Data search
Results for MligTC455_33600
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33600 | 691 | 14.40 | Mlig455_042517 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.274 Region-enriched R5: 1.209/0.01513 |
VLDLR | Mlig455_042517 {REF} {Length: 4331} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=101.3]; Low-density lipoprotein receptor repeat class B [PF00058.19, score=36.9]; Coagulation Factor Xa inhibitory site [PF14670.8, score=21.3]} {Human: ENSG00000147852, VLDLR, very low density lipoprotein receptor, [RH, Score=225, Expect=1e-61]} {Mouse: ENSMUSG00000024924, Vldlr, very low density lipoprotein receptor, [RH, Score=229, Expect=1e-63]} {Dmel: FBgn0051092, LpR2, Lipophorin receptor 2, [RH, Score=221, Expect=6e-60]} {Celegans: WBGene00003071, lrp-1, Low-density lipoprotein receptor-related protein, [RH, Score=186, Expect=4e-48]} {Smed: dd_Smed_v6_9829_0_1, dd_Smed_v6_9829_0_1, [RH, Score=179, Expect=1e-46]} {RNA1509_31532, RNA1509_40479, RNA1509_54905, RNA1509_6987} {RNA1310_5652.1, RNA1509_31532, RNA1509_40479, RNA1509_54905, RNA1509_6987} {RNA1509_31532, RNA1509_40479, RNA1509_54905, RNA1509_6987, RNA815_19293} |
Cumulative graph for MligTC455_33600
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.896 | 4.234 | 0.18331 | 0.81311 | |
| RegionR2 | 1.395 | 4.234 | 0.01178 | 0.11153 | |
| RegionR3 | 0.447 | 4.234 | 0.33319 | 0.87118 | |
| RegionR4 | -0.494 | 4.234 | 0.37245 | 0.69595 | |
| RegionR5 | 1.209 | 4.234 | 0.00166 | 0.01513 | |
| RegionR6 | 0.01 | 4.234 | 0.98011 | 1.00000 | |
| RegionR7 | -0.254 | 4.234 | 0.66891 | 1.00000 | |
| RegionR8 | -0.416 | 4.234 | 0.56118 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.014 | 4.234 | 0.37224 | 1.00000 | |
| RegenerationR2 | -0.103 | 4.234 | 0.81408 | 0.99411 | |
| RegenerationR3 | -0.363 | 4.234 | 0.47513 | 0.84702 | |
| RegenerationR4 | 0.003 | 4.234 | 0.99685 | 1.00000 | |
| RegenerationR5 | -0.671 | 4.234 | 0.14444 | 0.55959 | |
| RegenerationR6 | 0.502 | 4.234 | 0.33039 | 0.67677 | |
| RegenerationBL | 0.627 | 4.234 | 0.27888 | 0.63969 | |
| RegenerationTP | 0.201 | 4.234 | 0.76745 | 1.00000 |
Genes with expression patterns similar to MligTC455_33600
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33600 | 691 | 14.4 | Mlig455_042517 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.274 Region-enriched R5: 1.209/0.01513 |
VLDLR | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042517 {REF} {Length: 4331} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=101.3]; Low-density lipoprotein receptor repeat class B [PF00058.19, score=36.9]; Coagulation Factor Xa inhibitory site [PF14670.8, score=21.3]} {Human: ENSG00000147852, VLDLR, very low density lipoprotein receptor, [RH, Score=225, Expect=1e-61]} {Mouse: ENSMUSG00000024924, Vldlr, very low density lipoprotein receptor, [RH, Score=229, Expect=1e-63]} {Dmel: FBgn0051092, LpR2, Lipophorin receptor 2, [RH, Score=221, Expect=6e-60]} {Celegans: WBGene00003071, lrp-1, Low-density lipoprotein receptor-related protein, [RH, Score=186, Expect=4e-48]} {Smed: dd_Smed_v6_9829_0_1, dd_Smed_v6_9829_0_1, [RH, Score=179, Expect=1e-46]} {RNA1509_31532, RNA1509_40479, RNA1509_54905, RNA1509_6987} {RNA1310_5652.1, RNA1509_31532, RNA1509_40479, RNA1509_54905, RNA1509_6987} {RNA1509_31532, RNA1509_40479, RNA1509_54905, RNA1509_6987, RNA815_19293} |
| 2. | MligTC455_16412 | 403 | 8.39 | Mlig455_048929, Mlig455_048953 | Neo: - Age: Down-Up-Up |
MAP3K2 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_048929 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=216.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.9]; Kinase-like [PF14531.8, score=28.8]; Fungal protein kinase [PF17667.3, score=20.0]; ABC1 atypical kinase-like domain [PF03109.18, score=18.7]} {Human: ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [Score=238, Expect=3e-71]; ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [Score=234, Expect=3e-69]} {Mouse: ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [Score=241, Expect=2e-72]; ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [Score=233, Expect=3e-69]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=161, Expect=3e-42]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=167, Expect=3e-45]} {Smed: dd_Smed_v6_6304_0_1, dd_Smed_v6_6304_0_1, [RH, Score=177, Expect=2e-52]} {RNA1509_12704} {RNA1310_14266} {RNA815_4624.1} Mlig455_048953 {REF} {Length: 2666} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=217.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=150.2]; Kinase-like [PF14531.8, score=30.6]; Fungal protein kinase [PF17667.3, score=20.1]; ABC1 atypical kinase-like domain [PF03109.18, score=19.0]} {Human: ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [Score=238, Expect=2e-71]; ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [Score=233, Expect=1e-69]} {Mouse: ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [Score=241, Expect=8e-73]; ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [Score=232, Expect=2e-69]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=162, Expect=1e-42]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=169, Expect=2e-45]} {Smed: dd_Smed_v6_6304_0_1, dd_Smed_v6_6304_0_1, [RH, Score=177, Expect=9e-53]} {RNA1509_12704} {RNA1310_14266} {RNA815_4624.1} |
| 3. | MligTC455_48189 | 536 | 11.16 | Mlig455_007734 | Neo: - Age: - |
PPP1R2 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_007734 {REF} {Length: 2258} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=104.9]} {Human: ENSG00000184203, PPP1R2, protein phosphatase 1 regulatory inhibitor subunit 2, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000047714, Ppp1r2, protein phosphatase 1, regulatory inhibitor subunit 2, [Score=84.7, Expect=1e-19]} {Dmel: FBgn0028429, I-2, Inhibitor-2, [Score=65.1, Expect=4e-12]} {Celegans: WBGene00021312, szy-2, Suppressor of ZYg-1, [Score=72.4, Expect=2e-15]} {Smed: dd_Smed_v6_5135_0_1, dd_Smed_v6_5135_0_1, [Score=72.8, Expect=7e-16]} {RNA1509_27567, RNA1509_46923} {RNA1310_20344.1, RNA1509_27567} {RNA1509_27567, RNA815_19047} |
| 4. | MligTC455_39528 | 591 | 12.31 | Mlig455_049163, Mlig455_049217 | Neo: - Age: - |
0.954 | - | - | 0.954 | - | - | - | Mlig455_049163 {REF} {Length: 5965} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=21.2]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [RH, Score=86.7, Expect=3e-17]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=77.4, Expect=7e-15]} {RNA1509_16307, RNA1509_35835} {RNA1310_16246, RNA1509_35835} {RNA1509_35835, RNA815_30311} Mlig455_049217 {REF} {Length: 3811} {Pfam: Autophagy-related protein 13 [PF10033.11, score=19.4]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [RH, Score=90.5, Expect=5e-19]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=82.0, Expect=1e-16]} {RNA1509_16307, RNA1509_18281, RNA1509_37438} {RNA1310_16246, RNA1509_18281, RNA1509_37438} {RNA1509_18281, RNA1509_37438, RNA815_25828} |
|
| 5. | MligTC455_29220 | 298 | 6.21 | Mlig455_053072 | Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.724 Region-enriched R2: 2.616/0.03046 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_053072 {REF} {Length: 8981} {Pfam: Helix-turn-helix [PF01381.24, score=36.9]; Kinetoplastid membrane protein 11 [PF03037.18, score=27.5]; Family of unknown function (DUF6374) [PF19901.1, score=26.8]; Domain of unknown function (DUF5053) [PF16476.7, score=26.7]; Maf N-terminal region [PF08383.13, score=19.4]} {RNA1509_50040} {RNA1310_688} {RNA815_433.1} | |
| 6. | MligTC455_28546 | 318 | 6.62 | Mlig455_023253 | Neo: - Age: logFC(26M/2M)=-0.465 |
0.95 | - | - | 0.950 | - | - | - | Mlig455_023253 {REF} {Length: 9638} {Pfam: Ubiquitin family [PF00240.25, score=94.2]; WXG100 protein secretion system (Wss), protein YukD [PF08817.12, score=27.4]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=23.5]} {RNA1509_4245} {RNA1310_386} {RNA815_143.1} |