TomoSeq data search

Data search

Results for MligTC455_33151

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33151	326	6.80	Mlig455_033894	Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 2.010/0.00939	TDRD1	Mlig455_033894 {REF} {Length: 6910} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=226.9]; Survival motor neuron protein (SMN) [PF06003.14, score=23.5]; B-box zinc finger [PF00643.26, score=21.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.5]; RING-type zinc-finger [PF13445.8, score=18.9]} {Human: ENSG00000095627, TDRD1, tudor domain containing 1, [Score=58.5, Expect=1e-07]} {Mouse: ENSMUSG00000025081, Tdrd1, tudor domain containing 1, [Score=58.2, Expect=1e-07]} {Dmel: FBgn0029807, CG3108, [Score=52.8, Expect=4e-06]} {RNA1509_10557} {RNA1310_643, RNA1509_10557} {RNA1509_10557, RNA815_186}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_33151

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.063	3.312	0.05233	0.53665
RegionR2	1.03	3.312	0.30139	0.69096
RegionR3	1.162	3.312	0.15504	0.66607
RegionR4	0.84	3.312	0.37818	0.70238
RegionR5	2.01	3.312	0.00090	0.00939
RegionR6	0.71	3.312	0.43662	0.99755
RegionR7	-0.398	3.312	0.94297	1.00000
RegionR8	1.71	3.312	0.06049	0.47880

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.087	3.312	0.99988	1.00000
RegenerationR2	0.473	3.312	0.37951	0.80139
RegenerationR3	0.308	3.312	0.61515	0.91491
RegenerationR4	-0.098	3.312	0.88308	1.00000
RegenerationR5	-0.411	3.312	0.45336	0.83251
RegenerationR6	0.932	3.312	0.13381	0.44907
RegenerationBL	-0.017	3.312	0.98495	1.00000
RegenerationTP	-0.668	3.312	0.46445	0.87708

Genes with expression patterns similar to MligTC455_33151

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33151	326	6.8	Mlig455_033894	Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 2.010/0.00939	TDRD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033894 {REF} {Length: 6910} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=226.9]; Survival motor neuron protein (SMN) [PF06003.14, score=23.5]; B-box zinc finger [PF00643.26, score=21.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.5]; RING-type zinc-finger [PF13445.8, score=18.9]} {Human: ENSG00000095627, TDRD1, tudor domain containing 1, [Score=58.5, Expect=1e-07]} {Mouse: ENSMUSG00000025081, Tdrd1, tudor domain containing 1, [Score=58.2, Expect=1e-07]} {Dmel: FBgn0029807, CG3108, [Score=52.8, Expect=4e-06]} {RNA1509_10557} {RNA1310_643, RNA1509_10557} {RNA1509_10557, RNA815_186}
2.	MligTC455_23014	2106	43.88	Mlig455_070258	Neo: - Age: Up-Down-Up Region-enriched R3: 1.656/0.00068 Region-enriched R5: 1.437/0.00067	DMGDH	0.958	-	-	-	-	0.958	-	Mlig455_070258 {REF} {Length: 3375} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=214.5]; FAD dependent oxidoreductase [PF01266.26, score=201.4]; Glycine cleavage T-protein C-terminal barrel domain [PF08669.13, score=63.2]; FAD dependent oxidoreductase central domain [PF16350.7, score=55.7]; FAD binding domain [PF01494.21, score=36.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=28.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=26.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=26.5]; FAD binding domain [PF00890.26, score=23.9]; Thi4 family [PF01946.19, score=20.9]; FAD dependent oxidoreductase [PF12831.9, score=18.9]} {Human: ENSG00000132837, DMGDH, dimethylglycine dehydrogenase, [RH, Score=947, Expect=0.0]} {Mouse: ENSMUSG00000042102, Dmgdh, dimethylglycine dehydrogenase precursor, [RH, Score=951, Expect=0.0]} {Dmel: FBgn0034276, Sardh, Sarcosine dehydrogenase, [Score=321, Expect=6e-96]} {Celegans: WBGene00021355, Y37E3.17, [RH, Score=452, Expect=4e-146]} {Smed: dd_Smed_v6_4377_0_3, dd_Smed_v6_4377_0_3, [RH, Score=924, Expect=0.0]} {RNA1509_5583} {RNA1310_3038.1} {RNA815_868.1}
3.	MligTC455_35361	1420	29.59	Mlig455_008509	Neo: - Age: -	HDHD5	0.955	-	-	-	-	0.955	-	Mlig455_008509 {REF} {Length: 2717} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=51.4]; HAD-hyrolase-like [PF13242.8, score=33.8]} {Human: ENSG00000069998, HDHD5, haloacid dehalogenase like hydrolase domain containing 5, [Score=287, Expect=1e-92]} {Mouse: ENSMUSG00000058979, Hdhd5, haloacid dehalogenase like hydrolase domain containing 5, [RH, Score=274, Expect=8e-88]} {Celegans: WBGene00019255, H32C10.1, [RH, Score=210, Expect=1e-63]} {Smed: dd_Smed_v6_1170_0_1, dd_Smed_v6_1170_0_1, [RH, Score=425, Expect=3e-147]} {RNA1509_48618, RNA1509_9914} {RNA1310_18496, RNA1509_48618, RNA1509_9914} {RNA1509_48618, RNA1509_9914, RNA815_7610}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33151

326

6.8

Mlig455_033894

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R5: 2.010/0.00939

TDRD1

1.000

MligTC455_23014

2106

43.88

Mlig455_070258

Neo: -

Age: Up-Down-Up

Region-enriched R3: 1.656/0.00068
Region-enriched R5: 1.437/0.00067

DMGDH

0.958

Mlig455_070258 {REF} {Length: 3375} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=214.5]; FAD dependent oxidoreductase [PF01266.26, score=201.4]; Glycine cleavage T-protein C-terminal barrel domain [PF08669.13, score=63.2]; FAD dependent oxidoreductase central domain [PF16350.7, score=55.7]; FAD binding domain [PF01494.21, score=36.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=28.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=26.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=26.5]; FAD binding domain [PF00890.26, score=23.9]; Thi4 family [PF01946.19, score=20.9]; FAD dependent oxidoreductase [PF12831.9, score=18.9]} {Human: ENSG00000132837, DMGDH, dimethylglycine dehydrogenase, [RH, Score=947, Expect=0.0]} {Mouse: ENSMUSG00000042102, Dmgdh, dimethylglycine dehydrogenase precursor, [RH, Score=951, Expect=0.0]} {Dmel: FBgn0034276, Sardh, Sarcosine dehydrogenase, [Score=321, Expect=6e-96]} {Celegans: WBGene00021355, Y37E3.17, [RH, Score=452, Expect=4e-146]} {Smed: dd_Smed_v6_4377_0_3, dd_Smed_v6_4377_0_3, [RH, Score=924, Expect=0.0]} {RNA1509_5583} {RNA1310_3038.1} {RNA815_868.1}

MligTC455_35361

1420

29.59

Mlig455_008509

Neo: -

Age: -

HDHD5

0.955

Mlig455_008509 {REF} {Length: 2717} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=51.4]; HAD-hyrolase-like [PF13242.8, score=33.8]} {Human: ENSG00000069998, HDHD5, haloacid dehalogenase like hydrolase domain containing 5, [Score=287, Expect=1e-92]} {Mouse: ENSMUSG00000058979, Hdhd5, haloacid dehalogenase like hydrolase domain containing 5, [RH, Score=274, Expect=8e-88]} {Celegans: WBGene00019255, H32C10.1, [RH, Score=210, Expect=1e-63]} {Smed: dd_Smed_v6_1170_0_1, dd_Smed_v6_1170_0_1, [RH, Score=425, Expect=3e-147]} {RNA1509_48618, RNA1509_9914} {RNA1310_18496, RNA1509_48618, RNA1509_9914} {RNA1509_48618, RNA1509_9914, RNA815_7610}