=385, Expect=2e-118]} {Mouse: ENSMUSG00000037364, Srrt, serrate RNA effector molecule homolog (Arabidopsis), [RH, Score=383, Expect=1e-117]} {Dmel: FBgn0033062, Ars2, Arsenic resistance protein 2, [RH, Score=488, Expect=1e-156]} {Celegans: WBGene00017085, E01A2.2, Serrate RNA effector molecule homolog, [RH, Score=319, Expect=1e-95]} {Smed: dd_Smed_v6_1872_0_1, dd_Smed_v6_1872_0_1, [RH, Score=449, Expect=7e-144]} {RNA1509_14254, RNA1509_21576, RNA1509_29368} {RNA1310_3591.1, RNA1509_14254, RNA1509_21576} {RNA1509_14254, RNA1509_21576, RNA815_1242.1} |
| 5. | MligTC455_44103 | 1151 | 23.97 | Mlig455_048968 | Neo: Neoblast Age: - |
0.975 | - | - | - | 0.975 | - | - | Mlig455_048968 {REF} {Length: 1179} {TRANSSPLICED} {Pfam: Proteasome assembly chaperone 4 [PF16094.7, score=131.3]} {Smed: dd_Smed_v6_8414_0_1, dd_Smed_v6_8414_0_1, [RH, Score=66.6, Expect=1e-12]} {RNA1509_23893, RNA1509_34665} {RNA1310_9215, RNA1509_23893, RNA1509_34665} {RNA1509_23893, RNA1509_34665, RNA815_22970} | |
| 6. | MligTC455_19053 | 619 | 12.89 | Mlig455_004599, Mlig455_004706 | Neo: Int S/G2/M Age: - Region-enriched R5: 5.307/0.00000 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_004599 {REF} {Length: 1465} {RNA1509_58118} {RNA1310_24244} {RNA815_34383} Mlig455_004706 {REF} {Length: 1478} {RNA1509_58118} {RNA1310_24244} {RNA815_34383} |
|
| 7. | MligTC455_24069 | 860 | 17.93 | Mlig455_052618, Mlig455_052662 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.370/0.00048 |
MXD4 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_052618 {REF} {Length: 2762} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=32.9]} {Human: ENSG00000123933, MXD4, MAX dimerization protein 4, [RH, Score=56.2, Expect=9e-09]} {Mouse: ENSMUSG00000037235, Mxd4, Max dimerization protein 4, [RH, Score=59.7, Expect=5e-10]} {Dmel: FBgn0023215, Mnt, [RH, Score=59.3, Expect=3e-09]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=50.1, Expect=9e-07]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [RH, Score=56.6, Expect=5e-09]} {RNA1509_24438} {RNA1310_17333} {RNA815_9997.1} Mlig455_052662 {REF} {Length: 2776} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=32.9]} {Human: ENSG00000123933, MXD4, MAX dimerization protein 4, [RH, Score=56.6, Expect=8e-09]} {Mouse: ENSMUSG00000037235, Mxd4, Max dimerization protein 4, [RH, Score=59.7, Expect=4e-10]} {Dmel: FBgn0023215, Mnt, [RH, Score=59.3, Expect=2e-09]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=50.1, Expect=9e-07]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [RH, Score=56.6, Expect=4e-09]} {RNA1509_19157, RNA1509_24438} {RNA1310_17333, RNA1509_19157} {RNA1509_19157, RNA815_9997.1} |
| 8. | MligTC455_16153 | 266 | 5.54 | Mlig455_024955 | Neo: Irradiation Age: - |
CCNH | 0.95 | - | - | - | - | - | 0.950 | Mlig455_024955 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=37.8]; Cyclin C-terminal domain [PF16899.7, score=33.0]} {Human: ENSG00000134480, CCNH, cyclin H, [RH, Score=161, Expect=8e-47]} {Mouse: ENSMUSG00000021548, Ccnh, cyclin H, [RH, Score=159, Expect=3e-46]} {Dmel: FBgn0022936, CycH, Cyclin H, [RH, Score=199, Expect=2e-61]} {Celegans: WBGene00021714, cyh-1, CYclin H, [RH, Score=109, Expect=2e-27]} {Smed: dd_Smed_v6_10725_0_1, dd_Smed_v6_10725_0_1, [RH, Score=147, Expect=5e-42]} {RNA1509_17134} {RNA1310_27615.1} {RNA815_15261} |
| 9. | MligTC455_19490 | 590 | 12.3 | Mlig455_043951 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.425 Region-enriched R5: 1.300/0.00946 |
NELFA | 0.95 | - | - | - | 0.950 | - | - | Mlig455_043951 {REF} {Length: 3184} {Human: ENSG00000185049, NELFA, negative elongation factor complex member A, [RH, Score=86.3, Expect=4e-17]} {Mouse: ENSMUSG00000029111, Nelfa, negative elongation factor complex member A, Whsc2, [RH, Score=90.5, Expect=1e-18]} {Dmel: FBgn0038872, Nelf-A, Negative elongation factor A, [RH, Score=79.0, Expect=1e-14]} {Smed: dd_Smed_v6_8484_0_1, dd_Smed_v6_8484_0_1, [RH, Score=57.0, Expect=3e-08]} {RNA1509_7068} {RNA1310_4803.1} {RNA815_2462} |
| 10. | MligTC455_27656 | 14970 | 311.88 | Mlig455_017241 | Neo: Int S/G2/M Age: - |
TUBA1A | 0.95 | - | - | - | - | 0.950 | - | Mlig455_017241 {REF} {Length: 2280} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=230.6]; Tubulin C-terminal domain [PF03953.19, score=177.9]; Tubulin domain [PF14881.8, score=18.7]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=937, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=934, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [RH, Score=927, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [RH, Score=927, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [RH, Score=911, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=891, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=937, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=934, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [RH, Score=927, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [RH, Score=927, Expect=0.0]; ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [RH, Score=919, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=922, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=858, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, dd_Smed_v6_10947_0_2, [RH, Score=934, Expect=0.0]} {RNA1509_13953, RNA1509_14976, RNA1509_37193, RNA1509_43271, RNA1509_49156, RNA1509_8064, RNA1509_8722} {RNA1310_10339.1, RNA1509_13953, RNA1509_14976, RNA1509_37193, RNA1509_49156, RNA1509_8064, RNA1509_8722} {RNA1509_13953, RNA1509_14976, RNA1509_37193, RNA1509_49156, RNA1509_8064, RNA1509_8722, RNA815_1715.2} |
Berezikov Lab - 2020-2021 © ERIBA