TomoSeq data search

Data search

Results for MligTC455_33646

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33646	543	11.31	Mlig455_051666	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.295	RBBP6	Mlig455_051666 {REF} {Length: 5325} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=60.2]; Zinc knuckle [PF13696.8, score=30.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [RH, Score=209, Expect=8e-54]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [RH, Score=204, Expect=2e-52]} {Dmel: FBgn0086129, snama, something that sticks like glue, [RH, Score=140, Expect=3e-33]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [RH, Score=142, Expect=7e-34]} {Smed: dd_Smed_v6_3780_0_2, dd_Smed_v6_3780_0_2, [RH, Score=221, Expect=4e-59]} {RNA1509_36695} {RNA1310_5249, RNA1509_36695} {RNA1509_36695, RNA815_11810}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33646

543

11.31

Mlig455_051666

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.295

RBBP6

Mlig455_051666 {REF} {Length: 5325} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=60.2]; Zinc knuckle [PF13696.8, score=30.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [RH, Score=209, Expect=8e-54]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [RH, Score=204, Expect=2e-52]} {Dmel: FBgn0086129, snama, something that sticks like glue, [RH, Score=140, Expect=3e-33]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [RH, Score=142, Expect=7e-34]} {Smed: dd_Smed_v6_3780_0_2, dd_Smed_v6_3780_0_2, [RH, Score=221, Expect=4e-59]} {RNA1509_36695} {RNA1310_5249, RNA1509_36695} {RNA1509_36695, RNA815_11810}

Cumulative graph for MligTC455_33646

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.207	3.575	0.32892	0.97590
RegionR2	0.128	3.575	0.82159	1.00000
RegionR3	0.193	3.575	0.65444	1.00000
RegionR4	-0.808	3.575	0.08565	0.27719
RegionR5	0.531	3.575	0.14778	0.39907
RegionR6	0.269	3.575	0.55400	1.00000
RegionR7	0.594	3.575	0.31046	0.94458
RegionR8	0.301	3.575	0.69281	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.529	3.575	0.06125	0.73006
RegenerationR2	0.956	3.575	0.02499	0.26092
RegenerationR3	0.942	3.575	0.04103	0.35543
RegenerationR4	1.118	3.575	0.01505	0.19215
RegenerationR5	0.638	3.575	0.10924	0.49971
RegenerationR6	1.103	3.575	0.01860	0.16826
RegenerationBL	0.72	3.575	0.18907	0.52209
RegenerationTP	0.631	3.575	0.29935	0.74476

Genes with expression patterns similar to MligTC455_33646

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33646	543	11.31	Mlig455_051666	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.295	RBBP6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_051666 {REF} {Length: 5325} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=60.2]; Zinc knuckle [PF13696.8, score=30.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [RH, Score=209, Expect=8e-54]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [RH, Score=204, Expect=2e-52]} {Dmel: FBgn0086129, snama, something that sticks like glue, [RH, Score=140, Expect=3e-33]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [RH, Score=142, Expect=7e-34]} {Smed: dd_Smed_v6_3780_0_2, dd_Smed_v6_3780_0_2, [RH, Score=221, Expect=4e-59]} {RNA1509_36695} {RNA1310_5249, RNA1509_36695} {RNA1509_36695, RNA815_11810}
2.	MligTC455_14048	145	3.01	Mlig455_004220	Neo: - Age: Down-Up-Down		0.961	-	-	-	-	0.961	-	Mlig455_004220 {REF} {Length: 2018} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=62.1]} {Smed: dd_Smed_v6_3452_0_1, dd_Smed_v6_3452_0_1, [Score=64.3, Expect=2e-13]} {RNA1509_55487} {RNA1310_21567.1} {RNA815_8794.1}
3.	MligTC455_25450	114	2.38	Mlig455_016972	Neo: - Age: Down-Up-Down		0.954	-	-	-	-	0.954	-	Mlig455_016972 {REF} {Length: 4463} {RNA1509_45158} {RNA1310_11367} {RNA815_3706}
4.	MligTC455_32924	623	12.99	Mlig455_067107	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.788 Region-enriched R5: 1.375/0.00015	H1FOO	0.95	-	-	-	0.950	-	-	Mlig455_067107 {REF} {Length: 1068} {Pfam: linker histone H1 and H5 family [PF00538.21, score=93.3]} {Human: ENSG00000178804, H1FOO, H1 histone family member O oocyte specific, [RH, Score=70.5, Expect=1e-13]} {Mouse: ENSMUSG00000042279, H1foo, H1 histone family, member O, oocyte-specific, [Score=62.8, Expect=2e-11]} {Dmel: FBgn0051617, His1:CG31617, [RH, Score=91.3, Expect=7e-22]} {Celegans: WBGene00001853, hil-2, Histone H1.2, [Score=66.6, Expect=2e-13]} {Smed: dd_Smed_v6_601_0_1, dd_Smed_v6_601_0_1, [RH, Score=116, Expect=5e-32]} {RNA1509_28942, RNA1509_35744, RNA1509_40195} {RNA1310_35964, RNA1509_28942, RNA1509_35744, RNA1509_40195} {RNA1509_28942, RNA1509_35744, RNA1509_40195, RNA815_16249}