Data search
Results for MligTC455_33320
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33320 | 535 | 11.15 | Mlig455_022764 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.263/0.04865 |
RNF168 | Mlig455_022764 {REF} {Length: 2944} {TRANSSPLICED} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=24.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.3]; RING-type zinc-finger [PF13445.8, score=22.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.7]; Prokaryotic RING finger family 4 [PF14447.8, score=21.1]} {Human: ENSG00000163961, RNF168, ring finger protein 168, [RH, Score=83.2, Expect=1e-16]} {Mouse: ENSMUSG00000014074, Rnf168, ring finger protein 168, [RH, Score=86.3, Expect=7e-18]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=49.3, Expect=3e-06]} {RNA1509_33120} {RNA1310_8658, RNA1509_33120} {RNA1509_33120, RNA815_14854} |
Cumulative graph for MligTC455_33320
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.713 | 3.619 | 0.56697 | 1.00000 | |
| RegionR2 | 0.163 | 3.619 | 0.78812 | 1.00000 | |
| RegionR3 | -0.382 | 3.619 | 0.47365 | 0.97875 | |
| RegionR4 | 1.263 | 3.619 | 0.00738 | 0.04865 | |
| RegionR5 | 0.544 | 3.619 | 0.19660 | 0.48449 | |
| RegionR6 | 0.595 | 3.619 | 0.21869 | 0.79848 | |
| RegionR7 | 0.752 | 3.619 | 0.20595 | 0.81664 | |
| RegionR8 | -2.222 | 3.619 | 0.05021 | 0.43968 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.119 | 3.619 | 0.11022 | 0.83455 | |
| RegenerationR2 | 0.342 | 3.619 | 0.48967 | 0.86753 | |
| RegenerationR3 | 1.078 | 3.619 | 0.04776 | 0.38048 | |
| RegenerationR4 | 0.001 | 3.619 | 0.99439 | 1.00000 | |
| RegenerationR5 | 0.63 | 3.619 | 0.15824 | 0.58028 | |
| RegenerationR6 | 0.776 | 3.619 | 0.12171 | 0.42937 | |
| RegenerationBL | 1.578 | 3.619 | 0.01547 | 0.13122 | |
| RegenerationTP | 1.119 | 3.619 | 0.19298 | 0.63151 |
Genes with expression patterns similar to MligTC455_33320
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33320 | 535 | 11.15 | Mlig455_022764 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.263/0.04865 |
RNF168 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_022764 {REF} {Length: 2944} {TRANSSPLICED} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=24.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.3]; RING-type zinc-finger [PF13445.8, score=22.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.7]; Prokaryotic RING finger family 4 [PF14447.8, score=21.1]} {Human: ENSG00000163961, RNF168, ring finger protein 168, [RH, Score=83.2, Expect=1e-16]} {Mouse: ENSMUSG00000014074, Rnf168, ring finger protein 168, [RH, Score=86.3, Expect=7e-18]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=49.3, Expect=3e-06]} {RNA1509_33120} {RNA1310_8658, RNA1509_33120} {RNA1509_33120, RNA815_14854} |
| 2. | MligTC455_44179 | 915 | 19.06 | Mlig455_011678, Mlig455_049913 | Neo: Int S/G2/M Age: - |
GNPTG | 1.699 | - | - | - | - | 0.745 | 0.954 | Mlig455_011678 {REF} {Length: 3839} {TRANSSPLICED} {Pfam: Neurochondrin [PF05536.13, score=36.4]; Glucosidase II beta subunit-like protein [PF13015.8, score=25.2]} {Human: ENSG00000090581, GNPTG, N-acetylglucosamine-1-phosphate transferase subunit gamma, [Score=52.0, Expect=1e-06]} {Mouse: ENSMUSG00000035521, Gnptg, N-acetylglucosamine-1-phosphotransferase, gamma subunit, [Score=55.5, Expect=7e-08]} {RNA1509_14061} {RNA1310_8748.1} {RNA815_4891.1} Mlig455_049913 {REF} {Length: 4432} {TRANSSPLICED} {Pfam: Neurochondrin [PF05536.13, score=55.0]; Glucosidase II beta subunit-like protein [PF13015.8, score=29.1]} {Human: ENSG00000090581, GNPTG, N-acetylglucosamine-1-phosphate transferase subunit gamma, [RH, Score=100, Expect=3e-22]} {Mouse: ENSMUSG00000035521, Gnptg, N-acetylglucosamine-1-phosphotransferase, gamma subunit, [RH, Score=101, Expect=7e-23]} {Dmel: FBgn0032643, GCS2beta, Glucosidase 2 beta subunit, [Score=62.4, Expect=1e-09]} {RNA1509_14061} {RNA1310_8748.1} {RNA815_4891.1} |
| 3. | MligTC455_53674 | 391 | 8.15 | Mlig455_064986 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.425/0.00055 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_064986 {REF} {Length: 2834} {TRANSSPLICED} {RNA1509_57343} {RNA1310_13307, RNA1509_57343} {RNA1509_57343, RNA815_15006.1} | |
| 4. | MligTC455_48381 | 400 | 8.34 | Mlig455_024700 | Neo: - Age: - Region-enriched R2: 2.412/0.00825 |
PRPF18 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_024700 {REF} {Length: 1807} {Pfam: Prp18 domain [PF02840.17, score=177.2]; pre-mRNA processing factor 4 (PRP4) like [PF08799.13, score=36.9]} {Human: ENSG00000165630, PRPF18, pre-mRNA processing factor 18, [RH, Score=253, Expect=7e-82]} {Mouse: ENSMUSG00000039449, Prpf18, pre-mRNA processing factor 18, [RH, Score=252, Expect=3e-81]} {Dmel: FBgn0027784, Prp18, [RH, Score=255, Expect=6e-83]} {Celegans: WBGene00009320, F32B6.3, [RH, Score=199, Expect=7e-61]} {Smed: dd_Smed_v6_7260_0_1, dd_Smed_v6_7260_0_1, [RH, Score=241, Expect=4e-77]} {RNA1509_45931, RNA1509_7732} {RNA1310_23290, RNA1509_45931, RNA1509_7732} {RNA1509_45931, RNA1509_7732, RNA815_1460.1} |
| 5. | MligTC455_37966 | 132 | 2.75 | Mlig455_068209 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.816/0.00001 Regeneration-upregulated R3: 5.497 Regeneration-enriched R3: 5.497 |
SPO11 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_068209 {REF} {Length: 2220} {TRANSSPLICED} {Pfam: Type IIB DNA topoisomerase [PF04406.16, score=52.9]} {Human: ENSG00000054796, SPO11, SPO11, initiator of meiotic double stranded breaks, [RH, Score=147, Expect=2e-40]} {Mouse: ENSMUSG00000005883, Spo11, SPO11 meiotic protein covalently bound to DSB, [RH, Score=152, Expect=2e-42]} {Dmel: FBgn0002716, mei-W68, meiotic W68, [RH, Score=100, Expect=5e-24]} {Celegans: WBGene00004985, spo-11, Meiotic recombination protein spo-11, [RH, Score=121, Expect=7e-31]} {Smed: dd_Smed_v6_43889_0_1, dd_Smed_v6_43889_0_1, [RH, Score=94.7, Expect=4e-23]} {RNA1509_18827} {RNA1310_30958} {RNA815_2962.1} |
| 6. | MligTC455_54079 | 12019 | 250.4 | Mlig455_012949, Mlig455_012959 | Neo: Int S/G2/M Age: - |
PSMD12 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_012949 {REF} {Length: 1819} {Pfam: PCI domain [PF01399.29, score=54.3]; 26S proteasome regulatory subunit RPN5 C-terminal domain [PF18098.3, score=46.3]} {Human: ENSG00000197170, PSMD12, proteasome 26S subunit, non-ATPase 12, [RH, Score=431, Expect=2e-148]} {Mouse: ENSMUSG00000020720, Psmd12, proteasome (prosome, macropain) 26S subunit, non-ATPase, 12, [RH, Score=433, Expect=2e-149]} {Dmel: FBgn0028690, Rpn5, Regulatory particle non-ATPase 5, [RH, Score=260, Expect=1e-81]} {Celegans: WBGene00004461, rpn-5, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=298, Expect=1e-96]} {Smed: dd_Smed_v6_2546_0_1, dd_Smed_v6_2546_0_1, [RH, Score=361, Expect=1e-121]} {RNA1509_13071, RNA1509_1594, RNA1509_20902} {RNA1310_16976, RNA1509_13071, RNA1509_1594, RNA1509_20902} {RNA1509_13071, RNA1509_1594, RNA1509_20902, RNA815_6594} Mlig455_012959 {REF} {Length: 1913} {Pfam: PCI domain [PF01399.29, score=51.7]; 26S proteasome regulatory subunit RPN5 C-terminal domain [PF18098.3, score=46.3]} {Human: ENSG00000197170, PSMD12, proteasome 26S subunit, non-ATPase 12, [RH, Score=431, Expect=1e-148]} {Mouse: ENSMUSG00000020720, Psmd12, proteasome (prosome, macropain) 26S subunit, non-ATPase, 12, [RH, Score=435, Expect=3e-150]} {Dmel: FBgn0028690, Rpn5, Regulatory particle non-ATPase 5, [RH, Score=262, Expect=2e-82]} {Celegans: WBGene00004461, rpn-5, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=299, Expect=5e-97]} {Smed: dd_Smed_v6_2546_0_1, dd_Smed_v6_2546_0_1, [RH, Score=362, Expect=4e-122]} {RNA1509_1594} {RNA1310_16976} {RNA815_6594} |