TomoSeq data search

Data search

Results for MligTC455_33471

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33471	102	2.12	Mlig455_026619	Neo: - Age: -		Mlig455_026619 {REF} {Length: 5106} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_33471

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.716	1.601	0.36061	1.00000
RegionR2	1.361	1.601	0.30993	0.70095
RegionR3	-1.254	1.601	0.99867	1.00000
RegionR4	1.107	1.601	0.39129	0.71721
RegionR5	-0.914	1.601	1.00000	1.00000
RegionR6	0.185	1.601	0.71537	1.00000
RegionR7	1.546	1.601	0.25428	0.88085
RegionR8	2.685	1.601	0.13342	0.66856

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.601	1.601	0.55757	1.00000
RegenerationR2	-0.339	1.601	0.54533	0.89059
RegenerationR3	1.763	1.601	0.18187	0.61852
RegenerationR4	0.919	1.601	0.36226	0.78842
RegenerationR5	1.538	1.601	0.16404	0.58903
RegenerationR6	1.6	1.601	0.17662	0.51002
RegenerationBL	0.811	1.601	0.54718	0.90406
RegenerationTP	-0.586	1.601	0.57805	0.94835

Genes with expression patterns similar to MligTC455_33471

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33471	102	2.12	Mlig455_026619	Neo: - Age: -		3	-	-	1.000	1.000	1.000	-	Mlig455_026619 {REF} {Length: 5106} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1}
2.	MligTC455_53343	164	3.42	Mlig455_005711	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_005711 {REF} {Length: 2226} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=59.9]} {RNA1509_5566} {RNA1310_28834} {RNA815_8475}
3.	MligTC455_16895	508	10.58	Mlig455_020558, Mlig455_044511	Neo: - Age: Up-Down-Down Region-enriched R8: 4.020/0.00009 Region-enriched R7: 2.782/0.03064	FAT4	0.96	-	-	0.960	-	-	-	Mlig455_020558 {REF} {Length: 15261} {Pfam: Cadherin domain [PF00028.19, score=236.6]; EGF-like domain [PF00008.29, score=31.7]; Laminin G domain [PF02210.26, score=27.3]; Laminin G domain [PF00054.25, score=27.1]; Long Rib domain [PF18957.2, score=19.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=523, Expect=9e-151]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=509, Expect=1e-146]} {Dmel: FBgn0001075, ft, fat, [Score=503, Expect=2e-144]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=234, Expect=2e-61]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [Score=298, Expect=7e-81]} {RNA1509_19257} {RNA1310_36936, RNA1509_19257} {RNA1509_19257, RNA815_35431} Mlig455_044511 {REF} {Length: 14996} {Pfam: Cadherin domain [PF00028.19, score=1056.4]; Cadherin-like [PF16184.7, score=66.3]; Cadherin-like [PF08266.14, score=54.7]; EGF-like domain [PF00008.29, score=28.9]; Long Rib domain [PF18957.2, score=27.4]; Cadherin prodomain like [PF08758.13, score=26.9]; Laminin G domain [PF00054.25, score=22.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=1341, Expect=0.0]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=1291, Expect=0.0]} {Dmel: FBgn0001075, ft, fat, [Score=726, Expect=0.0]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=303, Expect=2e-81]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [Score=280, Expect=1e-74]} {RNA1509_19257, RNA1509_53071} {RNA1310_36936, RNA1509_53071} {RNA1509_53071, RNA815_35431}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33471

102

2.12

Mlig455_026619

Neo: -

Age: -

1.000

Mlig455_026619 {REF} {Length: 5106} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1}

MligTC455_53343

164

3.42

Mlig455_005711

Neo: -

Age: -

0.974

Mlig455_005711 {REF} {Length: 2226} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=59.9]} {RNA1509_5566} {RNA1310_28834} {RNA815_8475}

MligTC455_16895

508

10.58

Mlig455_020558, Mlig455_044511

Neo: -

Age: Up-Down-Down

Region-enriched R8: 4.020/0.00009
Region-enriched R7: 2.782/0.03064

FAT4

0.96

0.960

Mlig455_020558 {REF} {Length: 15261} {Pfam: Cadherin domain [PF00028.19, score=236.6]; EGF-like domain [PF00008.29, score=31.7]; Laminin G domain [PF02210.26, score=27.3]; Laminin G domain [PF00054.25, score=27.1]; Long Rib domain [PF18957.2, score=19.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=523, Expect=9e-151]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=509, Expect=1e-146]} {Dmel: FBgn0001075, ft, fat, [Score=503, Expect=2e-144]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=234, Expect=2e-61]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [Score=298, Expect=7e-81]} {RNA1509_19257} {RNA1310_36936, RNA1509_19257} {RNA1509_19257, RNA815_35431}

Mlig455_044511 {REF} {Length: 14996} {Pfam: Cadherin domain [PF00028.19, score=1056.4]; Cadherin-like [PF16184.7, score=66.3]; Cadherin-like [PF08266.14, score=54.7]; EGF-like domain [PF00008.29, score=28.9]; Long Rib domain [PF18957.2, score=27.4]; Cadherin prodomain like [PF08758.13, score=26.9]; Laminin G domain [PF00054.25, score=22.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=1341, Expect=0.0]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=1291, Expect=0.0]} {Dmel: FBgn0001075, ft, fat, [Score=726, Expect=0.0]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=303, Expect=2e-81]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [Score=280, Expect=1e-74]} {RNA1509_19257, RNA1509_53071} {RNA1310_36936, RNA1509_53071} {RNA1509_53071, RNA815_35431}