Data search


search
Exact
Search

Results for MligTC455_33480

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33480 38 0.80 Mlig455_049651

Neo: -

Age: -

Mlig455_049651 {REF} {Length: 1552} {RNA1509_54932} {RNA1310_329} {RNA815_359}

Cumulative graph for MligTC455_33480

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.75 1.318 1.00000 1.00000
RegionR2 2.522 1.318 0.08824 0.36490
RegionR3 1.499 1.318 0.24622 0.78956
RegionR4 1.918 1.318 0.16269 0.42168
RegionR5 0.747 1.318 0.47702 0.84044
RegionR6 1.988 1.318 0.13386 0.65800
RegionR7 -2.955 1.318 1.00000 1.00000
RegionR8 -2.969 1.318 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.174 1.318 1.00000 1.00000
RegenerationR2 -0.634 1.318 0.38452 0.80467
RegenerationR3 0.587 1.318 0.54096 0.87820
RegenerationR4 -0.297 1.318 0.77672 0.97916
RegenerationR5 0.657 1.318 0.47499 0.84413
RegenerationR6 -4.373 1.318 0.00529 0.08784
RegenerationBL -1.491 1.318 0.99977 1.00000
RegenerationTP 3.584 1.318 0.18601 0.62291


Genes with expression patterns similar to MligTC455_33480

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33480 38 0.8 Mlig455_049651

Neo: -

Age: -

4 1.000 - 1.000 - 1.000 1.000 Mlig455_049651 {REF} {Length: 1552} {RNA1509_54932} {RNA1310_329} {RNA815_359}
2. MligTC455_30569 28 0.58 Mlig455_016003

Neo: -

Age: -

Region-enriched R7: 4.707/0.01972
Region-enriched R2: 3.988/0.03045

0.962 - - - - 0.962 - Mlig455_016003 {REF} {Length: 5177} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=107.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=106.9]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=146, Expect=2e-42]} {RNA1509_27182, RNA1509_8906} {RNA1310_1712.3, RNA1509_27182} {RNA1509_27182, RNA815_474.1}
3. MligTC455_12960 15 0.32 Mlig455_055122

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_055122 {REF} {Length: 2179} {Celegans: WBGene00016348, C33E10.6, [Score=77.8, Expect=8e-17]} {RNA1509_37388} {RNA1310_436.1} {RNA815_1671.1}
4. MligTC455_25191 15 0.31 Mlig455_005747

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_005747 {REF} {Length: 288} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7522} {RNA1310_3662} {RNA815_24199}
5. MligTC455_33459 43 0.9 Mlig455_022503

Neo: -

Age: logFC(26M/2M)=-0.452

Regeneration-upregulated R2: 5.479

Regeneration-enriched R2: 5.479

0.954 - - - - 0.954 - Mlig455_022503 {REF} {Length: 4908} {RNA1509_14303} {RNA1310_9485} {RNA815_2709}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA