TomoSeq data search

Data search

Results for MligTC455_33494

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33494	4086	85.13	Mlig455_024345, Mlig455_024462	Neo: - Age: logFC(26M/2M)=0.210	TMED2	Mlig455_024345 {REF} {Length: 1877} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=175.5]} {Human: ENSG00000086598, TMED2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=5e-109]} {Mouse: ENSMUSG00000029390, Tmed2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=3e-109]} {Dmel: FBgn0029709, CHOp24, [RH, Score=243, Expect=2e-82]} {Celegans: WBGene00004766, sel-9, Suppressor/enhancer of lin-12 protein 9, [RH, Score=276, Expect=1e-95]} {Smed: dd_Smed_v6_2314_0_1, dd_Smed_v6_2314_0_1, [RH, Score=304, Expect=2e-106]} {RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_29589, RNA1509_48485} {RNA1310_24583, RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_48485} {RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_48485, RNA815_10717} Mlig455_024462 {REF} {Length: 2216} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=175.5]} {Human: ENSG00000086598, TMED2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=5e-109]} {Mouse: ENSMUSG00000029390, Tmed2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=3e-109]} {Dmel: FBgn0029709, CHOp24, [RH, Score=243, Expect=2e-82]} {Celegans: WBGene00004766, sel-9, Suppressor/enhancer of lin-12 protein 9, [RH, Score=276, Expect=1e-95]} {Smed: dd_Smed_v6_2314_0_1, dd_Smed_v6_2314_0_1, [RH, Score=304, Expect=2e-106]} {RNA1509_29589} {RNA1310_24583, RNA1509_29589} {RNA1509_29589, RNA815_10717}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33494

4086

85.13

Mlig455_024345, Mlig455_024462

Neo: -

Age: logFC(26M/2M)=0.210

TMED2

Mlig455_024345 {REF} {Length: 1877} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=175.5]} {Human: ENSG00000086598, TMED2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=5e-109]} {Mouse: ENSMUSG00000029390, Tmed2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=3e-109]} {Dmel: FBgn0029709, CHOp24, [RH, Score=243, Expect=2e-82]} {Celegans: WBGene00004766, sel-9, Suppressor/enhancer of lin-12 protein 9, [RH, Score=276, Expect=1e-95]} {Smed: dd_Smed_v6_2314_0_1, dd_Smed_v6_2314_0_1, [RH, Score=304, Expect=2e-106]} {RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_29589, RNA1509_48485} {RNA1310_24583, RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_48485} {RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_48485, RNA815_10717}

Mlig455_024462 {REF} {Length: 2216} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=175.5]} {Human: ENSG00000086598, TMED2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=5e-109]} {Mouse: ENSMUSG00000029390, Tmed2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=3e-109]} {Dmel: FBgn0029709, CHOp24, [RH, Score=243, Expect=2e-82]} {Celegans: WBGene00004766, sel-9, Suppressor/enhancer of lin-12 protein 9, [RH, Score=276, Expect=1e-95]} {Smed: dd_Smed_v6_2314_0_1, dd_Smed_v6_2314_0_1, [RH, Score=304, Expect=2e-106]} {RNA1509_29589} {RNA1310_24583, RNA1509_29589} {RNA1509_29589, RNA815_10717}

Cumulative graph for MligTC455_33494

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.204	6.601	0.72673	1.00000
RegionR2	-0.424	6.601	0.29646	0.68503
RegionR3	-0.187	6.601	0.58489	1.00000
RegionR4	-0.229	6.601	0.54880	0.86991
RegionR5	0.471	6.601	0.12294	0.35230
RegionR6	-0.066	6.601	0.84389	1.00000
RegionR7	0.582	6.601	0.06888	0.50497
RegionR8	0.058	6.601	0.88703	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.506	6.601	0.55626	1.00000
RegenerationR2	-0.082	6.601	0.83990	1.00000
RegenerationR3	-0.139	6.601	0.74191	0.96149
RegenerationR4	-0.16	6.601	0.71346	0.95847
RegenerationR5	-0.275	6.601	0.50111	0.85905
RegenerationR6	-0.681	6.601	0.10890	0.40834
RegenerationBL	0.067	6.601	0.85907	1.00000
RegenerationTP	-0.115	6.601	0.78645	1.00000

Genes with expression patterns similar to MligTC455_33494

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33494	4086	85.13	Mlig455_024345, Mlig455_024462	Neo: - Age: logFC(26M/2M)=0.210	TMED2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024345 {REF} {Length: 1877} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=175.5]} {Human: ENSG00000086598, TMED2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=5e-109]} {Mouse: ENSMUSG00000029390, Tmed2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=3e-109]} {Dmel: FBgn0029709, CHOp24, [RH, Score=243, Expect=2e-82]} {Celegans: WBGene00004766, sel-9, Suppressor/enhancer of lin-12 protein 9, [RH, Score=276, Expect=1e-95]} {Smed: dd_Smed_v6_2314_0_1, dd_Smed_v6_2314_0_1, [RH, Score=304, Expect=2e-106]} {RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_29589, RNA1509_48485} {RNA1310_24583, RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_48485} {RNA1509_12938, RNA1509_15211, RNA1509_19529, RNA1509_48485, RNA815_10717} Mlig455_024462 {REF} {Length: 2216} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=175.5]} {Human: ENSG00000086598, TMED2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=5e-109]} {Mouse: ENSMUSG00000029390, Tmed2, transmembrane p24 trafficking protein 2, [RH, Score=311, Expect=3e-109]} {Dmel: FBgn0029709, CHOp24, [RH, Score=243, Expect=2e-82]} {Celegans: WBGene00004766, sel-9, Suppressor/enhancer of lin-12 protein 9, [RH, Score=276, Expect=1e-95]} {Smed: dd_Smed_v6_2314_0_1, dd_Smed_v6_2314_0_1, [RH, Score=304, Expect=2e-106]} {RNA1509_29589} {RNA1310_24583, RNA1509_29589} {RNA1509_29589, RNA815_10717}
2.	MligTC455_50670	1021	21.27	Mlig455_026568	Neo: Int S/G2/M Age: - Region-enriched R5: 1.125/0.03562	SF3A2	0.953	-	-	-	-	-	0.953	Mlig455_026568 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) [PF16835.7, score=127.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.7]; Cactus-binding C-terminus of cactin protein [PF09732.11, score=19.2]} {Human: ENSG00000104897, SF3A2, splicing factor 3a subunit 2, [RH, Score=355, Expect=1e-120]} {Mouse: ENSMUSG00000020211, Sf3a2, splicing factor 3a, subunit 2, [Score=355, Expect=3e-120]} {Dmel: FBgn0036314, Sf3a2, Splicing factor 3a subunit 2, [RH, Score=377, Expect=1e-132]} {Celegans: WBGene00008683, repo-1, REversed POlarity in early embryos, [RH, Score=361, Expect=5e-127]} {Smed: dd_Smed_v6_1788_0_1, dd_Smed_v6_1788_0_1, [RH, Score=372, Expect=5e-130]} {RNA1509_34887, RNA1509_9978} {RNA1310_38332.1, RNA1509_34887} {RNA1509_34887, RNA815_9802}
3.	MligTC455_11849	277	5.77	Mlig455_026098	Neo: Int S/G2/M Age: Up-Down-Down	ANAPC1	0.95	-	-	-	-	-	0.950	Mlig455_026098 {REF} {Length: 8230} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 1 [PF12859.9, score=22.7]} {Human: ENSG00000153107, ANAPC1, anaphase promoting complex subunit 1, [RH, Score=204, Expect=5e-52]} {Mouse: ENSMUSG00000014355, Anapc1, anaphase promoting complex subunit 1, [RH, Score=206, Expect=2e-52]} {Dmel: FBgn0004391, shtd, shattered, [RH, Score=214, Expect=3e-55]} {Celegans: WBGene00003133, mat-2, Anaphase-promoting complex subunit 1, [Score=178, Expect=2e-44]} {Smed: dd_Smed_v6_8329_0_1, dd_Smed_v6_8329_0_1, [Score=165, Expect=1e-41]} {RNA1509_37581, RNA1509_9751} {RNA1310_441.1, RNA1509_37581} {RNA1509_37581, RNA815_441.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33494

4086

85.13

Mlig455_024345, Mlig455_024462

Neo: -

Age: logFC(26M/2M)=0.210

TMED2

1.000

MligTC455_50670

1021

21.27

Mlig455_026568

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.125/0.03562

SF3A2

0.953

Mlig455_026568 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) [PF16835.7, score=127.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.7]; Cactus-binding C-terminus of cactin protein [PF09732.11, score=19.2]} {Human: ENSG00000104897, SF3A2, splicing factor 3a subunit 2, [RH, Score=355, Expect=1e-120]} {Mouse: ENSMUSG00000020211, Sf3a2, splicing factor 3a, subunit 2, [Score=355, Expect=3e-120]} {Dmel: FBgn0036314, Sf3a2, Splicing factor 3a subunit 2, [RH, Score=377, Expect=1e-132]} {Celegans: WBGene00008683, repo-1, REversed POlarity in early embryos, [RH, Score=361, Expect=5e-127]} {Smed: dd_Smed_v6_1788_0_1, dd_Smed_v6_1788_0_1, [RH, Score=372, Expect=5e-130]} {RNA1509_34887, RNA1509_9978} {RNA1310_38332.1, RNA1509_34887} {RNA1509_34887, RNA815_9802}

MligTC455_11849

277

5.77

Mlig455_026098

Neo: Int S/G2/M

Age: Up-Down-Down

ANAPC1

0.95

0.950

Mlig455_026098 {REF} {Length: 8230} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 1 [PF12859.9, score=22.7]} {Human: ENSG00000153107, ANAPC1, anaphase promoting complex subunit 1, [RH, Score=204, Expect=5e-52]} {Mouse: ENSMUSG00000014355, Anapc1, anaphase promoting complex subunit 1, [RH, Score=206, Expect=2e-52]} {Dmel: FBgn0004391, shtd, shattered, [RH, Score=214, Expect=3e-55]} {Celegans: WBGene00003133, mat-2, Anaphase-promoting complex subunit 1, [Score=178, Expect=2e-44]} {Smed: dd_Smed_v6_8329_0_1, dd_Smed_v6_8329_0_1, [Score=165, Expect=1e-41]} {RNA1509_37581, RNA1509_9751} {RNA1310_441.1, RNA1509_37581} {RNA1509_37581, RNA815_441.1}