M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_33089

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33089 33 0.69 Mlig455_016570

Neo: -

Age: -

 Mlig455_016570 {REF} {Length: 1723} {RNA1509_27637} {RNA1310_33309} {RNA815_11183}

Cumulative graph for MligTC455_33089

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.046 0.924 0.99984 1.00000
RegionR2 2.741 0.924 0.99988 1.00000
RegionR3 1.156 0.924 0.99996 1.00000
RegionR4 -1.889 0.924 0.99981 1.00000
RegionR5 0.365 0.924 0.99998 1.00000
RegionR6 1.031 0.924 0.99995 1.00000
RegionR7 0.773 0.924 0.99994 1.00000
RegionR8 -0.131 0.924 0.99999 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.988 0.924 0.99996 1.00000
RegenerationR2 3.764 0.924 0.00936 0.15483
RegenerationR3 4.157 0.924 0.03317 0.32471
RegenerationR4 5.032 0.924 0.00364 0.08196
RegenerationR5 3.965 0.924 0.01055 0.18145
RegenerationR6 4.307 0.924 0.02647 0.20393
RegenerationBL 4.559 0.924 0.03797 0.22082
RegenerationTP 4.733 0.924 0.07971 0.44986


Genes with expression patterns similar to MligTC455_33089

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33089 33 0.69 Mlig455_016570

Neo: -

Age: -

 2 - - - - 1.000 1.000 Mlig455_016570 {REF} {Length: 1723} {RNA1509_27637} {RNA1310_33309} {RNA815_11183}
2. MligTC455_28109 38 0.78 Mlig455_054629

Neo: -

Age: -

 0.985 - - - - - 0.985 Mlig455_054629 {REF} {Length: 863} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_76536} {RNA815_52485}
3. MligTC455_46970 116 2.42 Mlig455_023542, Mlig455_023648

Neo: -

Age: Up-Down-Down

 0.979 - - - - - 0.979

Mlig455_023542 {REF} {Length: 204} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51411} {RNA1310_6238} {RNA815_21168}

Mlig455_023648 {REF} {Length: 217} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51411} {RNA1310_6238} {RNA815_21168}
4. MligTC455_10086 82 1.7 Mlig455_024870

Neo: -

Age: logFC(26M/2M)=0.239

 0.975 - - - - - 0.975 Mlig455_024870 {REF} {Length: 2906} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5054) [PF16477.7, score=80.4]} {Smed: dd_Smed_v6_540_0_1, dd_Smed_v6_540_0_1, [RH, Score=494, Expect=3e-164]} {RNA1509_50537} {RNA1310_4754} {RNA815_1397.1}
5. MligTC455_08228 24 0.5 Mlig455_062086

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_062086 {REF} {Length: 3232} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=122.1]} {Dmel: FBgn0039675, ppk21, pickpocket 21, [RH, Score=52.0, Expect=1e-06]} {Smed: dd_Smed_v6_30612_0_1, dd_Smed_v6_30612_0_1, [Score=56.2, Expect=3e-08]} {RNA1509_24895} {RNA1310_32096} {RNA815_14146.1}
6. MligTC455_45864 149 3.1 Mlig455_041438

Neo: Int S/G2/M

Age: Down-Up-Up

 0.972 - - - - - 0.972 Mlig455_041438 {REF} {Length: 4261} {RNA1509_59330} {RNA1310_2367} {RNA815_1531}
7. MligTC455_23879 9 0.19 Mlig455_043103

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_043103 {REF} {Length: 267} {NoTransDecoderORF} {RNA1310_94018} {RNA815_57343}
8. MligTC455_13028 20 0.41 Mlig455_004716

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_004716 {REF} {Length: 656} {NoTransDecoderORF}
9. MligTC455_41081 56 1.17 Mlig455_064084

Neo: Int S/G2/M

Age: Up-Down-Down

 KIF20A 0.963 - - - - - 0.963 Mlig455_064084 {REF} {Length: 7806} {Pfam: Kinesin motor domain [PF00225.25, score=289.0]; Microtubule binding [PF16796.7, score=46.0]} {Human: ENSG00000112984, KIF20A, kinesin family member 20A, [RH, Score=308, Expect=2e-87]; ENSG00000138182, KIF20B, kinesin family member 20B, [RH, Score=304, Expect=1e-82]} {Mouse: ENSMUSG00000024795, Kif20b, kinesin family member 20B, [RH, Score=307, Expect=5e-84]; ENSMUSG00000003779, Kif20a, kinesin family member 20A, [RH, Score=306, Expect=1e-86]} {Dmel: FBgn0011692, pav, pavarotti, [Score=201, Expect=2e-52]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [RH, Score=281, Expect=7e-78]} {RNA1509_17742} {RNA1310_1227.1} {RNA815_3788}
10. MligTC455_08198 26 0.55 Mlig455_045449

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_045449 {REF} {Length: 411} {RNA1310_123580} {RNA815_47103}
11. MligTC455_09509 46 0.95 Mlig455_042043

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_042043 {REF} {Length: 1543} {Pfam: SICA C-terminal inner membrane domain [PF12879.9, score=63.2]} {RNA1509_50446} {RNA1310_8738.1} {RNA815_21682.1}
12. MligTC455_03471 12 0.26 Mlig455_070596

Neo: -

Age: logFC(26M/2M)=1.720

 0.96 - - - - - 0.960 Mlig455_070596 {REF} {Length: 4597} {RNA1509_21785} {RNA1310_51419} {RNA815_4932.1}
13. MligTC455_51285 53 1.1 Mlig455_036196

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_036196 {REF} {Length: 840} {NoTransDecoderORF} {RNA1310_62519}
14. MligTC455_08709 35 0.72 Mlig455_057110

Neo: -

Age: -

 PCDHA13 0.959 - - - - - 0.959 Mlig455_057110 {REF} {Length: 4248} {Pfam: Cadherin domain [PF00028.19, score=213.8]; Cadherin-like [PF16184.7, score=23.5]} {Human: ENSG00000239389, PCDHA13, protocadherin alpha 13, [Score=221, Expect=6e-59]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=217, Expect=1e-56]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=216, Expect=1e-56]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=214, Expect=7e-56]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=204, Expect=3e-53]} {Dmel: FBgn0001075, ft, fat, [Score=152, Expect=1e-36]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=107, Expect=3e-23]} {Smed: dd_Smed_v6_13040_0_1, dd_Smed_v6_13040_0_1, [Score=301, Expect=6e-86]} {RNA1509_59255} {RNA1310_30001} {RNA815_31666}
15. MligTC455_24578 43 0.89 Mlig455_008110

Neo: -

Age: Up-Down-Down

Region-enriched R2: 5.140/0.00102

 NR1I2 0.959 - - - - - 0.959 Mlig455_008110 {REF} {Length: 8644} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=70.7]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=86.7, Expect=2e-17]; ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=82.4, Expect=4e-16]; ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=82.4, Expect=1e-16]} {Mouse: ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=87.4, Expect=6e-18]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=84.3, Expect=1e-16]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=86.7, Expect=2e-17]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=102, Expect=6e-23]} {RNA1509_57652} {RNA1310_76616} {RNA815_39680}
16. MligTC455_34907 179 3.73 Mlig455_044103

Neo: -

Age: logFC(26M/2M)=0.902

 SLC22A15 0.959 - - - - - 0.959 Mlig455_044103 {REF} {Length: 2798} {Pfam: Sugar (and other) transporter [PF00083.26, score=91.9]; Major Facilitator Superfamily [PF07690.18, score=46.0]} {Human: ENSG00000163393, SLC22A15, solute carrier family 22 member 15, [Score=95.5, Expect=2e-21]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=94.7, Expect=5e-21]} {Mouse: ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=98.6, Expect=1e-22]} {Dmel: FBgn0086365, Orct2, Organic cation transporter 2, [Score=123, Expect=2e-31]} {Celegans: WBGene00003843, oct-2, Organic Cation Transporter; Organic cation transporter, [Score=97.4, Expect=3e-22]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=133, Expect=2e-35]} {RNA1509_47816} {RNA1310_3637.2, RNA1509_47816} {RNA1509_47816, RNA815_23449}
17. MligTC455_44281 456 9.5 Mlig455_068996

Neo: -

Age: -

 ANPEP 0.959 - - - - - 0.959 Mlig455_068996 {REF} {Length: 3001} {Pfam: Peptidase family M1 domain [PF01433.22, score=209.7]; ERAP1-like C-terminal domain [PF11838.10, score=183.2]; Peptidase M1 N-terminal domain [PF17900.3, score=52.5]} {Human: ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [Score=234, Expect=6e-66]; ENSG00000141279, NPEPPS, aminopeptidase puromycin sensitive, [Score=232, Expect=2e-65]; ENSG00000138792, ENPEP, glutamyl aminopeptidase, [Score=229, Expect=2e-64]; ENSG00000164308, ERAP2, endoplasmic reticulum aminopeptidase 2, [Score=228, Expect=9e-64]; ENSG00000164307, ERAP1, endoplasmic reticulum aminopeptidase 1, [Score=227, Expect=2e-63]} {Mouse: ENSMUSG00000001441, Npepps, aminopeptidase puromycin sensitive, [Score=232, Expect=4e-67]; ENSMUSG00000023845, Lnpep, leucyl/cystinyl aminopeptidase, [Score=226, Expect=5e-63]; ENSMUSG00000028024, Enpep, glutamyl aminopeptidase, [Score=226, Expect=2e-66]; ENSMUSG00000021583, Erap1, endoplasmic reticulum aminopeptidase 1, [Score=224, Expect=1e-62]; ENSMUSG00000039062, Anpep, alanyl (membrane) aminopeptidase, [Score=223, Expect=3e-62]} {Dmel: FBgn0039656, CG11951, [Score=283, Expect=1e-84]} {Celegans: WBGene00011587, T07F10.1, Aminopeptidase, [Score=215, Expect=1e-59]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [Score=256, Expect=5e-74]} {RNA1509_48214, RNA1509_6569} {RNA1310_3710.1, RNA1509_48214} {RNA1509_48214, RNA815_5591.1}
18. MligTC455_25213 78 1.63 Mlig455_025712, Mlig455_025734, Mlig455_064431

Neo: -

Age: -

 0.958 - - - - - 0.958

Mlig455_025712 {REF} {Length: 840} {NoTransDecoderORF} {RNA1509_49205} {RNA1310_16163} {RNA815_51467}

Mlig455_025734 {REF} {Length: 1579} {NoTransDecoderORF} {RNA1509_49205} {RNA1310_16163, RNA1509_49205} {RNA1509_49205, RNA815_51467}

Mlig455_064431 {REF} {Length: 946} {NoTransDecoderORF} {RNA1509_49205} {RNA1310_16163} {RNA815_51467}
19. MligTC455_32033 79 1.65 Mlig455_050881

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.558

 MAPK14 0.958 - - - - - 0.958 Mlig455_050881 {REF} {Length: 2379} {Pfam: Protein kinase domain [PF00069.27, score=60.5]} {Human: ENSG00000112062, MAPK14, mitogen-activated protein kinase 14, [Score=92.4, Expect=1e-21]; ENSG00000050748, MAPK9, mitogen-activated protein kinase 9, [Score=91.3, Expect=3e-21]; ENSG00000156711, MAPK13, mitogen-activated protein kinase 13, [Score=88.2, Expect=4e-20]} {Mouse: ENSMUSG00000053436, Mapk14, mitogen-activated protein kinase 14, [Score=92.0, Expect=1e-21]; ENSMUSG00000020366, Mapk9, mitogen-activated protein kinase 9, [Score=91.3, Expect=2e-21]} {Dmel: FBgn0024846, p38b, p38b MAP kinase, [Score=90.5, Expect=3e-21]} {Celegans: WBGene00004055, pmk-1, Mitogen-activated protein kinase pmk-1, [Score=86.3, Expect=6e-20]} {Smed: dd_Smed_v6_6042_0_1, dd_Smed_v6_6042_0_1, [Score=87.8, Expect=1e-20]} {RNA1509_37050} {RNA1310_4000} {RNA815_17615}
20. MligTC455_48591 25 0.53 Mlig455_047514, Mlig455_059649

Neo: -

Age: -

 NEUROD1 0.958 - - - - - 0.958

Mlig455_047514 {REF} {Length: 1271} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=54.8]; Neuronal helix-loop-helix transcription factor [PF12533.10, score=51.0]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [Score=140, Expect=1e-38]; ENSG00000164600, NEUROD6, neuronal differentiation 6, [Score=136, Expect=1e-37]} {Mouse: ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [Score=139, Expect=1e-38]; ENSMUSG00000037984, Neurod6, neurogenic differentiation 6, [Score=133, Expect=1e-36]} {Dmel: FBgn0010433, ato, atonal, [Score=82.0, Expect=8e-18]} {Celegans: WBGene00000561, cnd-1, Neurogenic differentiation factor 1, [Score=127, Expect=6e-36]} {Smed: dd_Smed_v6_21717_0_1, dd_Smed_v6_21717_0_1, [RH, Score=136, Expect=2e-39]} {RNA1310_133631} {RNA815_38093}

Mlig455_059649 {REF} {Length: 945} {Pfam: Neuronal helix-loop-helix transcription factor [PF12533.10, score=20.2]} {RNA1310_133631} {RNA815_38093}
21. MligTC455_53149 35 0.73 Mlig455_028208

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_028208 {REF} {Length: 2344} {RNA1509_40765} {RNA1310_47463} {RNA815_27999}
22. MligTC455_08950 66 1.36 Mlig455_022153

Neo: Irradiation

Age: -

Region-enriched R4: 3.044/0.01029

 PIAS1 0.957 - - - - - 0.957 Mlig455_022153 {REF} {Length: 5642} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=140.0]; PINIT domain [PF14324.8, score=111.6]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=49.9]; Family of unknown function (DUF6510) [PF20120.1, score=18.4]} {Human: ENSG00000033800, PIAS1, protein inhibitor of activated STAT 1, [Score=182, Expect=2e-47]; ENSG00000131788, PIAS3, protein inhibitor of activated STAT 3, [Score=180, Expect=1e-46]; ENSG00000078043, PIAS2, protein inhibitor of activated STAT 2, [Score=175, Expect=2e-45]; ENSG00000105229, PIAS4, protein inhibitor of activated STAT 4, [Score=174, Expect=1e-45]} {Mouse: ENSMUSG00000032405, Pias1, protein inhibitor of activated STAT 1, [Score=180, Expect=1e-46]; ENSMUSG00000028101, Pias3, protein inhibitor of activated STAT 3, [Score=178, Expect=7e-48]; ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [Score=177, Expect=3e-46]; ENSMUSG00000004934, Pias4, protein inhibitor of activated STAT 4, [Score=171, Expect=1e-44]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [Score=185, Expect=2e-49]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=138, Expect=2e-33]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [Score=122, Expect=5e-28]} {RNA1509_12922} {RNA1310_4338.1} {RNA815_951.1}
23. MligTC455_29697 30 0.62 Mlig455_061221

Neo: -

Age: -

 ANKRD28 0.957 - - - - - 0.957 Mlig455_061221 {REF} {Length: 6142} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=96.9]; Ankyrin repeats (many copies) [PF13637.8, score=73.2]; Ankyrin repeat [PF13606.8, score=60.5]; Ankyrin repeat [PF00023.32, score=48.5]; Ankyrin repeats (many copies) [PF13857.8, score=47.6]; Mab-21 protein [PF03281.16, score=38.6]; Transcription factor BRX N-terminal domain [PF13713.8, score=20.4]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=85.5, Expect=4e-16]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=84.0, Expect=1e-15]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=83.2, Expect=2e-15]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=78.2, Expect=5e-14]} {Celegans: WBGene00012124, T28D6.4, [Score=80.1, Expect=7e-15]} {Smed: dd_Smed_v6_11663_0_4, dd_Smed_v6_11663_0_4, [Score=69.3, Expect=1e-11]} {RNA1509_27730} {RNA1310_4721, RNA1509_27730} {RNA1509_27730, RNA815_2426.1}
24. MligTC455_38019 32 0.66 Mlig455_052061

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_052061 {REF} {Length: 1614} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_86084} {RNA815_47119}
25. MligTC455_11171 38 0.79 Mlig455_032767

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_032767 {REF} {Length: 428} {TRANSSPLICED}
26. MligTC455_44421 36 0.74 Mlig455_016824

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_016824 {REF} {Length: 717} {NoTransDecoderORF} {RNA1310_130476}
27. MligTC455_45116 160 3.34 Mlig455_013593

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.671/0.00707

 ZNF277 0.956 - - - - - 0.956 Mlig455_013593 {REF} {Length: 2093} {TRANSSPLICED} {Pfam: C2H2 type zinc-finger (2 copies) [PF12756.9, score=87.5]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=28.3]} {Human: ENSG00000198839, ZNF277, zinc finger protein 277, [RH, Score=124, Expect=5e-32]} {Mouse: ENSMUSG00000055917, Zfp277, zinc finger protein 277, [RH, Score=118, Expect=8e-29]} {Dmel: FBgn0034814, CG9890, [RH, Score=130, Expect=3e-33]} {Celegans: WBGene00009772, ztf-7, Zinc finger putative Transcription Factor family, [RH, Score=116, Expect=8e-28]} {RNA1509_8883} {RNA1310_20393} {RNA815_9523}
28. MligTC455_16142 67 1.41 Mlig455_028937

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_028937 {REF} {Length: 2115} {NoTransDecoderORF} {RNA1509_53775} {RNA1310_26215.1, RNA1509_53775} {RNA1509_53775, RNA815_54266}
29. MligTC455_14415 9 0.19 Mlig455_023656

Neo: -

Age: Up-Down-Up

 0.954 - - - - - 0.954 Mlig455_023656 {REF} {Length: 3924} {Pfam: Formin Homology 2 Domain [PF02181.25, score=75.5]; Diaphanous FH3 Domain [PF06367.18, score=34.1]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=25.4]} {Mouse: ENSMUSG00000034574, Daam1, dishevelled associated activator of morphogenesis 1, [Score=72.8, Expect=2e-12]} {Dmel: FBgn0025641, DAAM, Dishevelled Associated Activator of Morphogenesis, [Score=67.4, Expect=7e-11]} {RNA1509_37113} {RNA1310_16323.1, RNA1509_37113} {RNA1509_37113, RNA815_7242.1}
30. MligTC455_18987 99 2.07 Mlig455_049864

Neo: -

Age: Down-Up-Down

 SYN1 0.954 - - - - - 0.954 Mlig455_049864 {REF} {Length: 2522} {Pfam: Synapsin, ATP binding domain [PF02750.16, score=235.1]; Synapsin, N-terminal domain [PF02078.18, score=137.6]} {Human: ENSG00000008056, SYN1, synapsin I, [RH, Score=323, Expect=4e-102]; ENSG00000185666, SYN3, synapsin III, [RH, Score=322, Expect=1e-102]; ENSG00000157152, SYN2, synapsin II, [RH, Score=322, Expect=1e-102]} {Mouse: ENSMUSG00000059602, Syn3, synapsin III, [RH, Score=328, Expect=4e-105]; ENSMUSG00000037217, Syn1, synapsin I, [RH, Score=325, Expect=6e-103]; ENSMUSG00000009394, Syn2, synapsin II, [RH, Score=322, Expect=4e-104]} {Dmel: FBgn0004575, Syn, Synapsin, [RH, Score=322, Expect=1e-98]} {Celegans: WBGene00004913, snn-1, SyNapsiN; Synapsin, [Score=164, Expect=2e-44]} {Smed: dd_Smed_v6_3135_0_1, dd_Smed_v6_3135_0_1, [RH, Score=390, Expect=4e-129]} {RNA1509_58931} {RNA1310_22468.1} {RNA815_2386}
31. MligTC455_06741 156 3.25 Mlig455_001405, Mlig455_056658, Mlig455_064262, Mlig455_070036

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_001405 {REF} {Length: 203} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}

Mlig455_056658 {REF} {Length: 355} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}

Mlig455_064262 {REF} {Length: 202} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}

Mlig455_070036 {REF} {Length: 244} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}
32. MligTC455_34066 149 3.1 Mlig455_069292

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_069292 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_20753} {RNA1310_16791} {RNA815_12674.1}
33. MligTC455_44993 102 2.13 Mlig455_068082

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.499

Region-enriched R4: 3.035/0.03492

 MEN1 0.953 - - - - - 0.953 Mlig455_068082 {REF} {Length: 4679} {TRANSSPLICED} {Pfam: Menin [PF05053.15, score=359.0]} {Human: ENSG00000133895, MEN1, menin 1, [RH, Score=259, Expect=6e-77]} {Mouse: ENSMUSG00000024947, Men1, multiple endocrine neoplasia 1, [RH, Score=258, Expect=2e-76]; ENSMUSG00000106695, Men1, multiple endocrine neoplasia 1, [RH, Score=258, Expect=2e-76]} {Dmel: FBgn0031885, Mnn1, Menin 1, [RH, Score=219, Expect=4e-61]} {Smed: dd_Smed_v6_11544_0_1, dd_Smed_v6_11544_0_1, [RH, Score=206, Expect=2e-56]} {RNA1509_25186} {RNA1310_10581.1} {RNA815_3602}
34. MligTC455_54026 99 2.07 Mlig455_025843, Mlig455_025903

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_025843 {REF} {Length: 2505} {TRANSSPLICED} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.5]; HSP20-like domain found in ArsA [PF17886.3, score=30.3]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.8, Expect=8e-10]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=60.5, Expect=2e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=101, Expect=2e-25]} {RNA1509_26837} {RNA1310_48105} {RNA815_21766}

Mlig455_025903 {REF} {Length: 2459} {TRANSSPLICED} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.5]; HSP20-like domain found in ArsA [PF17886.3, score=30.3]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.8, Expect=8e-10]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=60.8, Expect=2e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=101, Expect=2e-25]} {RNA1509_33990} {RNA1310_42388.1} {RNA815_21766}
35. MligTC455_06578 32 0.67 Mlig455_026520, Mlig455_026620

Neo: -

Age: -

 0.952 - - - - - 0.952

Mlig455_026520 {REF} {Length: 631} {NoTransDecoderORF}

Mlig455_026620 {REF} {Length: 2186} {RNA1509_4420} {RNA1310_2560} {RNA815_2113.1}
36. MligTC455_20633 19 0.39 Mlig455_022835

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_022835 {REF} {Length: 3042} {RNA1509_40399} {RNA1310_59481} {RNA815_5572.1}
37. MligTC455_29365 117 2.43 Mlig455_056795

Neo: -

Age: Up-Down-Down

 0.952 - - - - - 0.952 Mlig455_056795 {REF} {Length: 1826} {RNA1509_16318} {RNA1310_36885.1} {RNA815_17277}
38. MligTC455_23606 40 0.83 Mlig455_045820

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.429

 ANK2 0.951 - - - - - 0.951 Mlig455_045820 {REF} {Length: 6904} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=588.6]; Ankyrin repeats (many copies) [PF13637.8, score=559.7]; Ankyrin repeat [PF13606.8, score=378.6]; Ankyrin repeats (many copies) [PF13857.8, score=364.4]; Ankyrin repeat [PF00023.32, score=287.1]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=234, Expect=4e-61]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=234, Expect=4e-62]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=208, Expect=1e-53]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=187, Expect=7e-48]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=234, Expect=2e-63]} {RNA1509_19596} {RNA1310_2241.1} {RNA815_5124}
39. MligTC455_07771 25 0.53 Mlig455_003398

Neo: -

Age: Up-Down-Up

Region-enriched R2: 7.012/0.01381

 0.95 - - - - - 0.950 Mlig455_003398 {REF} {Length: 1701} {RNA1509_48780} {RNA1310_65644.1} {RNA815_18118.2}
40. MligTC455_19119 48 0.99 Mlig455_060984

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_060984 {REF} {Length: 533} {NoTransDecoderORF} {RNA1509_52549}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA