Data search
Results for MligTC455_33265
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33265 | 10 | 0.21 | Mlig455_033509 | Neo: - Age: Up-Down-Up |
ZFYVE1 | Mlig455_033509 {REF} {Length: 4013} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=90.0]} {Human: ENSG00000165861, ZFYVE1, zinc finger FYVE-type containing 1, [Score=425, Expect=2e-135]} {Mouse: ENSMUSG00000042628, Zfyve1, zinc finger, FYVE domain containing 1, [Score=424, Expect=1e-135]} {Dmel: FBgn0051064, CG31064, [Score=54.7, Expect=3e-07]} {Celegans: WBGene00004101, hgrs-1, Hepatocyte Growth factor-Regulated TK Substrate (HRS) family, [Score=56.2, Expect=9e-08]} {Smed: dd_Smed_v6_7922_0_1, dd_Smed_v6_7922_0_1, [Score=311, Expect=1e-93]} {RNA1509_38385} {RNA1310_5428, RNA1509_38385} {RNA1509_38385, RNA815_3538} |
Cumulative graph for MligTC455_33265
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_33265
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33265 | 10 | 0.21 | Mlig455_033509 | Neo: - Age: Up-Down-Up |
ZFYVE1 | 1 | - | - | - | - | 1.000 | - | Mlig455_033509 {REF} {Length: 4013} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=90.0]} {Human: ENSG00000165861, ZFYVE1, zinc finger FYVE-type containing 1, [Score=425, Expect=2e-135]} {Mouse: ENSMUSG00000042628, Zfyve1, zinc finger, FYVE domain containing 1, [Score=424, Expect=1e-135]} {Dmel: FBgn0051064, CG31064, [Score=54.7, Expect=3e-07]} {Celegans: WBGene00004101, hgrs-1, Hepatocyte Growth factor-Regulated TK Substrate (HRS) family, [Score=56.2, Expect=9e-08]} {Smed: dd_Smed_v6_7922_0_1, dd_Smed_v6_7922_0_1, [Score=311, Expect=1e-93]} {RNA1509_38385} {RNA1310_5428, RNA1509_38385} {RNA1509_38385, RNA815_3538} |
| 2. | MligTC455_34302 | 75 | 1.55 | Mlig455_026985 | Neo: - |
H3F3B | 0.973 | - | - | - | - | 0.973 | - | Mlig455_026985 {REF} {Length: 652} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=172.1]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=22.5]; CENP-S protein [PF15630.8, score=20.3]} {Human: ENSG00000132475, H3F3B, H3 histone family member 3B, [Score=256, Expect=6e-89]; ENSG00000163041, H3F3A, H3 histone family member 3A, [Score=256, Expect=6e-89]; ENSG00000203811, HIST2H3C, histone cluster 2 H3 family member c, [Score=253, Expect=1e-87]; ENSG00000183598, HIST2H3D, histone cluster 2 H3 family member d, [Score=253, Expect=1e-87]; ENSG00000203852, HIST2H3A, histone cluster 2 H3 family member a, [Score=253, Expect=1e-87]; ENSG00000277775, HIST1H3F, histone cluster 1 H3 family member f, [Score=251, Expect=1e-86]; ENSG00000275379, HIST1H3I, histone cluster 1 H3 family member i, [Score=251, Expect=1e-86]; ENSG00000274750, HIST1H3E, histone cluster 1 H3 family member e, [Score=251, Expect=1e-86]; ENSG00000197153, HIST1H3J, histone cluster 1 H3 family member j, [Score=251, Expect=1e-86]; ENSG00000197409, HIST1H3D, histone cluster 1 H3 family member d, [Score=251, Expect=1e-86]; ENSG00000278272, HIST1H3C, histone cluster 1 H3 family member c, [Score=251, Expect=1e-86]; ENSG00000273983, HIST1H3G, histone cluster 1 H3 family member g, [Score=251, Expect=1e-86]; ENSG00000275714, HIST1H3A, histone cluster 1 H3 family member a, [Score=251, Expect=1e-86]; ENSG00000274267, HIST1H3B, histone cluster 1 H3 family member b, [Score=251, Expect=1e-86]; ENSG00000278828, HIST1H3H, histone cluster 1 H3 family member h, [Score=251, Expect=1e-86]; ENSG00000203818, HIST2H3PS2, histone cluster 2 H3 pseudogene 2, [Score=245, Expect=2e-84]; ENSG00000285435, HIST3H3, histone cluster 3 H3, [Score=245, Expect=2e-84]; ENSG00000168148, HIST3H3, histone cluster 3 H3, [Score=245, Expect=2e-84]} {Mouse: ENSMUSG00000016559, H3f3b, H3 histone, family 3B, [Score=256, Expect=4e-89]; ENSMUSG00000060743, H3f3a, H3 histone, family 3A, [Score=256, Expect=4e-89]; ENSMUSG00000099583, Hist1h3d, histone cluster 1, H3d, [Score=253, Expect=1e-87]; ENSMUSG00000100210, Hist1h3f, histone cluster 1, H3f, [Score=253, Expect=1e-87]; ENSMUSG00000069310, Hist1h3c, histone cluster 1, H3c, [Score=253, Expect=1e-87]; ENSMUSG00000069267, Hist1h3b, histone cluster 1, H3b, [Score=253, Expect=1e-87]; ENSMUSG00000074403, Hist2h3b, histone cluster 2, H3b, [Score=253, Expect=1e-87]; ENSMUSG00000081058, Hist2h3c2, histone cluster 2, H3c2, [Score=253, Expect=1e-87]; ENSMUSG00000069273, Hist1h3e, histone cluster 1, H3e, [Score=253, Expect=1e-87]; ENSMUSG00000093769, Hist2h3c1, histone cluster 2, H3c1, [Score=253, Expect=1e-87]; ENSMUSG00000099517, Hist1h3g, histone cluster 1, H3g, [Score=251, Expect=8e-87]; ENSMUSG00000101355, Hist1h3h, histone cluster 1, H3h, [Score=251, Expect=8e-87]; ENSMUSG00000101972, Hist1h3i, histone cluster 1, H3i, [Score=251, Expect=8e-87]; ENSMUSG00000069265, Hist1h3a, histone cluster 1, H3a, [Score=251, Expect=8e-87]} {Dmel: FBgn0004828, His3.3B, Histone H3.3B, [Score=256, Expect=3e-89]} {Celegans: WBGene00012276, his-74, Histone H3.3-like type 2, [RH, Score=253, Expect=4e-88]} {Smed: dd_Smed_v6_532_0_1, dd_Smed_v6_532_0_1, [Score=257, Expect=1e-89]} {RNA1509_6247} {RNA1310_28498} {RNA815_17879.4} |
| 3. | MligTC455_13580 | 20 | 0.41 | Mlig455_047770 | Neo: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_047770 {REF} {Length: 1095} {NoTransDecoderORF} {RNA1509_29723} {RNA1310_30147} {RNA815_20083} | |
| 4. | MligTC455_24401 | 64 | 1.34 | Mlig455_026103 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_026103 {REF} {Length: 5270} {RNA1509_55157} {RNA1310_33181} {RNA815_16598} | |
| 5. | MligTC455_08493 | 72 | 1.49 | Mlig455_025936 | Neo: - Age: - Region-enriched R7: 3.019/0.01940 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_025936 {REF} {Length: 2399} {Pfam: LicD family [PF04991.15, score=46.9]} {Smed: dd_Smed_v6_5971_0_1, dd_Smed_v6_5971_0_1, [Score=68.9, Expect=2e-13]} {RNA1310_25034} {RNA815_33191} |
Berezikov Lab - 2020-2021 © ERIBA