Data search
Results for MligTC455_33139
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33139 | 40 | 0.83 | Mlig455_067886 | Neo: Int S/G2/M Age: - |
Mlig455_067886 {REF} {Length: 4280} {TRANSSPLICED} {RNA1509_29764} {RNA1310_1953.2} {RNA815_1322} |
Cumulative graph for MligTC455_33139
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.933 | 0.969 | 0.99955 | 1.00000 | |
| RegionR2 | 4.978 | 0.969 | 0.01645 | 0.13614 | |
| RegionR3 | 3.52 | 0.969 | 0.03860 | 0.34184 | |
| RegionR4 | -2.575 | 0.969 | 0.99908 | 1.00000 | |
| RegionR5 | 2.994 | 0.969 | 0.08199 | 0.26665 | |
| RegionR6 | 2.46 | 0.969 | 0.09723 | 0.57313 | |
| RegionR7 | -1.761 | 0.969 | 0.99985 | 1.00000 | |
| RegionR8 | -2.683 | 0.969 | 0.99978 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.227 | 0.969 | 0.99997 | 1.00000 | |
| RegenerationR2 | -4.487 | 0.969 | 0.04555 | 0.35277 | |
| RegenerationR3 | -3.845 | 0.969 | 0.13780 | 0.56343 | |
| RegenerationR4 | 1.061 | 0.969 | 0.38898 | 0.80673 | |
| RegenerationR5 | -2.762 | 0.969 | 0.32428 | 0.74693 | |
| RegenerationR6 | -3.365 | 0.969 | 0.23903 | 0.58657 | |
| RegenerationBL | 3.043 | 0.969 | 0.17113 | 0.49604 | |
| RegenerationTP | 0.386 | 0.969 | 0.99995 | 1.00000 |
Genes with expression patterns similar to MligTC455_33139
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33139 | 40 | 0.83 | Mlig455_067886 | Neo: Int S/G2/M Age: - |
3 | - | 1.000 | 1.000 | - | 1.000 | - | Mlig455_067886 {REF} {Length: 4280} {TRANSSPLICED} {RNA1509_29764} {RNA1310_1953.2} {RNA815_1322} | |
| 2. | MligTC455_21222 | 221 | 4.6 | Mlig455_038486, Mlig455_046701, Mlig455_052136, Mlig455_055634 | Neo: - Age: - Region-enriched R1: 7.823/0.00076 |
0.984 | - | - | - | - | 0.984 | - | Mlig455_038486 {REF} {Length: 1089} {RNA1509_55040} {RNA1310_81175} {RNA815_45657} Mlig455_046701 {REF} {Length: 758} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_81175} {RNA815_45657} Mlig455_052136 {REF} {Length: 296} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_48584} {RNA815_45657} Mlig455_055634 {REF} {Length: 254} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_81175} {RNA815_45657} |
|
| 3. | MligTC455_26110 | 35 | 0.72 | Mlig455_009326 | Neo: - Age: - Regeneration-upregulated BL: 7.026 Regeneration-enriched BL: 7.026 |
0.966 | - | - | - | - | 0.966 | - | Mlig455_009326 {REF} {Length: 2377} {RNA1509_41127} {RNA1310_28088} {RNA815_5881.1} | |
| 4. | MligTC455_26755 | 93 | 1.93 | Mlig455_022157 | Neo: - Age: Down-Down-Up |
NELFB | 0.966 | - | - | 0.966 | - | - | - | Mlig455_022157 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Cofactor of BRCA1 (COBRA1) [PF06209.15, score=174.9]} {Human: ENSG00000188986, NELFB, negative elongation factor complex member B, [RH, Score=204, Expect=1e-56]} {Mouse: ENSMUSG00000013465, Nelfb, negative elongation factor complex member B, [RH, Score=209, Expect=4e-58]} {Dmel: FBgn0027553, NELF-B, [RH, Score=199, Expect=4e-55]} {Smed: dd_Smed_v6_9755_0_1, dd_Smed_v6_9755_0_1, [RH, Score=87.0, Expect=1e-17]} {RNA1509_30045} {RNA1310_13572, RNA1509_30045} {RNA1509_30045, RNA815_13418} |
| 5. | MligTC455_34975 | 15 | 0.32 | Mlig455_037835 | Neo: - Age: - |
EPN2 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_037835 {REF} {Length: 3089} {TRANSSPLICED} {Pfam: ENTH domain [PF01417.22, score=158.4]; ANTH domain [PF07651.18, score=28.2]; VHS domain [PF00790.21, score=23.9]} {Human: ENSG00000072134, EPN2, epsin 2, [Score=307, Expect=2e-96]; ENSG00000063245, EPN1, epsin 1, [Score=303, Expect=8e-95]} {Mouse: ENSMUSG00000035203, Epn1, epsin 1, [Score=310, Expect=2e-97]} {Dmel: FBgn0028582, lqf, liquid facets, [RH, Score=282, Expect=7e-85]} {Celegans: WBGene00001329, epn-1, EPsiN (Endocytic protein) homolog, [Score=264, Expect=1e-81]} {Smed: dd_Smed_v6_4779_0_2, dd_Smed_v6_4779_0_2, [RH, Score=290, Expect=4e-90]} {RNA1509_10151} {RNA1310_15538} {RNA815_13911} |
Berezikov Lab - 2020-2021 © ERIBA