TomoSeq data search

Data search

Results for MligTC455_33395

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33395	77	1.60	Mlig455_056194	Neo: - Age: logFC(26M/2M)=0.517	RASGRP3	Mlig455_056194 {REF} {Length: 5132} {Pfam: RasGEF domain [PF00617.21, score=142.8]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=52.3]} {Human: ENSG00000152689, RASGRP3, RAS guanyl releasing protein 3, [Score=431, Expect=2e-140]; ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [Score=415, Expect=2e-132]} {Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [Score=420, Expect=2e-136]; ENSMUSG00000027347, Rasgrp1, RAS guanyl releasing protein 1, [Score=408, Expect=2e-130]} {Dmel: FBgn0001965, Sos, Son of sevenless, [Score=88.6, Expect=1e-17]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=381, Expect=2e-122]} {Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [Score=249, Expect=8e-76]} {RNA1509_27913} {RNA1310_6536} {RNA815_19665}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33395

1.60

Mlig455_056194

Neo: -

Age: logFC(26M/2M)=0.517

RASGRP3

Mlig455_056194 {REF} {Length: 5132} {Pfam: RasGEF domain [PF00617.21, score=142.8]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=52.3]} {Human: ENSG00000152689, RASGRP3, RAS guanyl releasing protein 3, [Score=431, Expect=2e-140]; ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [Score=415, Expect=2e-132]} {Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [Score=420, Expect=2e-136]; ENSMUSG00000027347, Rasgrp1, RAS guanyl releasing protein 1, [Score=408, Expect=2e-130]} {Dmel: FBgn0001965, Sos, Son of sevenless, [Score=88.6, Expect=1e-17]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=381, Expect=2e-122]} {Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [Score=249, Expect=8e-76]} {RNA1509_27913} {RNA1310_6536} {RNA815_19665}

Cumulative graph for MligTC455_33395

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.472	1.711	0.05482	0.54590
RegionR2	0.657	1.711	0.68095	1.00000
RegionR3	2.007	1.711	0.04380	0.36531
RegionR4	3.319	1.711	0.01148	0.06774
RegionR5	1.302	1.711	0.21955	0.52108
RegionR6	1.468	1.711	0.17510	0.73549
RegionR7	-1.294	1.711	0.99572	1.00000
RegionR8	0.012	1.711	0.90683	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.262	1.711	0.99997	1.00000
RegenerationR2	-0.848	1.711	0.34742	0.78022
RegenerationR3	-3.419	1.711	0.00264	0.08977
RegenerationR4	-2.272	1.711	0.05397	0.37322
RegenerationR5	-1.356	1.711	0.18042	0.61022
RegenerationR6	-1.889	1.711	0.09753	0.38853
RegenerationBL	-6.018	1.711	0.01282	0.11637
RegenerationTP	-2.11	1.711	0.18858	0.62651

Genes with expression patterns similar to MligTC455_33395

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33395	77	1.6	Mlig455_056194	Neo: - Age: logFC(26M/2M)=0.517	RASGRP3	4	-	1.000	1.000	1.000	-	1.000	Mlig455_056194 {REF} {Length: 5132} {Pfam: RasGEF domain [PF00617.21, score=142.8]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=52.3]} {Human: ENSG00000152689, RASGRP3, RAS guanyl releasing protein 3, [Score=431, Expect=2e-140]; ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [Score=415, Expect=2e-132]} {Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [Score=420, Expect=2e-136]; ENSMUSG00000027347, Rasgrp1, RAS guanyl releasing protein 1, [Score=408, Expect=2e-130]} {Dmel: FBgn0001965, Sos, Son of sevenless, [Score=88.6, Expect=1e-17]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=381, Expect=2e-122]} {Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [Score=249, Expect=8e-76]} {RNA1509_27913} {RNA1310_6536} {RNA815_19665}
2.	MligTC455_32707	59	1.23	Mlig455_063054	Neo: - Age: logFC(26M/2M)=0.698	HERC4	0.96	-	-	-	-	-	0.960	Mlig455_063054 {REF} {Length: 3681} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=143.6]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=118.8]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [Score=97.4, Expect=3e-20]} {Mouse: ENSMUSG00000030839, Sergef, secretion regulating guanine nucleotide exchange factor, [RH, Score=105, Expect=1e-23]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=115, Expect=5e-26]} {Celegans: WBGene00017195, glo-4, X-linked retinitis pigmentosa GTPase regulator homolog, [RH, Score=95.5, Expect=5e-20]} {Smed: dd_Smed_v6_16647_0_1, dd_Smed_v6_16647_0_1, [RH, Score=132, Expect=4e-32]} {RNA1509_27199} {RNA1310_3241.1} {RNA815_13346}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33395

1.6

Mlig455_056194

Neo: -

Age: logFC(26M/2M)=0.517

RASGRP3

1.000

MligTC455_32707

1.23

Mlig455_063054

Neo: -

Age: logFC(26M/2M)=0.698

HERC4

0.96

0.960

Mlig455_063054 {REF} {Length: 3681} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=143.6]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=118.8]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [Score=97.4, Expect=3e-20]} {Mouse: ENSMUSG00000030839, Sergef, secretion regulating guanine nucleotide exchange factor, [RH, Score=105, Expect=1e-23]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=115, Expect=5e-26]} {Celegans: WBGene00017195, glo-4, X-linked retinitis pigmentosa GTPase regulator homolog, [RH, Score=95.5, Expect=5e-20]} {Smed: dd_Smed_v6_16647_0_1, dd_Smed_v6_16647_0_1, [RH, Score=132, Expect=4e-32]} {RNA1509_27199} {RNA1310_3241.1} {RNA815_13346}