TomoSeq data search

Data search

Results for MligTC455_33347

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33347	1338	27.88	Mlig455_050565, Mlig455_050572	Neo: Int S/G2/M Age: -	POLR2A	Mlig455_050565 {REF} {Length: 6755} {Pfam: RNA polymerase Rpb1, domain 1 [PF04997.14, score=361.6]; RNA polymerase Rpb1, domain 5 [PF04998.19, score=336.1]; RNA polymerase Rpb1, domain 2 [PF00623.22, score=244.2]; RNA polymerase Rpb1, domain 6 [PF04992.16, score=220.5]; RNA polymerase Rpb1, domain 3 [PF04983.20, score=172.8]; RNA polymerase Rpb1, domain 7 [PF04990.14, score=169.7]; RNA polymerase Rpb1, domain 4 [PF05000.19, score=128.1]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=24.9]} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [RH, Score=2395, Expect=0.0]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [RH, Score=2395, Expect=0.0]} {Dmel: FBgn0003277, RpII215, RNA polymerase II 215kD subunit, [RH, Score=2326, Expect=0.0]} {Celegans: WBGene00000123, ama-1, DNA-directed RNA polymerase II subunit RPB1, [RH, Score=2301, Expect=0.0]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [RH, Score=2084, Expect=0.0]} {RNA1509_11421} {RNA1310_513.1} {RNA815_145} Mlig455_050572 {REF} {Length: 6351} {Pfam: RNA polymerase Rpb1, domain 1 [PF04997.14, score=362.1]; RNA polymerase Rpb1, domain 5 [PF04998.19, score=336.1]; RNA polymerase Rpb1, domain 2 [PF00623.22, score=244.2]; RNA polymerase Rpb1, domain 6 [PF04992.16, score=220.5]; RNA polymerase Rpb1, domain 3 [PF04983.20, score=172.8]; RNA polymerase Rpb1, domain 7 [PF04990.14, score=169.7]; RNA polymerase Rpb1, domain 4 [PF05000.19, score=128.1]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=24.1]} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [RH, Score=2395, Expect=0.0]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [RH, Score=2395, Expect=0.0]} {Dmel: FBgn0003277, RpII215, RNA polymerase II 215kD subunit, [RH, Score=2326, Expect=0.0]} {Celegans: WBGene00000123, ama-1, DNA-directed RNA polymerase II subunit RPB1, [RH, Score=2301, Expect=0.0]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [RH, Score=2084, Expect=0.0]} {RNA1509_11421} {RNA1310_513.1} {RNA815_145}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33347

1338

27.88

Mlig455_050565, Mlig455_050572

Neo: Int S/G2/M

Age: -

POLR2A

Mlig455_050565 {REF} {Length: 6755} {Pfam: RNA polymerase Rpb1, domain 1 [PF04997.14, score=361.6]; RNA polymerase Rpb1, domain 5 [PF04998.19, score=336.1]; RNA polymerase Rpb1, domain 2 [PF00623.22, score=244.2]; RNA polymerase Rpb1, domain 6 [PF04992.16, score=220.5]; RNA polymerase Rpb1, domain 3 [PF04983.20, score=172.8]; RNA polymerase Rpb1, domain 7 [PF04990.14, score=169.7]; RNA polymerase Rpb1, domain 4 [PF05000.19, score=128.1]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=24.9]} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [RH, Score=2395, Expect=0.0]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [RH, Score=2395, Expect=0.0]} {Dmel: FBgn0003277, RpII215, RNA polymerase II 215kD subunit, [RH, Score=2326, Expect=0.0]} {Celegans: WBGene00000123, ama-1, DNA-directed RNA polymerase II subunit RPB1, [RH, Score=2301, Expect=0.0]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [RH, Score=2084, Expect=0.0]} {RNA1509_11421} {RNA1310_513.1} {RNA815_145}

Mlig455_050572 {REF} {Length: 6351} {Pfam: RNA polymerase Rpb1, domain 1 [PF04997.14, score=362.1]; RNA polymerase Rpb1, domain 5 [PF04998.19, score=336.1]; RNA polymerase Rpb1, domain 2 [PF00623.22, score=244.2]; RNA polymerase Rpb1, domain 6 [PF04992.16, score=220.5]; RNA polymerase Rpb1, domain 3 [PF04983.20, score=172.8]; RNA polymerase Rpb1, domain 7 [PF04990.14, score=169.7]; RNA polymerase Rpb1, domain 4 [PF05000.19, score=128.1]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=24.1]} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [RH, Score=2395, Expect=0.0]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [RH, Score=2395, Expect=0.0]} {Dmel: FBgn0003277, RpII215, RNA polymerase II 215kD subunit, [RH, Score=2326, Expect=0.0]} {Celegans: WBGene00000123, ama-1, DNA-directed RNA polymerase II subunit RPB1, [RH, Score=2301, Expect=0.0]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [RH, Score=2084, Expect=0.0]} {RNA1509_11421} {RNA1310_513.1} {RNA815_145}

Cumulative graph for MligTC455_33347

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.795	5.096	0.08172	0.62377
RegionR2	0.434	5.096	0.33993	0.73207
RegionR3	0.651	5.096	0.06602	0.45319
RegionR4	0.71	5.096	0.10182	0.31107
RegionR5	0.765	5.096	0.01998	0.09699
RegionR6	0.215	5.096	0.55805	1.00000
RegionR7	-0.079	5.096	0.85887	1.00000
RegionR8	-0.902	5.096	0.10967	0.61600

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.236	5.096	0.06370	0.73891
RegenerationR2	-0.218	5.096	0.58764	0.90992
RegenerationR3	-0.212	5.096	0.62201	0.91741
RegenerationR4	-0.306	5.096	0.50032	0.86967
RegenerationR5	0.091	5.096	0.82254	0.99498
RegenerationR6	0.292	5.096	0.50088	0.80690
RegenerationBL	-0.722	5.096	0.19021	0.52382
RegenerationTP	-0.145	5.096	0.79473	1.00000

Genes with expression patterns similar to MligTC455_33347

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33347	1338	27.88	Mlig455_050565, Mlig455_050572	Neo: Int S/G2/M Age: -	POLR2A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050565 {REF} {Length: 6755} {Pfam: RNA polymerase Rpb1, domain 1 [PF04997.14, score=361.6]; RNA polymerase Rpb1, domain 5 [PF04998.19, score=336.1]; RNA polymerase Rpb1, domain 2 [PF00623.22, score=244.2]; RNA polymerase Rpb1, domain 6 [PF04992.16, score=220.5]; RNA polymerase Rpb1, domain 3 [PF04983.20, score=172.8]; RNA polymerase Rpb1, domain 7 [PF04990.14, score=169.7]; RNA polymerase Rpb1, domain 4 [PF05000.19, score=128.1]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=24.9]} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [RH, Score=2395, Expect=0.0]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [RH, Score=2395, Expect=0.0]} {Dmel: FBgn0003277, RpII215, RNA polymerase II 215kD subunit, [RH, Score=2326, Expect=0.0]} {Celegans: WBGene00000123, ama-1, DNA-directed RNA polymerase II subunit RPB1, [RH, Score=2301, Expect=0.0]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [RH, Score=2084, Expect=0.0]} {RNA1509_11421} {RNA1310_513.1} {RNA815_145} Mlig455_050572 {REF} {Length: 6351} {Pfam: RNA polymerase Rpb1, domain 1 [PF04997.14, score=362.1]; RNA polymerase Rpb1, domain 5 [PF04998.19, score=336.1]; RNA polymerase Rpb1, domain 2 [PF00623.22, score=244.2]; RNA polymerase Rpb1, domain 6 [PF04992.16, score=220.5]; RNA polymerase Rpb1, domain 3 [PF04983.20, score=172.8]; RNA polymerase Rpb1, domain 7 [PF04990.14, score=169.7]; RNA polymerase Rpb1, domain 4 [PF05000.19, score=128.1]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=24.1]} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [RH, Score=2395, Expect=0.0]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [RH, Score=2395, Expect=0.0]} {Dmel: FBgn0003277, RpII215, RNA polymerase II 215kD subunit, [RH, Score=2326, Expect=0.0]} {Celegans: WBGene00000123, ama-1, DNA-directed RNA polymerase II subunit RPB1, [RH, Score=2301, Expect=0.0]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [RH, Score=2084, Expect=0.0]} {RNA1509_11421} {RNA1310_513.1} {RNA815_145}
2.	MligTC455_37493	648	13.49	Mlig455_048659	Neo: Int S/G2/M Age: - Region-enriched R4: 2.285/0.00686 Region-enriched R5: 1.865/0.02221	TDRD9	0.952	-	-	-	0.952	-	-	Mlig455_048659 {REF} {Length: 5599} {Pfam: Tudor domain [PF00567.26, score=52.6]; Helicase conserved C-terminal domain [PF00271.33, score=42.9]; Helicase associated domain (HA2) [PF04408.25, score=31.1]; DEAD/DEAH box helicase [PF00270.31, score=30.6]} {Human: ENSG00000156414, TDRD9, tudor domain containing 9, [RH, Score=533, Expect=4e-163]} {Mouse: ENSMUSG00000054003, Tdrd9, tudor domain containing 9, [RH, Score=510, Expect=4e-155]} {Dmel: FBgn0003483, spn-E, spindle E, [RH, Score=508, Expect=5e-154]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [Score=241, Expect=3e-64]} {Smed: dd_Smed_v6_5842_0_1, dd_Smed_v6_5842_0_1, [RH, Score=657, Expect=0.0]} {RNA1509_2841} {RNA1310_750.1} {RNA815_310.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33347

1338

27.88

Mlig455_050565, Mlig455_050572

Neo: Int S/G2/M

Age: -

POLR2A

1.000

MligTC455_37493

648

13.49

Mlig455_048659

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.285/0.00686
Region-enriched R5: 1.865/0.02221

TDRD9

0.952

Mlig455_048659 {REF} {Length: 5599} {Pfam: Tudor domain [PF00567.26, score=52.6]; Helicase conserved C-terminal domain [PF00271.33, score=42.9]; Helicase associated domain (HA2) [PF04408.25, score=31.1]; DEAD/DEAH box helicase [PF00270.31, score=30.6]} {Human: ENSG00000156414, TDRD9, tudor domain containing 9, [RH, Score=533, Expect=4e-163]} {Mouse: ENSMUSG00000054003, Tdrd9, tudor domain containing 9, [RH, Score=510, Expect=4e-155]} {Dmel: FBgn0003483, spn-E, spindle E, [RH, Score=508, Expect=5e-154]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [Score=241, Expect=3e-64]} {Smed: dd_Smed_v6_5842_0_1, dd_Smed_v6_5842_0_1, [RH, Score=657, Expect=0.0]} {RNA1509_2841} {RNA1310_750.1} {RNA815_310.1}