TomoSeq data search

Data search

Results for MligTC455_33323

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33323	6803	141.72	Mlig455_040201, Mlig455_056721	Neo: - Age: -	PABPC1	Mlig455_040201 {REF} {Length: 3789} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=277.8]; Poly-adenylate binding protein, unique domain [PF00658.20, score=100.8]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=37.2]; RNA recognition motif [PF16367.7, score=32.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=31.7]; Histone lysine methyltransferase SET associated [PF11767.10, score=19.3]} {Human: ENSG00000070756, PABPC1, poly(A) binding protein cytoplasmic 1, [Score=708, Expect=0.0]} {Mouse: ENSMUSG00000022283, Pabpc1, poly(A) binding protein, cytoplasmic 1, [Score=709, Expect=0.0]} {Dmel: FBgn0265297, pAbp, poly(A) binding protein, [Score=671, Expect=0.0]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [Score=655, Expect=0.0]} {Smed: dd_Smed_v6_11729_0_1, dd_Smed_v6_11729_0_1, [Score=711, Expect=0.0]} {RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867} {RNA1310_12062, RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867} {RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867, RNA815_5842.1} Mlig455_056721 {REF} {Length: 499} {NoTransDecoderORF}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33323

6803

141.72

Mlig455_040201, Mlig455_056721

Neo: -

Age: -

PABPC1

Mlig455_040201 {REF} {Length: 3789} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=277.8]; Poly-adenylate binding protein, unique domain [PF00658.20, score=100.8]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=37.2]; RNA recognition motif [PF16367.7, score=32.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=31.7]; Histone lysine methyltransferase SET associated [PF11767.10, score=19.3]} {Human: ENSG00000070756, PABPC1, poly(A) binding protein cytoplasmic 1, [Score=708, Expect=0.0]} {Mouse: ENSMUSG00000022283, Pabpc1, poly(A) binding protein, cytoplasmic 1, [Score=709, Expect=0.0]} {Dmel: FBgn0265297, pAbp, poly(A) binding protein, [Score=671, Expect=0.0]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [Score=655, Expect=0.0]} {Smed: dd_Smed_v6_11729_0_1, dd_Smed_v6_11729_0_1, [Score=711, Expect=0.0]} {RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867} {RNA1310_12062, RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867} {RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867, RNA815_5842.1}

Mlig455_056721 {REF} {Length: 499} {NoTransDecoderORF}

Cumulative graph for MligTC455_33323

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.008	7.286	0.01954	0.38750
RegionR2	0.747	7.286	0.00159	0.02987
RegionR3	0.527	7.286	0.00520	0.09782
RegionR4	-0.432	7.286	0.05679	0.21029
RegionR5	-0.175	7.286	0.33694	0.68323
RegionR6	0.099	7.286	0.60672	1.00000
RegionR7	0.071	7.286	0.73002	1.00000
RegionR8	0.17	7.286	0.48521	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.888	7.286	0.14582	0.88591
RegenerationR2	-0.511	7.286	0.02561	0.26412
RegenerationR3	-0.296	7.286	0.22910	0.66394
RegenerationR4	-0.062	7.286	0.80523	0.98783
RegenerationR5	-0.16	7.286	0.50275	0.85997
RegenerationR6	-0.208	7.286	0.39600	0.73446
RegenerationBL	0.104	7.286	0.66783	1.00000
RegenerationTP	-0.564	7.286	0.04332	0.34529

Genes with expression patterns similar to MligTC455_33323

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33323	6803	141.72	Mlig455_040201, Mlig455_056721	Neo: - Age: -	PABPC1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040201 {REF} {Length: 3789} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=277.8]; Poly-adenylate binding protein, unique domain [PF00658.20, score=100.8]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=37.2]; RNA recognition motif [PF16367.7, score=32.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=31.7]; Histone lysine methyltransferase SET associated [PF11767.10, score=19.3]} {Human: ENSG00000070756, PABPC1, poly(A) binding protein cytoplasmic 1, [Score=708, Expect=0.0]} {Mouse: ENSMUSG00000022283, Pabpc1, poly(A) binding protein, cytoplasmic 1, [Score=709, Expect=0.0]} {Dmel: FBgn0265297, pAbp, poly(A) binding protein, [Score=671, Expect=0.0]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [Score=655, Expect=0.0]} {Smed: dd_Smed_v6_11729_0_1, dd_Smed_v6_11729_0_1, [Score=711, Expect=0.0]} {RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867} {RNA1310_12062, RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867} {RNA1509_10708, RNA1509_35405, RNA1509_40211, RNA1509_6647, RNA1509_6867, RNA815_5842.1} Mlig455_056721 {REF} {Length: 499} {NoTransDecoderORF}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts