TomoSeq data search

Data search

Results for MligTC455_33446

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33446	37	0.77	Mlig455_011107	Neo: - Age: -		Mlig455_011107 {REF} {Length: 4582} {TRANSSPLICED} {Pfam: Recombination endonuclease VII [PF02945.17, score=28.8]} {Celegans: WBGene00022511, ZC53.4, [Score=245, Expect=1e-66]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [RH, Score=528, Expect=1e-173]} {RNA1509_26772} {RNA1310_4650} {RNA815_12457}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_33446

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2	0.927	1.00000	1.00000
RegionR2	2.338	0.927	0.99981	1.00000
RegionR3	-0.322	0.927	0.99995	1.00000
RegionR4	-1.981	0.927	0.99953	1.00000
RegionR5	1.589	0.927	0.99993	1.00000
RegionR6	-0.153	0.927	1.00000	1.00000
RegionR7	2.191	0.927	0.99975	1.00000
RegionR8	-1.663	0.927	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.401	0.927	0.99998	1.00000
RegenerationR2	-2.182	0.927	0.00869	0.14867
RegenerationR3	-1.472	0.927	0.99994	1.00000
RegenerationR4	-0.311	0.927	0.99975	1.00000
RegenerationR5	-1.419	0.927	0.99970	1.00000
RegenerationR6	-1.289	0.927	0.99977	1.00000
RegenerationBL	-4.503	0.927	0.99978	1.00000
RegenerationTP	-0.473	0.927	1.00000	1.00000

Genes with expression patterns similar to MligTC455_33446

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33446	37	0.77	Mlig455_011107	Neo: - Age: -		2	-	-	1.000	-	1.000	-	Mlig455_011107 {REF} {Length: 4582} {TRANSSPLICED} {Pfam: Recombination endonuclease VII [PF02945.17, score=28.8]} {Celegans: WBGene00022511, ZC53.4, [Score=245, Expect=1e-66]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [RH, Score=528, Expect=1e-173]} {RNA1509_26772} {RNA1310_4650} {RNA815_12457}
2.	MligTC455_06296	39	0.82	Mlig455_013095	Neo: - Age: - Region-enriched R7: 5.530/0.00000	RDH12	0.966	-	-	0.966	-	-	-	Mlig455_013095 {REF} {Length: 2144} {Pfam: short chain dehydrogenase [PF00106.27, score=73.3]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=41.9]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=139, Expect=6e-38]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=137, Expect=4e-37]; ENSMUSG00000021123, Rdh12, retinol dehydrogenase 12, [Score=132, Expect=3e-35]} {Dmel: FBgn0033205, CG2064, [Score=133, Expect=7e-36]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=101, Expect=3e-24]} {Smed: dd_Smed_v6_2096_0_1, dd_Smed_v6_2096_0_1, [Score=118, Expect=2e-30]} {RNA1310_45617} {RNA815_47495}
3.	MligTC455_08865	151	3.15	Mlig455_056733	Neo: - Age: -	ALS2	0.953	-	-	0.953	-	-	-	Mlig455_056733 {REF} {Length: 7609} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=85.1]; MORN repeat [PF02493.22, score=79.5]; Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=45.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=38.0]} {Human: ENSG00000003393, ALS2, ALS2, alsin Rho guanine nucleotide exchange factor, [RH, Score=307, Expect=6e-84]} {Mouse: ENSMUSG00000026024, Als2, alsin Rho guanine nucleotide exchange factor, [RH, Score=315, Expect=2e-86]} {Dmel: FBgn0037116, Als2, Amyotrophic lateral sclerosis 2, [RH, Score=87.8, Expect=8e-17]} {Smed: dd_Smed_v6_12762_0_1, dd_Smed_v6_12762_0_1, [Score=73.9, Expect=6e-13]} {RNA1509_6929} {RNA1310_334.1, RNA1509_6929} {RNA1509_6929, RNA815_1754}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33446

0.77

Mlig455_011107

Neo: -

Age: -

1.000

MligTC455_06296

0.82

Mlig455_013095

Neo: -

Age: -

Region-enriched R7: 5.530/0.00000

RDH12

0.966

Mlig455_013095 {REF} {Length: 2144} {Pfam: short chain dehydrogenase [PF00106.27, score=73.3]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=41.9]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=139, Expect=6e-38]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=137, Expect=4e-37]; ENSMUSG00000021123, Rdh12, retinol dehydrogenase 12, [Score=132, Expect=3e-35]} {Dmel: FBgn0033205, CG2064, [Score=133, Expect=7e-36]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=101, Expect=3e-24]} {Smed: dd_Smed_v6_2096_0_1, dd_Smed_v6_2096_0_1, [Score=118, Expect=2e-30]} {RNA1310_45617} {RNA815_47495}

MligTC455_08865

151

3.15

Mlig455_056733

Neo: -

Age: -

ALS2

0.953

Mlig455_056733 {REF} {Length: 7609} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=85.1]; MORN repeat [PF02493.22, score=79.5]; Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=45.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=38.0]} {Human: ENSG00000003393, ALS2, ALS2, alsin Rho guanine nucleotide exchange factor, [RH, Score=307, Expect=6e-84]} {Mouse: ENSMUSG00000026024, Als2, alsin Rho guanine nucleotide exchange factor, [RH, Score=315, Expect=2e-86]} {Dmel: FBgn0037116, Als2, Amyotrophic lateral sclerosis 2, [RH, Score=87.8, Expect=8e-17]} {Smed: dd_Smed_v6_12762_0_1, dd_Smed_v6_12762_0_1, [Score=73.9, Expect=6e-13]} {RNA1509_6929} {RNA1310_334.1, RNA1509_6929} {RNA1509_6929, RNA815_1754}