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Results for MligTC455_33321

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33321 16459 342.89 Mlig455_029136

Neo: -

Age: -

 PABPC1 Mlig455_029136 {REF} {Length: 3397} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=195.3]; Poly-adenylate binding protein, unique domain [PF00658.20, score=101.3]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=30.9]} {Human: ENSG00000070756, PABPC1, poly(A) binding protein cytoplasmic 1, [Score=494, Expect=1e-168]} {Mouse: ENSMUSG00000022283, Pabpc1, poly(A) binding protein, cytoplasmic 1, [Score=494, Expect=1e-168]} {Dmel: FBgn0265297, pAbp, poly(A) binding protein, [Score=482, Expect=8e-164]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [Score=464, Expect=1e-157]} {Smed: dd_Smed_v6_11729_0_1, dd_Smed_v6_11729_0_1, [Score=518, Expect=2e-177]} {RNA1509_1727, RNA1509_17489, RNA1509_17581, RNA1509_307, RNA1509_3931, RNA1509_40015, RNA1509_4561, RNA1509_5601} {RNA1310_12062, RNA1509_1727, RNA1509_17489, RNA1509_17581, RNA1509_307, RNA1509_3931, RNA1509_40015, RNA1509_4561, RNA1509_5601} {RNA1509_1727, RNA1509_17489, RNA1509_17581, RNA1509_307, RNA1509_3931, RNA1509_40015, RNA1509_4561, RNA1509_5601, RNA815_1032}

Cumulative graph for MligTC455_33321

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.916 8.485 0.00837 0.27066
RegionR2 -0.134 8.485 0.57659 0.93383
RegionR3 0.217 8.485 0.28361 0.82684
RegionR4 0.466 8.485 0.04593 0.18215
RegionR5 0.305 8.485 0.12563 0.35738
RegionR6 0.225 8.485 0.27240 0.86128
RegionR7 0.083 8.485 0.69313 1.00000
RegionR8 -0.246 8.485 0.31163 0.94414

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.275 8.485 0.52376 1.00000
RegenerationR2 0.028 8.485 0.91336 1.00000
RegenerationR3 -0.194 8.485 0.46884 0.84302
RegenerationR4 0.03 8.485 0.91313 1.00000
RegenerationR5 0.212 8.485 0.42313 0.81337
RegenerationR6 0.048 8.485 0.85371 1.00000
RegenerationBL 0.285 8.485 0.21638 0.56251
RegenerationTP -0.225 8.485 0.37722 0.81318


Genes with expression patterns similar to MligTC455_33321

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33321 16459 342.89 Mlig455_029136

Neo: -

Age: -

 PABPC1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_029136 {REF} {Length: 3397} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=195.3]; Poly-adenylate binding protein, unique domain [PF00658.20, score=101.3]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=30.9]} {Human: ENSG00000070756, PABPC1, poly(A) binding protein cytoplasmic 1, [Score=494, Expect=1e-168]} {Mouse: ENSMUSG00000022283, Pabpc1, poly(A) binding protein, cytoplasmic 1, [Score=494, Expect=1e-168]} {Dmel: FBgn0265297, pAbp, poly(A) binding protein, [Score=482, Expect=8e-164]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [Score=464, Expect=1e-157]} {Smed: dd_Smed_v6_11729_0_1, dd_Smed_v6_11729_0_1, [Score=518, Expect=2e-177]} {RNA1509_1727, RNA1509_17489, RNA1509_17581, RNA1509_307, RNA1509_3931, RNA1509_40015, RNA1509_4561, RNA1509_5601} {RNA1310_12062, RNA1509_1727, RNA1509_17489, RNA1509_17581, RNA1509_307, RNA1509_3931, RNA1509_40015, RNA1509_4561, RNA1509_5601} {RNA1509_1727, RNA1509_17489, RNA1509_17581, RNA1509_307, RNA1509_3931, RNA1509_40015, RNA1509_4561, RNA1509_5601, RNA815_1032}
2. MligTC455_25502 1050 21.88 Mlig455_032307

Neo: Int S/G2/M

Age: Up-Down-Up

 TMLHE 0.96 - - - - - 0.960 Mlig455_032307 {REF} {Length: 3371} {Pfam: Gamma-butyrobetaine hydroxylase-like, N-terminal [PF06155.14, score=43.3]} {Human: ENSG00000185973, TMLHE, trimethyllysine hydroxylase, epsilon, [Score=96.7, Expect=4e-21]} {Mouse: ENSMUSG00000079834, Tmlhe, trimethyllysine hydroxylase, epsilon, [Score=106, Expect=2e-24]} {Dmel: FBgn0038795, CG4335, [Score=102, Expect=2e-23]} {Celegans: WBGene00001523, gbh-2, Gamma Butyrobetaine Hydroxylase, [Score=82.8, Expect=8e-17]} {RNA1509_30257, RNA1509_44004} {RNA1310_21502.1, RNA1509_30257, RNA1509_44004} {RNA1509_30257, RNA1509_44004, RNA815_26215}
3. Mlig999028.1 0.957 - - - - - 0.957
4. MligTC455_25180 601 12.51 Mlig455_011382

Neo: -

Age: -

 SCRIB 0.955 - - - 0.955 - - Mlig455_011382 {REF} {Length: 5466} {Pfam: PDZ domain [PF00595.26, score=131.4]; Leucine rich repeat [PF13855.8, score=129.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=84.9]; PDZ domain [PF17820.3, score=69.6]; PDZ domain [PF13180.8, score=38.6]; Leucine-rich repeat [PF14580.8, score=26.2]} {Human: ENSG00000180900, SCRIB, scribbled planar cell polarity protein, [Score=415, Expect=7e-122]; ENSG00000274287, SCRIB, scribbled planar cell polarity protein, [Score=415, Expect=7e-122]} {Mouse: ENSMUSG00000022568, Scrib, scribbled planar cell polarity, [Score=372, Expect=4e-107]; ENSMUSG00000032352, Lrrc1, leucine rich repeat containing 1, [Score=355, Expect=6e-110]} {Dmel: FBgn0263289, scrib, scribbled, [Score=375, Expect=5e-110]} {Celegans: WBGene00002632, let-413, [Score=300, Expect=4e-88]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=415, Expect=5e-124]} {RNA1509_5655} {RNA1310_721.1, RNA1509_5655} {RNA1509_5655, RNA815_2951}

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