TomoSeq data search

Data search

Results for MligTC455_33144

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33144	783	16.31	Mlig455_040574, Mlig455_062061	Neo: - Age: -	NPHS1	Mlig455_040574 {REF} {Length: 5022} {Pfam: Immunoglobulin domain [PF13927.8, score=126.2]; Immunoglobulin I-set domain [PF07679.18, score=88.5]; Immunoglobulin domain [PF13895.8, score=72.1]; Immunoglobulin domain [PF00047.27, score=64.1]; Immunoglobulin V-set domain [PF07686.19, score=41.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=28.1]; Fibronectin type III domain [PF00041.23, score=19.1]} {Human: ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=75.5, Expect=5e-13]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=84.3, Expect=6e-16]} {Dmel: FBgn0029082, hbs, hibris, [Score=127, Expect=3e-29]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_16056_0_1, dd_Smed_v6_16056_0_1, [Score=76.3, Expect=1e-13]} {RNA1509_15216, RNA1509_51822} {RNA1310_1630, RNA1509_15216, RNA1509_51822} {RNA1509_15216, RNA1509_51822, RNA815_12733} Mlig455_062061 {REF} {Length: 4681} {Pfam: Immunoglobulin domain [PF13927.8, score=123.1]; Immunoglobulin I-set domain [PF07679.18, score=84.0]; Immunoglobulin domain [PF13895.8, score=74.6]; Immunoglobulin domain [PF00047.27, score=54.4]; Immunoglobulin V-set domain [PF07686.19, score=30.5]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.4]} {Human: ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=82.8, Expect=2e-15]} {Dmel: FBgn0029082, hbs, hibris, [Score=128, Expect=2e-29]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=62.8, Expect=2e-09]} {Smed: dd_Smed_v6_16056_0_1, dd_Smed_v6_16056_0_1, [Score=76.3, Expect=1e-13]} {RNA1509_15216} {RNA1310_1630} {RNA815_12733}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33144

783

16.31

Mlig455_040574, Mlig455_062061

Neo: -

Age: -

NPHS1

Mlig455_040574 {REF} {Length: 5022} {Pfam: Immunoglobulin domain [PF13927.8, score=126.2]; Immunoglobulin I-set domain [PF07679.18, score=88.5]; Immunoglobulin domain [PF13895.8, score=72.1]; Immunoglobulin domain [PF00047.27, score=64.1]; Immunoglobulin V-set domain [PF07686.19, score=41.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=28.1]; Fibronectin type III domain [PF00041.23, score=19.1]} {Human: ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=75.5, Expect=5e-13]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=84.3, Expect=6e-16]} {Dmel: FBgn0029082, hbs, hibris, [Score=127, Expect=3e-29]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_16056_0_1, dd_Smed_v6_16056_0_1, [Score=76.3, Expect=1e-13]} {RNA1509_15216, RNA1509_51822} {RNA1310_1630, RNA1509_15216, RNA1509_51822} {RNA1509_15216, RNA1509_51822, RNA815_12733}

Mlig455_062061 {REF} {Length: 4681} {Pfam: Immunoglobulin domain [PF13927.8, score=123.1]; Immunoglobulin I-set domain [PF07679.18, score=84.0]; Immunoglobulin domain [PF13895.8, score=74.6]; Immunoglobulin domain [PF00047.27, score=54.4]; Immunoglobulin V-set domain [PF07686.19, score=30.5]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.4]} {Human: ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=82.8, Expect=2e-15]} {Dmel: FBgn0029082, hbs, hibris, [Score=128, Expect=2e-29]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=62.8, Expect=2e-09]} {Smed: dd_Smed_v6_16056_0_1, dd_Smed_v6_16056_0_1, [Score=76.3, Expect=1e-13]} {RNA1509_15216} {RNA1310_1630} {RNA815_12733}

Cumulative graph for MligTC455_33144

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.158	4.239	0.90769	1.00000
RegionR2	0.278	4.239	0.62630	0.96837
RegionR3	-0.266	4.239	0.57874	1.00000
RegionR4	0.068	4.239	0.90810	1.00000
RegionR5	-0.79	4.239	0.09516	0.29516
RegionR6	-0.112	4.239	0.81216	1.00000
RegionR7	0.036	4.239	0.94836	1.00000
RegionR8	0.944	4.239	0.10975	0.61600

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.017	4.239	0.16250	0.90413
RegenerationR2	0.399	4.239	0.42068	0.82781
RegenerationR3	0.037	4.239	0.94803	1.00000
RegenerationR4	-0.744	4.239	0.22234	0.67097
RegenerationR5	0.81	4.239	0.14245	0.55650
RegenerationR6	0.089	4.239	0.87217	1.00000
RegenerationBL	-1.623	4.239	0.02863	0.18809
RegenerationTP	-1.144	4.239	0.08279	0.45649

Genes with expression patterns similar to MligTC455_33144

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33144	783	16.31	Mlig455_040574, Mlig455_062061	Neo: - Age: -	NPHS1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040574 {REF} {Length: 5022} {Pfam: Immunoglobulin domain [PF13927.8, score=126.2]; Immunoglobulin I-set domain [PF07679.18, score=88.5]; Immunoglobulin domain [PF13895.8, score=72.1]; Immunoglobulin domain [PF00047.27, score=64.1]; Immunoglobulin V-set domain [PF07686.19, score=41.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=28.1]; Fibronectin type III domain [PF00041.23, score=19.1]} {Human: ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=75.5, Expect=5e-13]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=84.3, Expect=6e-16]} {Dmel: FBgn0029082, hbs, hibris, [Score=127, Expect=3e-29]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_16056_0_1, dd_Smed_v6_16056_0_1, [Score=76.3, Expect=1e-13]} {RNA1509_15216, RNA1509_51822} {RNA1310_1630, RNA1509_15216, RNA1509_51822} {RNA1509_15216, RNA1509_51822, RNA815_12733} Mlig455_062061 {REF} {Length: 4681} {Pfam: Immunoglobulin domain [PF13927.8, score=123.1]; Immunoglobulin I-set domain [PF07679.18, score=84.0]; Immunoglobulin domain [PF13895.8, score=74.6]; Immunoglobulin domain [PF00047.27, score=54.4]; Immunoglobulin V-set domain [PF07686.19, score=30.5]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.4]} {Human: ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=82.8, Expect=2e-15]} {Dmel: FBgn0029082, hbs, hibris, [Score=128, Expect=2e-29]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=62.8, Expect=2e-09]} {Smed: dd_Smed_v6_16056_0_1, dd_Smed_v6_16056_0_1, [Score=76.3, Expect=1e-13]} {RNA1509_15216} {RNA1310_1630} {RNA815_12733}
2.	MligTC455_45026	2671	55.65	Mlig455_023250	Neo: - Age: - Region-specific R7: 4.116 Region-enriched R7: 3.367/0.00000	CFAP161	1.676	-	-	-	-	0.955	0.721	Mlig455_023250 {REF} {Length: 1575} {TRANSSPLICED} {Human: ENSG00000156206, CFAP161, cilia and flagella associated protein 161, [RH, Score=162, Expect=1e-47]} {Mouse: ENSMUSG00000011154, Cfap161, cilia and flagella associated protein 161, [RH, Score=174, Expect=2e-52]} {Dmel: FBgn0085486, CG34457, [RH, Score=110, Expect=5e-28]} {Smed: dd_Smed_v6_8229_0_1, dd_Smed_v6_8229_0_1, [RH, Score=227, Expect=3e-73]} {RNA1509_5241, RNA1509_55466} {RNA1310_22539.1, RNA1509_5241, RNA1509_55466} {RNA1509_5241, RNA1509_55466, RNA815_9025}
3.	MligTC455_51398	351	7.32	Mlig455_000583	Neo: - Age: -	KCNT1	0.956	-	0.956	-	-	-	-	Mlig455_000583 {REF} {Length: 4688} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=91.5]; Ion channel [PF07885.18, score=43.5]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [RH, Score=1147, Expect=0.0]; ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [RH, Score=1132, Expect=0.0]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [RH, Score=1132, Expect=0.0]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [RH, Score=848, Expect=0.0]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [RH, Score=1364, Expect=0.0]} {RNA1509_10851} {RNA1310_11341} {RNA815_3987}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33144

783

16.31

Mlig455_040574, Mlig455_062061

Neo: -

Age: -

NPHS1

1.000

MligTC455_45026

2671

55.65

Mlig455_023250

Neo: -

Age: -

Region-specific R7: 4.116

Region-enriched R7: 3.367/0.00000

CFAP161

1.676

0.955

0.721

Mlig455_023250 {REF} {Length: 1575} {TRANSSPLICED} {Human: ENSG00000156206, CFAP161, cilia and flagella associated protein 161, [RH, Score=162, Expect=1e-47]} {Mouse: ENSMUSG00000011154, Cfap161, cilia and flagella associated protein 161, [RH, Score=174, Expect=2e-52]} {Dmel: FBgn0085486, CG34457, [RH, Score=110, Expect=5e-28]} {Smed: dd_Smed_v6_8229_0_1, dd_Smed_v6_8229_0_1, [RH, Score=227, Expect=3e-73]} {RNA1509_5241, RNA1509_55466} {RNA1310_22539.1, RNA1509_5241, RNA1509_55466} {RNA1509_5241, RNA1509_55466, RNA815_9025}

MligTC455_51398

351

7.32

Mlig455_000583

Neo: -

Age: -

KCNT1

0.956

Mlig455_000583 {REF} {Length: 4688} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=91.5]; Ion channel [PF07885.18, score=43.5]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [RH, Score=1147, Expect=0.0]; ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [RH, Score=1132, Expect=0.0]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [RH, Score=1132, Expect=0.0]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [RH, Score=848, Expect=0.0]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [RH, Score=1364, Expect=0.0]} {RNA1509_10851} {RNA1310_11341} {RNA815_3987}