Data search


search
Exact
Search

Results for MligTC455_33294

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33294 34 0.71 Mlig455_018453

Neo: -

Age: -

ECHDC2 Mlig455_018453 {REF} {Length: 1518} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=119.5]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=48.0]} {Human: ENSG00000121310, ECHDC2, enoyl-CoA hydratase domain containing 2, [Score=95.1, Expect=3e-22]} {Mouse: ENSMUSG00000028601, Echdc2, enoyl Coenzyme A hydratase domain containing 2, [Score=92.0, Expect=3e-21]} {Dmel: FBgn0038049, CG5844, [Score=199, Expect=2e-61]} {Celegans: WBGene00001152, ech-3, Enoyl-CoA Hydratase, [Score=207, Expect=3e-66]} {Smed: dd_Smed_v6_2900_0_1, dd_Smed_v6_2900_0_1, [Score=96.7, Expect=2e-23]} {RNA1509_30262} {RNA1310_14575.1} {RNA815_17492}

Cumulative graph for MligTC455_33294

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.376 1.231 1.00000 1.00000
RegionR2 -1.048 1.231 1.00000 1.00000
RegionR3 1.889 1.231 0.10299 0.56147
RegionR4 0.341 1.231 0.49150 0.81815
RegionR5 2.428 1.231 0.02237 0.10513
RegionR6 2.248 1.231 0.06502 0.47775
RegionR7 -1.759 1.231 0.99965 1.00000
RegionR8 -1.723 1.231 0.99963 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.448 1.231 0.99994 1.00000
RegenerationR2 3.489 1.231 0.01773 0.21873
RegenerationR3 1.047 1.231 0.35620 0.77380
RegenerationR4 1.5 1.231 0.27814 0.72343
RegenerationR5 0.724 1.231 0.39755 0.79771
RegenerationR6 -0.463 1.231 0.75903 0.95617
RegenerationBL 3.433 1.231 0.10525 0.38294
RegenerationTP 3.57 1.231 0.21522 0.65799


Genes with expression patterns similar to MligTC455_33294

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33294 34 0.71 Mlig455_018453

Neo: -

Age: -

ECHDC2 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_018453 {REF} {Length: 1518} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=119.5]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=48.0]} {Human: ENSG00000121310, ECHDC2, enoyl-CoA hydratase domain containing 2, [Score=95.1, Expect=3e-22]} {Mouse: ENSMUSG00000028601, Echdc2, enoyl Coenzyme A hydratase domain containing 2, [Score=92.0, Expect=3e-21]} {Dmel: FBgn0038049, CG5844, [Score=199, Expect=2e-61]} {Celegans: WBGene00001152, ech-3, Enoyl-CoA Hydratase, [Score=207, Expect=3e-66]} {Smed: dd_Smed_v6_2900_0_1, dd_Smed_v6_2900_0_1, [Score=96.7, Expect=2e-23]} {RNA1509_30262} {RNA1310_14575.1} {RNA815_17492}
2. MligTC455_15419 31 0.65 Mlig455_041511

Neo: Irradiation

Age: Down-Up-Up

2.511 - 0.971 - - 0.700 0.840 Mlig455_041511 {REF} {Length: 1060} {RNA1509_50501, RNA1509_52389} {RNA1310_37100, RNA1509_50501, RNA1509_52389} {RNA1509_50501, RNA1509_52389, RNA815_34228.2}
3. MligTC455_52776 568 11.83 Mlig455_014951, Mlig455_045141, Mlig455_045176

Neo: -

Age: -

FUT6 1.742 - - - - 0.788 0.954

Mlig455_014951 {REF} {Length: 3156} {Pfam: Glycosyltransferase family 10 (fucosyltransferase) C-term [PF00852.21, score=171.0]; Fucosyltransferase, N-terminal [PF17039.7, score=43.2]} {Human: ENSG00000156413, FUT6, fucosyltransferase 6, [Score=123, Expect=4e-31]; ENSG00000130383, FUT5, fucosyltransferase 5, [Score=121, Expect=4e-30]; ENSG00000180549, FUT7, fucosyltransferase 7, [Score=120, Expect=4e-30]; ENSG00000171124, FUT3, fucosyltransferase 3 (Lewis blood group), [Score=117, Expect=6e-29]} {Mouse: ENSMUSG00000036587, Fut7, fucosyltransferase 7, [Score=123, Expect=3e-31]} {Dmel: FBgn0036485, FucTA, [Score=140, Expect=2e-36]} {Celegans: WBGene00001505, fut-1, Alpha-(1,3)-fucosyltransferase fut-1, [Score=110, Expect=3e-26]} {Smed: dd_Smed_v6_8368_0_1, dd_Smed_v6_8368_0_1, [Score=140, Expect=6e-37]} {RNA1509_53629} {RNA1310_21454.2, RNA1509_53629} {RNA1509_53629, RNA815_20125}

Mlig455_045141 {REF} {Length: 2058} {Pfam: Glycosyltransferase family 10 (fucosyltransferase) C-term [PF00852.21, score=171.7]; Fucosyltransferase, N-terminal [PF17039.7, score=44.3]} {Human: ENSG00000156413, FUT6, fucosyltransferase 6, [Score=125, Expect=6e-32]; ENSG00000180549, FUT7, fucosyltransferase 7, [Score=124, Expect=2e-31]; ENSG00000130383, FUT5, fucosyltransferase 5, [Score=123, Expect=5e-31]; ENSG00000171124, FUT3, fucosyltransferase 3 (Lewis blood group), [Score=120, Expect=7e-30]} {Mouse: ENSMUSG00000036587, Fut7, fucosyltransferase 7, [Score=127, Expect=1e-32]} {Dmel: FBgn0036485, FucTA, [Score=137, Expect=1e-35]} {Celegans: WBGene00001505, fut-1, Alpha-(1,3)-fucosyltransferase fut-1, [Score=109, Expect=3e-26]} {Smed: dd_Smed_v6_8368_0_1, dd_Smed_v6_8368_0_1, [Score=140, Expect=5e-37]} {RNA1509_53629} {RNA1310_21454.2} {RNA815_20125}

Mlig455_045176 {REF} {Length: 3201} {Pfam: Glycosyltransferase family 10 (fucosyltransferase) C-term [PF00852.21, score=171.7]; Fucosyltransferase, N-terminal [PF17039.7, score=44.3]} {Human: ENSG00000156413, FUT6, fucosyltransferase 6, [Score=125, Expect=6e-32]; ENSG00000180549, FUT7, fucosyltransferase 7, [Score=124, Expect=2e-31]; ENSG00000130383, FUT5, fucosyltransferase 5, [Score=123, Expect=5e-31]; ENSG00000171124, FUT3, fucosyltransferase 3 (Lewis blood group), [Score=120, Expect=7e-30]} {Mouse: ENSMUSG00000036587, Fut7, fucosyltransferase 7, [Score=127, Expect=1e-32]} {Dmel: FBgn0036485, FucTA, [Score=137, Expect=1e-35]} {Celegans: WBGene00001505, fut-1, Alpha-(1,3)-fucosyltransferase fut-1, [Score=109, Expect=3e-26]} {Smed: dd_Smed_v6_8368_0_1, dd_Smed_v6_8368_0_1, [Score=140, Expect=5e-37]} {RNA1509_53629} {RNA1310_21454.2} {RNA815_20125}
4. MligTC455_47724 33 0.69 Mlig455_019262

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.666

ANK2 1.716 0.739 - - - - 0.977 Mlig455_019262 {REF} {Length: 2041} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=141.5]; Ankyrin repeats (many copies) [PF13637.8, score=111.3]; Ankyrin repeat [PF13606.8, score=94.1]; Ankyrin repeat [PF00023.32, score=92.6]; Ankyrin repeats (many copies) [PF13857.8, score=88.8]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=97.4, Expect=1e-20]; ENSG00000151150, ANK3, ankyrin 3, [Score=95.5, Expect=9e-20]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=96.3, Expect=3e-20]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=95.9, Expect=4e-20]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=82.8, Expect=2e-16]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=83.2, Expect=1e-16]} {RNA1509_10844} {RNA1310_6519} {RNA815_7473}
5. MligTC455_48593 204 4.26 Mlig455_055689

Neo: -

Age: -

Region-enriched R5: 1.952/0.02021

CERCAM 1.659 - - - - 0.703 0.956 Mlig455_055689 {REF} {Length: 4188} {TRANSSPLICED} {Pfam: Calcium-activated chloride channel [PF04547.14, score=323.8]; Glycosyltransferase family 25 (LPS biosynthesis protein) [PF01755.19, score=71.2]; Glycosyl transferase family 2 [PF13704.8, score=24.9]; Glycosyl transferase family 2 [PF00535.28, score=18.7]} {Human: ENSG00000167123, CERCAM, cerebral endothelial cell adhesion molecule, [Score=258, Expect=2e-73]; ENSG00000130309, COLGALT1, collagen beta(1-O)galactosyltransferase 1, [Score=246, Expect=2e-69]} {Mouse: ENSMUSG00000037949, Ano10, anoctamin 10, [Score=164, Expect=1e-41]; ENSMUSG00000032649, Colgalt2, collagen beta(1-O)galactosyltransferase 2, [Score=163, Expect=2e-42]} {Dmel: FBgn0036235, CG6938, [Score=152, Expect=8e-37]} {Celegans: WBGene00008426, D2045.9, [Score=139, Expect=3e-34]} {Smed: dd_Smed_v6_11681_0_1, dd_Smed_v6_11681_0_1, [Score=244, Expect=2e-69]} {RNA1509_37598} {RNA1310_11461} {RNA815_36687}
6. MligTC455_35292 34 0.72 Mlig455_063488

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.544

TMEM9 0.965 - - - - - 0.965 Mlig455_063488 {REF} {Length: 2057} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=65.9]} {Human: ENSG00000116857, TMEM9, transmembrane protein 9, [Score=46.6, Expect=8e-06]} {Celegans: WBGene00020026, R12C12.6, [RH, Score=57.0, Expect=2e-09]} {RNA1509_36378} {RNA1310_37814.1} {RNA815_28046}
7. MligTC455_13576 29 0.61 Mlig455_054113

Neo: -

Age: -

Regeneration-upregulated R2: 5.145

Regeneration-enriched R2: 5.145

0.955 - - - - - 0.955 Mlig455_054113 {REF} {Length: 5953} {RNA1509_49393} {RNA1310_44225} {RNA815_34559}
8. MligTC455_52025 404 8.41 Mlig455_045543, Mlig455_052640, Mlig455_061469, Mlig455_065710

Neo: -

Age: logFC(26M/2M)=-0.443

0.951 - - - - 0.951 -

Mlig455_045543 {REF} {Length: 2558} {Pfam: DDE superfamily endonuclease [PF13358.8, score=44.8]; Transposase [PF01498.20, score=27.1]; Sigma-70, region 4 [PF08281.14, score=20.3]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=64.7, Expect=2e-12]} {RNA1509_49770} {RNA1310_23537.1} {RNA815_17315.1}

Mlig455_052640 {REF} {Length: 2451} {Pfam: DDE superfamily endonuclease [PF13358.8, score=44.9]; Transposase [PF01498.20, score=27.1]; Sigma-70, region 4 [PF08281.14, score=20.3]} {Smed: dd_Smed_v6_16239_0_3, dd_Smed_v6_16239_0_3, [Score=64.7, Expect=2e-12]} {RNA1509_49770} {RNA1310_23537.1} {RNA815_17315.1}

Mlig455_061469 {REF} {Length: 3775} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.3]; Transposase [PF01498.20, score=27.9]; Sigma-70, region 4 [PF08281.14, score=20.3]} {Smed: dd_Smed_v6_16239_0_3, dd_Smed_v6_16239_0_3, [Score=65.1, Expect=2e-12]} {RNA1509_49770} {RNA1310_23537.1} {RNA815_17315.1}

Mlig455_065710 {REF} {Length: 2325} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.1]; Transposase [PF01498.20, score=27.1]; Sigma-70, region 4 [PF08281.14, score=20.3]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=63.5, Expect=6e-12]} {RNA1509_49770} {RNA1310_23537.1} {RNA815_17315.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA