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Results for MligTC455_33743

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33743 94 1.97 Mlig455_053729

Neo: -

Age: -

Region-specific R4: 5.595

Region-enriched R4: 5.046/0.00000

 Mlig455_053729 {REF} {Length: 700} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_34764} {RNA1310_47403, RNA1509_34764} {RNA1509_34764, RNA815_26663}

Cumulative graph for MligTC455_33743

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.462 2.271 0.66059 1.00000
RegionR2 0.158 2.271 0.99326 1.00000
RegionR3 0.642 2.271 0.43885 0.95600
RegionR4 5.046 2.271 0.00000 0.00000 Specific for R4: 5.595
RegionR5 -2.93 2.271 0.04927 0.18554
RegionR6 -0.457 2.271 0.83418 1.00000
RegionR7 -1.293 2.271 0.44478 1.00000
RegionR8 0.296 2.271 0.90922 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.137 2.271 0.44690 1.00000
RegenerationR2 -0.379 2.271 0.67841 0.94836
RegenerationR3 -1.073 2.271 0.27270 0.70700
RegenerationR4 -2.222 2.271 0.01093 0.15919
RegenerationR5 2.399 2.271 0.12709 0.53148
RegenerationR6 -1.521 2.271 0.23445 0.58203
RegenerationBL -2.573 2.271 0.30922 0.67463
RegenerationTP -0.088 2.271 0.89186 1.00000


Genes with expression patterns similar to MligTC455_33743

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33743 94 1.97 Mlig455_053729

Neo: -

Age: -

Region-specific R4: 5.595

Region-enriched R4: 5.046/0.00000

 5 1.000 1.000 1.000 1.000 - 1.000 Mlig455_053729 {REF} {Length: 700} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_34764} {RNA1310_47403, RNA1509_34764} {RNA1509_34764, RNA815_26663}
2. MligTC455_08379 159 3.31 Mlig455_046510

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.213

Region-enriched R4: 4.140/0.00040

 4.704 0.942 0.968 0.975 0.872 - 0.947 Mlig455_046510 {REF} {Length: 1253} {RNA1509_53827} {RNA1310_28934.2, RNA1509_53827} {RNA1509_53827, RNA815_14696.1}
3. MligTC455_28938 81 1.68 Mlig455_010206

Neo: Irradiation

Age: -

Region-specific R4: 6.354

Region-enriched R4: 4.718/0.00014

 4.692 0.984 0.961 0.953 0.848 - 0.946 Mlig455_010206 {REF} {Length: 3053} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=32.0]} {RNA1509_18466} {RNA1310_16470.2} {RNA815_4608.1}
4. MligTC455_13585 510 10.62 Mlig455_025444, Mlig455_025451

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.403

Region-specific R4: 5.989

Region-enriched R4: 3.044/0.00000

 4.685 0.985 0.969 0.937 0.853 - 0.941

Mlig455_025444 {REF} {Length: 1962} {RNA1509_37933, RNA1509_8059} {RNA1310_20766, RNA1509_37933} {RNA1509_37933, RNA815_5932}

Mlig455_025451 {REF} {Length: 1994} {RNA1509_37683, RNA1509_8059} {RNA1310_20766, RNA1509_37683, RNA1509_8059} {RNA1509_37683, RNA1509_8059, RNA815_5932}
5. MligTC455_06664 63 1.32 Mlig455_010697, Mlig455_010802

Neo: -

Age: Up-Down-Down

 4.677 0.969 0.934 0.909 0.903 - 0.962

Mlig455_010697 {REF} {Length: 438} {Mouse: ENSMUSG00000068078, 2310034C09Rik, RIKEN cDNA 2310034C09 gene, [RH, Score=45.4, Expect=1e-06]} {RNA1509_55894}

Mlig455_010802 {REF} {Length: 505} {NoTransDecoderORF} {RNA1509_55894}
6. MligTC455_08380 144 3 Mlig455_046612

Neo: -

Age: -

Region-specific R4: 7.560

Region-enriched R4: 4.596/0.00000

 4.665 0.934 0.958 0.962 0.858 - 0.953 Mlig455_046612 {REF} {Length: 557} {RNA1509_53827} {RNA1310_28934.3} {RNA815_35228}
7. MligTC455_08888 136 2.84 Mlig455_035306

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.207

Region-enriched R4: 3.001/0.00161

 4.655 0.994 0.916 0.979 0.848 - 0.918 Mlig455_035306 {REF} {Length: 2433} {TRANSSPLICED} {RNA1509_42078, RNA1509_58670} {RNA1310_23904, RNA1509_58670} {RNA1509_58670, RNA815_15639}
8. MligTC455_09759 159 3.3 Mlig455_006343, Mlig455_029226, Mlig455_031269, Mlig455_066439

Neo: Germline

Age: -

 4.653 0.909 0.930 0.991 0.874 - 0.949

Mlig455_006343 {REF} {Length: 317} {NoTransDecoderORF} {RNA1509_46642} {RNA1310_28160} {RNA815_23085.1}

Mlig455_029226 {REF} {Length: 184} {NoTransDecoderORF} {RNA1509_46642} {RNA1310_7864} {RNA815_26226.2}

Mlig455_031269 {REF} {Length: 263} {NoTransDecoderORF} {RNA1509_46642} {RNA1310_7864} {RNA815_26226.2}

Mlig455_066439 {REF} {Length: 231} {NoTransDecoderORF} {RNA1509_46642} {RNA1310_7864} {RNA815_26226.2}
9. MligTC455_38830 90 1.88 Mlig455_021409

Neo: -

Age: -

Region-specific R4: 7.006

Region-enriched R4: 5.412/0.00000

 4.651 0.981 0.957 0.960 0.868 - 0.885 Mlig455_021409 {REF} {Length: 1852} {RNA1509_16911, RNA1509_4330} {RNA1310_25585, RNA1509_16911} {RNA1509_16911, RNA815_10980}
10. MligTC455_07817 87 1.81 Mlig455_008042

Neo: Germline

Age: -

 4.636 0.950 0.894 0.986 0.852 - 0.954 Mlig455_008042 {REF} {Length: 1040} {RNA1509_56901} {RNA1310_38278} {RNA815_20254}
11. MligTC455_52221 362 7.54 Mlig455_019099

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.506

Region-enriched R4: 3.707/0.00000

 4.629 0.866 0.974 0.992 0.939 - 0.858 Mlig455_019099 {REF} {Length: 1017} {RNA1509_15451} {RNA1310_25391.1, RNA1509_15451} {RNA1509_15451, RNA815_27743}
12. MligTC455_08723 144 3.01 Mlig455_069185

Neo: Germline

Age: Up-Down-Down

 4.626 0.882 0.962 0.935 0.888 - 0.959 Mlig455_069185 {REF} {Length: 874} {RNA1509_27427, RNA1509_32031} {RNA1310_46334, RNA1509_32031} {RNA1509_32031, RNA815_23244}
13. MligTC455_20107 225 4.68 Mlig455_005578

Neo: Germline

Age: -

Region-specific R4: 6.149

Region-enriched R4: 4.181/0.00006

 4.624 0.980 0.931 0.968 0.874 - 0.871 Mlig455_005578 {REF} {Length: 858} {RNA1509_59132, RNA1509_9647} {RNA1310_44291, RNA1509_59132} {RNA1509_59132, RNA815_20934}
14. MligTC455_30377 273 5.69 Mlig455_033345, Mlig455_033366

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.788

Region-enriched R4: 4.455/0.00000

 4.622 0.967 0.960 0.964 0.811 - 0.920

Mlig455_033345 {REF} {Length: 2468} {TRANSSPLICED} {Pfam: Glycine rich protein family [PF07172.13, score=21.1]} {RNA1509_36435} {RNA1310_42062.1} {RNA815_26947}

Mlig455_033366 {REF} {Length: 2476} {Pfam: Glycine rich protein family [PF07172.13, score=23.1]} {RNA1509_36435} {RNA1310_42062.1, RNA1509_36435} {RNA1509_36435, RNA815_26947}
15. MligTC455_51619 168 3.5 Mlig455_044464

Neo: -

Age: -

Region-specific R4: 5.929

Region-enriched R4: 3.458/0.00014

 4.617 0.942 0.964 0.952 0.812 - 0.947 Mlig455_044464 {REF} {Length: 1106} {RNA1509_26062, RNA1509_37356, RNA1509_50127} {RNA1310_34145, RNA1509_26062, RNA1509_37356, RNA1509_50127} {RNA1509_26062, RNA1509_37356, RNA1509_50127, RNA815_15838}
16. MligTC455_07329 168 3.5 Mlig455_052748

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.476

Region-enriched R4: 3.160/0.02274

 4.596 0.944 0.979 0.990 0.871 - 0.812 Mlig455_052748 {REF} {Length: 3761} {RNA1509_24720, RNA1509_29201, RNA1509_43756, RNA1509_56021} {RNA1310_3574, RNA1509_24720, RNA1509_29201, RNA1509_43756, RNA1509_56021} {RNA1509_24720, RNA1509_29201, RNA1509_43756, RNA1509_56021, RNA815_4011}
17. MligTC455_25590 1343 27.98 Mlig455_011017, Mlig455_023879, Mlig455_048596, Mlig455_048675, Mlig455_048708

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.709

Region-enriched R4: 4.476/0.00004

 IDE 4.596 0.954 0.934 0.920 0.910 - 0.878

Mlig455_011017 {REF} {Length: 3461} {Pfam: Peptidase M16 inactive domain [PF05193.23, score=34.0]; Middle or third domain of peptidase_M16 [PF16187.7, score=27.7]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=107, Expect=8e-24]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=105, Expect=2e-23]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=105, Expect=2e-23]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=55.8, Expect=7e-08]} {Celegans: WBGene00013492, Y70C5C.1, [Score=104, Expect=2e-23]} {RNA1509_10904} {RNA1310_4247} {RNA815_1184}

Mlig455_023879 {REF} {Length: 3403} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=122.7]; Peptidase M16 inactive domain [PF05193.23, score=37.7]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=146, Expect=4e-35]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=140, Expect=2e-33]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=140, Expect=2e-33]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=76.3, Expect=1e-13]} {Celegans: WBGene00013492, Y70C5C.1, [Score=135, Expect=4e-32]} {RNA1509_10904} {RNA1310_4247} {RNA815_1184}

Mlig455_048596 {REF} {Length: 3170} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=89.0]; Peptidase M16 inactive domain [PF05193.23, score=37.7]; Insulinase (Peptidase family M16) [PF00675.22, score=18.9]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=117, Expect=4e-26]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=117, Expect=4e-26]} {Dmel: FBgn0037037, CG10588, [Score=51.2, Expect=5e-06]} {Celegans: WBGene00016185, C28F5.4, Putative zinc protease C28F5.4, [Score=88.2, Expect=1e-17]} {RNA1509_10904} {RNA1310_4247} {RNA815_1184}

Mlig455_048675 {REF} {Length: 3417} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=122.7]; Peptidase M16 inactive domain [PF05193.23, score=37.7]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=147, Expect=3e-35]} {Mouse: ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=141, Expect=1e-33]; ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=141, Expect=1e-33]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=77.4, Expect=5e-14]} {Celegans: WBGene00013492, Y70C5C.1, [Score=135, Expect=4e-32]} {RNA1509_10904} {RNA1310_4247} {RNA815_1184}

Mlig455_048708 {REF} {Length: 3466} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=124.4]; Peptidase M16 inactive domain [PF05193.23, score=37.7]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=146, Expect=5e-35]} {Mouse: ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=140, Expect=3e-33]; ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=140, Expect=3e-33]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=77.8, Expect=4e-14]} {Celegans: WBGene00013492, Y70C5C.1, [Score=135, Expect=3e-32]} {RNA1509_10904, RNA1509_24294, RNA1509_2616} {RNA1310_4247, RNA1509_24294, RNA1509_2616} {RNA1509_24294, RNA1509_2616, RNA815_1184}
18. MligTC455_17538 158 3.29 Mlig455_000938

Neo: Germline

Age: -

Region-specific R4: 6.343

Region-enriched R4: 3.327/0.02236

 4.588 0.957 0.954 0.921 0.877 - 0.879 Mlig455_000938 {REF} {Length: 791} {RNA1509_37604} {RNA1310_58023, RNA1509_37604} {RNA1509_37604, RNA815_31228}
19. MligTC455_13654 90 1.88 Mlig455_055933

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.071

Region-enriched R4: 4.143/0.00000

Regeneration-downregulated R4: -2.074

Regeneration-depleted R4: -2.074

 UFD1 4.586 0.862 0.951 0.993 0.903 - 0.877 Mlig455_055933 {REF} {Length: 1528} {Pfam: Ubiquitin fusion degradation protein UFD1 [PF03152.16, score=79.0]} {Human: ENSG00000070010, UFD1, ubiquitin recognition factor in ER associated degradation 1, [Score=76.3, Expect=5e-15]} {Mouse: ENSMUSG00000005262, Ufd1, ubiquitin recognition factor in ER-associated degradation 1, [Score=76.3, Expect=4e-15]} {Dmel: FBgn0036136, Ufd1-like, Ubiquitin fusion-degradation 1-like, [Score=77.0, Expect=2e-15]} {Celegans: WBGene00006733, ufd-1, Ubiquitin fusion degradation protein 1 homolog, [Score=76.3, Expect=3e-15]} {Smed: dd_Smed_v6_2792_0_1, dd_Smed_v6_2792_0_1, [Score=88.6, Expect=7e-20]} {RNA1509_21564, RNA1509_40979, RNA1509_50287, RNA1509_6275} {RNA1310_24116, RNA1509_21564, RNA1509_40979, RNA1509_50287, RNA1509_6275} {RNA1509_21564, RNA1509_40979, RNA1509_50287, RNA1509_6275, RNA815_10490}
20. MligTC455_41886 216 4.51 Mlig455_004189

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.687

Region-enriched R4: 4.532/0.00001

 4.585 0.954 0.970 0.939 0.848 - 0.874 Mlig455_004189 {REF} {Length: 2965} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=75.9, Expect=4e-15]} {RNA1509_16009, RNA1509_43368} {RNA1310_21432, RNA1509_43368} {RNA1509_43368, RNA815_11018}
21. MligTC455_18418 495 10.32 Mlig455_044810, Mlig455_055572

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.581

 4.584 0.892 0.971 0.990 0.838 - 0.893

Mlig455_044810 {REF} {Length: 2938} {RNA1509_6075} {RNA1310_4175} {RNA815_1202.1}

Mlig455_055572 {REF} {Length: 2948} {RNA1509_31329, RNA1509_6075} {RNA1310_4175, RNA1509_31329, RNA1509_6075} {RNA1509_31329, RNA1509_6075, RNA815_1202.1}
22. MligTC455_34382 312 6.5 Mlig455_036836

Neo: Irradiation

Age: Up-Up-Down

Region-specific R4: 5.749

Region-enriched R4: 4.285/0.00126

 4.583 0.920 0.987 0.801 0.981 - 0.894 Mlig455_036836 {REF} {Length: 690} {RNA1509_5931} {RNA1310_36130} {RNA815_20541}
23. MligTC455_06080 118 2.45 Mlig455_028177, Mlig455_028248

Neo: Germline

Age: -

Region-specific R4: 6.764

Region-enriched R4: 3.549/0.00010

 4.578 0.916 0.947 0.983 0.830 - 0.902

Mlig455_028177 {REF} {Length: 841} {NoTransDecoderORF} {RNA1509_56870} {RNA1310_45405} {RNA815_31063}

Mlig455_028248 {REF} {Length: 886} {RNA1509_51247, RNA1509_56870} {RNA1310_45405, RNA1509_51247, RNA1509_56870} {RNA1509_51247, RNA1509_56870, RNA815_31063}
24. MligTC455_24794 303 6.3 Mlig455_021633, Mlig455_021686

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.296

Region-specific R4: 7.227

Region-enriched R4: 4.321/0.00000

 4.578 0.977 0.974 0.968 0.777 - 0.882

Mlig455_021633 {REF} {Length: 3836} {RNA1509_50179, RNA1509_8555} {RNA1310_2773, RNA1509_50179} {RNA1509_50179, RNA815_7241}

Mlig455_021686 {REF} {Length: 3869} {RNA1509_8555} {RNA1310_2773, RNA1509_8555} {RNA1509_8555, RNA815_7241}
25. MligTC455_09004 214 4.45 Mlig455_054880

Neo: -

Age: -

Region-specific R4: 6.345

Region-enriched R4: 4.371/0.00000

Regeneration-downregulated R4: -2.632

Regeneration-depleted R4: -2.632

 4.576 0.948 0.986 0.959 0.768 - 0.915 Mlig455_054880 {REF} {Length: 1815} {NoTransDecoderORF} {RNA1509_52208} {RNA1310_36966.2} {RNA815_16138}
26. MligTC455_14861 193 4.01 Mlig455_021554, Mlig455_021557

Neo: Germline

Age: -

Region-specific R4: 7.221

Region-enriched R4: 4.716/0.00120

 4.575 0.962 0.958 0.899 0.848 - 0.908

Mlig455_021554 {REF} {Length: 520} {RNA1509_26247} {RNA1310_87848} {RNA815_45821}

Mlig455_021557 {REF} {Length: 526} {RNA1509_26247} {RNA1310_87848, RNA1509_26247} {RNA1509_26247, RNA815_45821}
27. MligTC455_22750 233 4.85 Mlig455_037443, Mlig455_057076

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.617

Region-specific R4: 6.271

Region-enriched R4: 3.580/0.00000

 4.575 0.944 0.970 0.918 0.833 - 0.910

Mlig455_037443 {REF} {Length: 514} {RNA1509_32444} {RNA1310_41193} {RNA815_23145.3}

Mlig455_057076 {REF} {Length: 974} {RNA1509_32444} {RNA1310_45085, RNA1509_32444} {RNA1509_32444, RNA815_23145.1}
28. MligTC455_08433 441 9.19 Mlig455_041035, Mlig455_041139

Neo: Germline

Age: -

Region-specific R4: 6.468

Region-enriched R4: 3.706/0.00000

 4.572 0.967 0.936 0.887 0.867 - 0.915

Mlig455_041035 {REF} {Length: 2651} {RNA1509_13017} {RNA1310_21330.1, RNA1509_13017} {RNA1509_13017, RNA815_28338}

Mlig455_041139 {REF} {Length: 1041} {RNA1509_13017} {RNA1310_55699} {RNA815_28338}
29. MligTC455_26959 316 6.58 Mlig455_025923, Mlig455_025955

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.488

Region-enriched R4: 4.239/0.00000

 TTLL10 4.572 0.974 0.948 0.963 0.827 - 0.860

Mlig455_025923 {REF} {Length: 2080} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=97.1]; YheC/D like ATP-grasp [PF14398.8, score=25.9]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=103, Expect=6e-23]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=115, Expect=2e-27]} {Dmel: FBgn0031853, TTLL3B, Tubulin tyrosine ligase-like 3B, [Score=77.0, Expect=1e-14]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=121, Expect=2e-29]} {RNA1509_9761} {RNA1310_8353, RNA1509_9761} {RNA1509_9761, RNA815_12498}

Mlig455_025955 {REF} {Length: 2082} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=97.1]; YheC/D like ATP-grasp [PF14398.8, score=25.8]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=103, Expect=6e-23]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=115, Expect=2e-27]} {Dmel: FBgn0031853, TTLL3B, Tubulin tyrosine ligase-like 3B, [Score=76.6, Expect=2e-14]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=121, Expect=2e-29]} {RNA1509_9761} {RNA1310_8353} {RNA815_12498}
30. MligTC455_31267 218 4.55 Mlig455_048585, Mlig455_048666, Mlig455_051622

Neo: -

Age: -

Region-specific R4: 6.688

Region-enriched R4: 4.506/0.00000
Region-enriched R3: 2.803/0.03006

 4.566 0.921 0.941 0.985 0.784 - 0.935

Mlig455_048585 {REF} {Length: 4575} {RNA1509_41432, RNA1509_52877} {RNA1310_5058.1, RNA1509_41432} {RNA1509_41432, RNA815_30060}

Mlig455_048666 {REF} {Length: 1528} {RNA1509_57689} {RNA1310_57587} {RNA815_30060}

Mlig455_051622 {REF} {Length: 919} {RNA1509_57689} {RNA1310_57587, RNA1509_57689} {RNA1509_57689, RNA815_30060}
31. MligTC455_16601 1066 22.2 Mlig455_006194, Mlig455_059281, Mlig455_065219

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.505

Region-enriched R4: 5.045/0.00000

 CHMP4B 4.565 0.959 0.975 0.969 0.743 - 0.919

Mlig455_006194 {REF} {Length: 1268} {Pfam: Snf7 [PF03357.23, score=144.9]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=163, Expect=6e-50]; ENSG00000254692, AL136295.1, novel protein, [Score=158, Expect=4e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=158, Expect=4e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=162, Expect=7e-50]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=8e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=160, Expect=2e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=169, Expect=6e-53]} {RNA1509_33100, RNA1509_7427} {RNA1310_28383, RNA1509_33100, RNA1509_7427} {RNA1509_33100, RNA1509_7427, RNA815_12898}

Mlig455_059281 {REF} {Length: 1249} {Pfam: Snf7 [PF03357.23, score=144.9]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=163, Expect=6e-50]; ENSG00000254692, AL136295.1, novel protein, [Score=158, Expect=4e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=158, Expect=4e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=162, Expect=7e-50]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=8e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=160, Expect=2e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=169, Expect=6e-53]} {RNA1509_29106, RNA1509_7427} {RNA1310_28383, RNA1509_29106} {RNA1509_29106, RNA815_12898}

Mlig455_065219 {REF} {Length: 1267} {Pfam: Snf7 [PF03357.23, score=144.3]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=161, Expect=3e-49]; ENSG00000254692, AL136295.1, novel protein, [Score=159, Expect=1e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=159, Expect=1e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=160, Expect=3e-49]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=6e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=159, Expect=9e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=168, Expect=1e-52]} {RNA1509_7427} {RNA1310_28383} {RNA815_12898}
32. MligTC455_19150 71 1.49 Mlig455_056501

Neo: -

Age: -

Region-specific R4: 6.975

Region-enriched R4: 6.367/0.00088

 4.561 0.931 0.878 0.993 0.873 - 0.886 Mlig455_056501 {REF} {Length: 729} {RNA1509_11166} {RNA1310_49744.1} {RNA815_25242}
33. MligTC455_40906 2609 54.36 Mlig455_023754, Mlig455_023779

Neo: -

Age: Up-Down-Down

Region-specific R4: 5.728

Region-enriched R4: 3.212/0.00309

Regeneration-downregulated R3: -4.911

Regeneration-depleted R3: -4.911

 4.561 0.929 0.954 0.950 0.849 - 0.879

Mlig455_023754 {REF} {Length: 902} {RNA1509_22085} {RNA1310_41359.1} {RNA815_21544}

Mlig455_023779 {REF} {Length: 902} {RNA1509_1848, RNA1509_22085} {RNA1310_41359.1, RNA1509_1848, RNA1509_22085} {RNA1509_1848, RNA1509_22085, RNA815_21544}
34. MligTC455_18490 2473 51.51 Mlig455_052167, Mlig455_060714, Mlig455_060724

Neo: -

Age: Down-Up-Down

Region-specific R4: 6.071

Region-enriched R4: 3.427/0.00042

Regeneration-downregulated TP: -7.877

Regeneration-depleted TP: -7.877

 4.56 0.938 0.992 0.919 0.826 - 0.885

Mlig455_052167 {REF} {Length: 834} {RNA1509_3662, RNA1509_4764} {RNA1310_64246.2, RNA1509_4764} {RNA1509_4764, RNA815_25481.1}

Mlig455_060714 {REF} {Length: 549} {RNA1509_3662} {RNA1310_12296.1} {RNA815_25481.1}

Mlig455_060724 {REF} {Length: 694} {RNA1509_18031, RNA1509_35514, RNA1509_3662} {RNA1310_12296.1, RNA1509_18031, RNA1509_35514, RNA1509_3662} {RNA1509_18031, RNA1509_35514, RNA1509_3662, RNA815_25481.2}
35. MligTC455_52711 134 2.8 Mlig455_027431, Mlig455_027436

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.507

Region-enriched R4: 4.964/0.00021

 4.56 0.957 0.921 0.861 0.929 - 0.892

Mlig455_027431 {REF} {Length: 4137} {RNA1509_4107, RNA1509_59403} {RNA1310_2225.1, RNA1509_59403} {RNA1509_59403, RNA815_686.1}

Mlig455_027436 {REF} {Length: 4384} {RNA1509_4107} {RNA1310_2225.1} {RNA815_686.1}
36. MligTC455_40899 206 4.3 Mlig455_019777, Mlig455_019801

Neo: Germline

Age: -

Region-specific R4: 7.261

Region-enriched R4: 4.066/0.00000

 4.556 0.943 0.974 0.906 0.871 - 0.862

Mlig455_019777 {REF} {Length: 1993} {RNA1509_55719} {RNA1310_15060} {RNA815_5990.1}

Mlig455_019801 {REF} {Length: 1944} {RNA1509_18270} {RNA1310_15998} {RNA815_5990.1}
37. MligTC455_20547 166 3.46 Mlig455_050591

Neo: -

Age: -

Region-specific R4: 5.933

Region-enriched R4: 3.512/0.00088

 NDUFS8 4.556 0.980 0.937 0.960 0.784 - 0.895 Mlig455_050591 {REF} {Length: 1826} {Pfam: 4Fe-4S binding domain [PF00037.29, score=49.7]; 4Fe-4S dicluster domain [PF12838.9, score=49.5]; 4Fe-4S dicluster domain [PF13187.8, score=33.0]; 4Fe-4S double cluster binding domain [PF13484.8, score=31.1]; 4Fe-4S dicluster domain [PF14697.8, score=29.6]; 4Fe-4S dicluster domain [PF13237.8, score=28.3]; 4Fe-4S binding domain [PF12837.9, score=27.8]; 4Fe-4S binding domain [PF12797.9, score=23.8]; 4Fe-4S binding domain [PF12800.9, score=23.5]; 4Fe-4S dicluster domain [PF13183.8, score=21.2]; 4Fe-4S dicluster domain [PF13534.8, score=19.1]} {Human: ENSG00000110717, NDUFS8, NADH:ubiquinone oxidoreductase core subunit S8, [Score=229, Expect=1e-73]} {Mouse: ENSMUSG00000059734, Ndufs8, NADH:ubiquinone oxidoreductase core subunit S8, [Score=223, Expect=5e-71]} {Dmel: FBgn0017567, ND-23, NADH dehydrogenase (ubiquinone) 23 kDa subunit, [Score=222, Expect=8e-71]} {Celegans: WBGene00020636, T20H4.5, Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, [Score=210, Expect=2e-66]} {Smed: dd_Smed_v6_849_0_1, dd_Smed_v6_849_0_1, [Score=221, Expect=7e-71]} {RNA1509_29291} {RNA1310_10356.2} {RNA815_7305}
38. MligTC455_30426 143 2.98 Mlig455_054847

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.391

Region-enriched R4: 6.311/0.00000

 4.555 0.961 0.910 0.907 0.862 - 0.915 Mlig455_054847 {REF} {Length: 1258} {RNA1509_29474, RNA1509_50175} {RNA1310_19336.1, RNA1509_29474} {RNA1509_29474, RNA815_9239.1}
39. MligTC455_22769 159 3.32 Mlig455_053542

Neo: Irradiation

Age: -

Region-specific R4: 6.498

Region-enriched R4: 4.188/0.00019

 4.554 0.885 0.925 0.958 0.898 - 0.888 Mlig455_053542 {REF} {Length: 576} {RNA1509_51891} {RNA1310_68550.2} {RNA815_35201.1}
40. MligTC455_45868 56 1.16 Mlig455_012764, Mlig455_021163, Mlig455_057862

Neo: Int S/G2/M

Age: -

 4.554 0.934 0.912 0.975 0.824 - 0.909

Mlig455_012764 {REF} {Length: 2288} {Pfam: F5/8 type C domain [PF00754.27, score=29.4]} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}

Mlig455_021163 {REF} {Length: 2502} {Pfam: F5/8 type C domain [PF00754.27, score=19.7]} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}

Mlig455_057862 {REF} {Length: 4610} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}
41. MligTC455_49748 492 10.25 Mlig455_011517, Mlig455_011595

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.828

Region-enriched R4: 2.304/0.01187

 ARPC4-TTLL3 4.554 0.965 0.964 0.980 0.800 - 0.845

Mlig455_011517 {REF} {Length: 3213} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=90.5]; YheC/D like ATP-grasp [PF14398.8, score=20.1]} {Human: ENSG00000250151, ARPC4-TTLL3, ARPC4-TTLL3 readthrough, [Score=55.8, Expect=2e-07]; ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=55.8, Expect=1e-07]; ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=54.3, Expect=7e-07]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=55.1, Expect=3e-07]; ENSMUSG00000038756, Ttll6, tubulin tyrosine ligase-like family, member 6, [Score=53.5, Expect=1e-06]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=67.0, Expect=2e-11]} {RNA1509_13905} {RNA1310_500} {RNA815_1534}

Mlig455_011595 {REF} {Length: 3209} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=90.5]; YheC/D like ATP-grasp [PF14398.8, score=19.6]} {Human: ENSG00000250151, ARPC4-TTLL3, ARPC4-TTLL3 readthrough, [Score=56.2, Expect=2e-07]; ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=56.2, Expect=2e-07]; ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=53.9, Expect=1e-06]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=55.5, Expect=3e-07]; ENSMUSG00000038756, Ttll6, tubulin tyrosine ligase-like family, member 6, [Score=53.9, Expect=9e-07]} {Smed: dd_Smed_v6_11158_0_1, dd_Smed_v6_11158_0_1, [Score=67.4, Expect=2e-11]} {RNA1509_13905, RNA1509_4934} {RNA1310_500, RNA1509_13905, RNA1509_4934} {RNA1509_13905, RNA1509_4934, RNA815_1534}
42. MligTC455_26716 1323 27.57 Mlig455_028295, Mlig455_067431, Mlig455_069566

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.308

Region-specific R4: 6.724

Region-enriched R4: 4.155/0.00102

 4.548 0.947 0.988 0.914 0.805 - 0.894

Mlig455_028295 {REF} {Length: 2387} {RNA1509_39365} {RNA1310_9951} {RNA815_1939.1}

Mlig455_067431 {REF} {Length: 2485} {RNA1509_30116, RNA1509_39365} {RNA1310_9951, RNA1509_30116, RNA1509_39365} {RNA1509_30116, RNA1509_39365, RNA815_1939.1}

Mlig455_069566 {REF} {Length: 2408} {RNA1509_27150, RNA1509_39365} {RNA1310_9951, RNA1509_27150} {RNA1509_27150, RNA815_1939.1}
43. MligTC455_17176 599 12.49 Mlig455_007912, Mlig455_008018

Neo: Germline

Age: -

Region-specific R4: 5.472

Region-enriched R4: 3.512/0.00001

 4.546 0.932 0.970 0.948 0.853 - 0.843

Mlig455_007912 {REF} {Length: 2132} {Pfam: Putative Phosphatase [PF06888.14, score=70.8]} {Dmel: FBgn0031048, CG12237, [RH, Score=55.5, Expect=2e-08]} {RNA1509_15077} {RNA1310_28932} {RNA815_26616}

Mlig455_008018 {REF} {Length: 2014} {Pfam: Putative Phosphatase [PF06888.14, score=70.8]} {Dmel: FBgn0031048, CG12237, [RH, Score=55.5, Expect=2e-08]} {RNA1509_15077} {RNA1310_28932, RNA1509_15077} {RNA1509_15077, RNA815_26616}
44. MligTC455_06551 94 1.96 Mlig455_064172

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.271

Region-enriched R4: 3.608/0.00442

 4.546 0.868 0.957 0.969 0.817 - 0.935 Mlig455_064172 {REF} {Length: 2845} {RNA1509_40295, RNA1509_52049} {RNA1310_19782, RNA1509_40295, RNA1509_52049} {RNA1509_40295, RNA1509_52049, RNA815_24302}
45. MligTC455_23721 177 3.7 Mlig455_015850

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.363

Region-enriched R4: 4.849/0.00027

 4.542 0.933 0.945 0.959 0.857 - 0.848 Mlig455_015850 {REF} {Length: 1786} {NoTransDecoderORF} {RNA1509_5199} {RNA1310_35911} {RNA815_17560}
46. MligTC455_30704 315 6.55 Mlig455_069706

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.460

Region-specific R4: 5.958

Region-enriched R4: 2.151/0.00994

 4.541 0.938 0.964 0.905 0.865 - 0.869 Mlig455_069706 {REF} {Length: 3491} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=111.8]} {RNA1509_6501} {RNA1310_3605.1} {RNA815_26244}
47. MligTC455_32341 289 6.03 Mlig455_056565

Neo: Irradiation

Age: -

Region-specific R4: 6.178

Region-enriched R4: 3.257/0.00020

 4.54 0.957 0.976 0.948 0.872 - 0.787 Mlig455_056565 {REF} {Length: 2089} {RNA1509_3582} {RNA1310_10163} {RNA815_3366.1}
48. MligTC455_10109 293 6.1 Mlig455_048170, Mlig455_048192

Neo: Irradiation

Age: -

Region-specific R4: 5.686

Region-enriched R4: 4.002/0.00000

 4.535 0.971 0.968 0.905 0.814 - 0.877

Mlig455_048170 {REF} {Length: 1500} {RNA1509_24982} {RNA1310_29998} {RNA815_15111}

Mlig455_048192 {REF} {Length: 1497} {RNA1509_24982} {RNA1310_29998} {RNA815_15111}
49. MligTC455_39234 473 9.86 Mlig455_042685

Neo: Irradiation

Age: logFC(26M/2M)=-0.485

Region-specific R4: 6.317

Region-enriched R4: 4.239/0.00000

Regeneration-downregulated R4: -2.068

Regeneration-depleted R4: -2.068

 4.535 0.976 0.975 0.852 0.843 - 0.889 Mlig455_042685 {REF} {Length: 1465} {RNA1509_1804} {RNA1310_22800.1, RNA1509_1804} {RNA1509_1804, RNA815_9652}
50. MligTC455_20316 103 2.15 Mlig455_022902

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.730

Region-specific R4: 5.387

Region-enriched R4: 3.812/0.00061

Regeneration-downregulated R4: -2.845

Regeneration-depleted R4: -2.845

 4.534 0.953 0.898 0.887 0.885 - 0.911 Mlig455_022902 {REF} {Length: 1679} {RNA1509_10210} {RNA1310_9343} {RNA815_7347}
51. MligTC455_47446 381 7.93 Mlig455_060164

Neo: -

Age: Down-Down-Down

Region-specific R4: 7.089

Region-enriched R4: 5.432/0.00000

Regeneration-downregulated R4: -2.431

Regeneration-depleted R4: -2.431

 4.534 0.931 0.877 0.981 0.820 - 0.925 Mlig455_060164 {REF} {Length: 852} {RNA1509_34852} {RNA1310_44026} {RNA815_28248}
52. MligTC455_21777 298 6.21 Mlig455_028207, Mlig455_063571

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.714

 4.533 0.942 0.975 0.979 0.848 - 0.789

Mlig455_028207 {REF} {Length: 1710} {RNA1509_42567, RNA1509_7932} {RNA1310_29963, RNA1509_42567, RNA1509_7932} {RNA1509_42567, RNA1509_7932, RNA815_28272}

Mlig455_063571 {REF} {Length: 1693} {RNA1509_42567} {RNA1310_29963} {RNA815_28272}
53. MligTC455_34449 931 19.39 Mlig455_038512, Mlig455_052240

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.280

Region-enriched R4: 4.950/0.00000

 PPP1CA, PPP1CC 4.529 0.955 0.965 0.933 0.810 - 0.866

Mlig455_038512 {REF} {Length: 1435} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=98.9]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=212, Expect=6e-66]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=212, Expect=9e-66]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=9e-64]} {Mouse: ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=212, Expect=5e-66]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=212, Expect=5e-66]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=211, Expect=1e-65]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=6e-64]} {Dmel: FBgn0003140, PpY-55A, Protein phosphatase Y at 55A, [Score=219, Expect=3e-69]} {Celegans: WBGene00004083, pph-1, Serine/threonine-protein phosphatase, [Score=218, Expect=3e-68]} {Smed: dd_Smed_v6_23492_0_1, dd_Smed_v6_23492_0_1, [Score=213, Expect=4e-67]} {RNA1509_8839} {RNA1310_21841} {RNA815_11327.2}

Mlig455_052240 {REF} {Length: 1392} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=98.9]} {Human: ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=211, Expect=2e-65]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=1e-65]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=2e-63]} {Mouse: ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=9e-66]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=9e-66]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=210, Expect=3e-65]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=1e-63]} {Dmel: FBgn0003140, PpY-55A, Protein phosphatase Y at 55A, [Score=219, Expect=5e-69]} {Celegans: WBGene00004083, pph-1, Serine/threonine-protein phosphatase, [Score=217, Expect=6e-68]} {Smed: dd_Smed_v6_23492_0_1, dd_Smed_v6_23492_0_1, [Score=213, Expect=5e-67]} {RNA1509_14310, RNA1509_8839} {RNA1310_21841, RNA1509_14310} {RNA1509_14310, RNA815_11327.2}
54. MligTC455_44055 305 6.36 Mlig455_034647

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.440

Region-specific R4: 5.358

Region-enriched R4: 3.152/0.00000

 4.526 0.977 0.979 0.938 0.774 - 0.858 Mlig455_034647 {REF} {Length: 2170} {RNA1509_8332} {RNA1310_14667, RNA1509_8332} {RNA1509_8332, RNA815_5671}
55. MligTC455_11018 1757 36.6 Mlig455_007571, Mlig455_030541

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.071
Region-specific R1: 4.428

Region-enriched R4: 3.403/0.00000

Regeneration-depleted R3: -3.440
Regeneration-depleted R5: -3.363
Regeneration-depleted R4: -1.765

 4.524 0.936 0.972 0.920 0.843 - 0.853

Mlig455_007571 {REF} {Length: 1469} {RNA1509_4041, RNA1509_44091, RNA1509_47555} {RNA1310_28188.1, RNA1509_4041, RNA1509_44091, RNA1509_47555} {RNA1509_4041, RNA1509_44091, RNA1509_47555, RNA815_13508}

Mlig455_030541 {REF} {Length: 1469} {RNA1509_11512, RNA1509_25156, RNA1509_4041, RNA1509_44141} {RNA1310_28188.1, RNA1509_11512, RNA1509_25156, RNA1509_44141} {RNA1509_11512, RNA1509_25156, RNA1509_44141, RNA815_13508}
56. MligTC455_49753 351 7.32 Mlig455_031618

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.030

Region-enriched R4: 3.400/0.00442

 ACP2 4.523 0.952 0.975 0.877 0.900 - 0.819 Mlig455_031618 {REF} {Length: 1772} {Pfam: Histidine phosphatase superfamily (branch 2) [PF00328.24, score=63.0]} {Human: ENSG00000134575, ACP2, acid phosphatase 2, lysosomal, [Score=158, Expect=6e-44]} {Mouse: ENSMUSG00000002103, Acp2, acid phosphatase 2, lysosomal, [Score=162, Expect=2e-45]} {Dmel: FBgn0000032, Acph-1, Acid phosphatase 1, [Score=144, Expect=1e-38]} {Celegans: WBGene00015161, pho-5, Putative acid phosphatase 5, [Score=164, Expect=3e-46]} {Smed: dd_Smed_v6_11594_0_1, dd_Smed_v6_11594_0_1, [Score=154, Expect=3e-42]} {RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415} {RNA1310_25105.1, RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415} {RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415, RNA815_11001.1}
57. MligTC455_23963 2780 57.91 Mlig455_001259, Mlig455_034615

Neo: Germline

Age: -

Region-specific R4: 4.183

Region-enriched R4: 3.560/0.00000

Regeneration-downregulated R4: -2.368

Regeneration-depleted R4: -2.368

 UBE2R2 4.52 0.949 0.965 0.948 0.818 - 0.840

Mlig455_001259 {REF} {Length: 1706} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=148.9]} {Human: ENSG00000107341, UBE2R2, ubiquitin conjugating enzyme E2 R2, [RH, Score=270, Expect=1e-87]; ENSG00000099804, CDC34, cell division cycle 34, [RH, Score=263, Expect=7e-85]} {Mouse: ENSMUSG00000036241, Ube2r2, ubiquitin-conjugating enzyme E2R 2, [RH, Score=270, Expect=7e-88]; ENSMUSG00000020307, Cdc34, cell division cycle 34, [RH, Score=261, Expect=1e-84]} {Dmel: FBgn0036516, CG7656, [RH, Score=271, Expect=3e-87]} {Celegans: WBGene00006702, ubc-3, UBiquitin Conjugating enzyme, [RH, Score=252, Expect=5e-81]} {Smed: dd_Smed_v6_8367_0_1, dd_Smed_v6_8367_0_1, [RH, Score=256, Expect=1e-82]} {RNA1509_2259} {RNA1310_22003.2} {RNA815_9365}

Mlig455_034615 {REF} {Length: 1032} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=154.6]} {Human: ENSG00000107341, UBE2R2, ubiquitin conjugating enzyme E2 R2, [RH, Score=264, Expect=4e-90]} {Mouse: ENSMUSG00000036241, Ube2r2, ubiquitin-conjugating enzyme E2R 2, [RH, Score=264, Expect=3e-90]} {Dmel: FBgn0036516, CG7656, [Score=261, Expect=8e-88]} {Celegans: WBGene00006702, ubc-3, UBiquitin Conjugating enzyme, [Score=241, Expect=4e-81]} {Smed: dd_Smed_v6_8367_0_1, dd_Smed_v6_8367_0_1, [Score=245, Expect=4e-83]} {RNA1509_10179, RNA1509_2259, RNA1509_41985} {RNA1310_22003.2, RNA1509_10179, RNA1509_2259, RNA1509_41985} {RNA1509_10179, RNA1509_2259, RNA1509_41985, RNA815_9365}
58. MligTC455_33933 414 8.62 Mlig455_065398

Neo: Irradiation

Age: -

Region-specific R4: 5.891

Region-enriched R4: 3.544/0.00000

 4.52 0.920 0.963 0.909 0.849 - 0.879 Mlig455_065398 {REF} {Length: 725} {RNA1509_51891, RNA1509_58788} {RNA1310_68550.3, RNA1509_51891, RNA1509_58788} {RNA1509_51891, RNA1509_58788, RNA815_35201.1}
59. MligTC455_44788 1195 24.9 Mlig455_019223, Mlig455_035557, Mlig455_035580

Neo: Germline

Age: -

Region-specific R4: 5.451

Region-enriched R4: 3.261/0.00000

Regeneration-downregulated TP: -7.503

Regeneration-depleted TP: -7.503

 KREMEN1 4.52 0.948 0.978 0.947 0.804 - 0.843

Mlig455_019223 {REF} {Length: 1137} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=61.8]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=60.1, Expect=5e-11]} {RNA1509_7555} {RNA1310_37466, RNA1509_7555} {RNA1509_7555, RNA815_17732}

Mlig455_035557 {REF} {Length: 726} {Pfam: WSC domain [PF01822.21, score=37.6]} {RNA1509_7555} {RNA1310_37466} {RNA815_17732}

Mlig455_035580 {REF} {Length: 1128} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=61.8]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=60.1, Expect=5e-11]} {RNA1509_29684, RNA1509_7555} {RNA1310_37466, RNA1509_29684} {RNA1509_29684, RNA815_17732}
60. MligTC455_14428 1616 33.68 Mlig455_007275, Mlig455_031834

Neo: Irradiation

Age: -

Region-specific R4: 6.073

Region-enriched R4: 3.753/0.00010

 4.517 0.926 0.959 0.966 0.899 - 0.767

Mlig455_007275 {REF} {Length: 870} {Pfam: EF-hand domain pair [PF13499.8, score=37.3]; EF-hand domain [PF13405.8, score=35.2]; EF hand [PF00036.34, score=32.6]; EF-hand domain pair [PF13833.8, score=28.4]; EF-hand domain [PF14658.8, score=20.2]} {RNA1509_16944} {RNA1310_50236} {RNA815_24973}

Mlig455_031834 {REF} {Length: 790} {Pfam: EF-hand domain pair [PF13499.8, score=37.3]; EF-hand domain [PF13405.8, score=35.2]; EF hand [PF00036.34, score=32.6]; EF-hand domain pair [PF13833.8, score=28.4]; EF-hand domain [PF14658.8, score=20.2]} {RNA1509_16944, RNA1509_51636} {RNA1310_50236, RNA1509_16944, RNA1509_51636} {RNA1509_16944, RNA1509_51636, RNA815_24973}
61. MligTC455_35513 47 0.97 Mlig455_041036

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 6.304/0.00001

 4.516 0.889 0.930 0.975 0.869 - 0.853 Mlig455_041036 {REF} {Length: 1656} {RNA1509_8592} {RNA1310_43895.1, RNA1509_8592} {RNA1509_8592, RNA815_21669.1}
62. MligTC455_14434 1867 38.91 Mlig455_028535, Mlig455_064725

Neo: -

Age: Down-Down-Down

Region-specific R4: 6.687

Region-enriched R4: 3.882/0.00000

Regeneration-downregulated R4: -2.498

Regeneration-depleted R4: -2.498

 FAM78B 4.512 0.924 0.973 0.891 0.870 - 0.854

Mlig455_028535 {REF} {Length: 1911} {Human: ENSG00000188859, FAM78B, family with sequence similarity 78 member B, [Score=116, Expect=1e-29]} {Mouse: ENSMUSG00000060568, Fam78b, family with sequence similarity 78, member B, [Score=116, Expect=8e-30]} {Smed: dd_Smed_v6_50260_0_1, dd_Smed_v6_50260_0_1, [Score=79.3, Expect=6e-18]} {RNA1509_1086} {RNA1310_23657.1} {RNA815_9864.1}

Mlig455_064725 {REF} {Length: 1533} {Human: ENSG00000188859, FAM78B, family with sequence similarity 78 member B, [Score=116, Expect=1e-29]} {Mouse: ENSMUSG00000060568, Fam78b, family with sequence similarity 78, member B, [Score=116, Expect=8e-30]} {Smed: dd_Smed_v6_50260_0_1, dd_Smed_v6_50260_0_1, [Score=79.3, Expect=6e-18]} {RNA1509_1086} {RNA1310_23657.1, RNA1509_1086} {RNA1509_1086, RNA815_9864.1}
63. MligTC455_11094 240 5 Mlig455_006933

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.850

Region-enriched R4: 3.205/0.00204

 4.51 0.903 0.964 0.938 0.769 - 0.936 Mlig455_006933 {REF} {Length: 1253} {RNA1509_3198} {RNA1310_28364} {RNA815_12666}
64. MligTC455_49647 896 18.67 Mlig455_017625, Mlig455_058946

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.190

Region-enriched R4: 3.340/0.00000
Region-enriched R8: 2.371/0.03418

 4.51 0.876 0.990 0.911 0.859 - 0.874

Mlig455_017625 {REF} {Length: 2561} {TRANSSPLICED} {Dmel: FBgn0037325, CG12147, [Score=54.7, Expect=2e-07]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=48.9, Expect=7e-06]} {RNA1509_20215} {RNA1310_7475, RNA1509_20215} {RNA1509_20215, RNA815_3584.1}

Mlig455_058946 {REF} {Length: 2586} {TRANSSPLICED} {Dmel: FBgn0037325, CG12147, [Score=54.7, Expect=1e-07]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=48.9, Expect=5e-06]} {RNA1509_13478, RNA1509_31994, RNA1509_49202} {RNA1310_7475, RNA1509_13478, RNA1509_31994, RNA1509_49202} {RNA1509_13478, RNA1509_31994, RNA1509_49202, RNA815_3584.1}
65. MligTC455_22751 394 8.22 Mlig455_007254, Mlig455_007345, Mlig455_015861, Mlig455_036587, Mlig455_038600, Mlig455_041298, Mlig455_053849, Mlig455_060441, Mlig455_062435, Mlig455_064129

Neo: Germline

Age: -

Region-specific R4: 6.359

Region-enriched R4: 4.764/0.00000

 4.509 0.951 0.916 0.977 0.759 - 0.906

Mlig455_007254 {REF} {Length: 229} {NoTransDecoderORF} {RNA1509_32832} {RNA1310_45085} {RNA815_26718}

Mlig455_007345 {REF} {Length: 588} {RNA1509_32444} {RNA1310_45085} {RNA815_23145.2}

Mlig455_015861 {REF} {Length: 1094} {RNA1509_32444} {RNA1310_29966} {RNA815_23145.3}

Mlig455_036587 {REF} {Length: 676} {Pfam: Phage integrase family [PF00589.24, score=32.8]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_038600 {REF} {Length: 1396} {Pfam: Phage integrase family [PF00589.24, score=32.3]; Domain of unknown function (DUF3504) [PF12012.10, score=25.5]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_041298 {REF} {Length: 449} {Pfam: THAP domain [PF05485.14, score=35.9]} {RNA1509_32832} {RNA1310_28735} {RNA815_22569.1}

Mlig455_053849 {REF} {Length: 1396} {Pfam: Phage integrase family [PF00589.24, score=32.3]; Domain of unknown function (DUF3504) [PF12012.10, score=25.5]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_060441 {REF} {Length: 784} {RNA1509_32444} {RNA1310_41193} {RNA815_23145.3}

Mlig455_062435 {REF} {Length: 6496} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=108.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=108.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.5]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=116, Expect=2e-31]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_064129 {REF} {Length: 1025} {NoTransDecoderORF} {RNA1509_32832} {RNA1310_112433} {RNA815_11263}
66. MligTC455_09003 533 11.11 Mlig455_054759, Mlig455_054879

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.132

Region-enriched R4: 4.367/0.00000

Regeneration-downregulated R4: -2.655

Regeneration-depleted R4: -2.655

 4.506 0.949 0.986 0.916 0.746 - 0.909

Mlig455_054759 {REF} {Length: 1507} {Pfam: Tetraspanin family [PF00335.22, score=54.8]} {Smed: dd_Smed_v6_13639_0_1, dd_Smed_v6_13639_0_1, [Score=62.0, Expect=1e-10]} {RNA1509_5635} {RNA1310_19798.1} {RNA815_11090}

Mlig455_054879 {REF} {Length: 1630} {Pfam: Tetraspanin family [PF00335.22, score=58.8]} {Smed: dd_Smed_v6_13639_0_1, dd_Smed_v6_13639_0_1, [Score=59.7, Expect=5e-10]} {RNA1509_5635} {RNA1310_19798.1} {RNA815_11090}
67. MligTC455_06628 174 3.63 Mlig455_031619

Neo: Irradiation

Age: -

Region-specific R4: 6.563

Region-enriched R4: 3.571/0.00003

 4.504 0.930 0.925 0.947 0.981 - 0.721 Mlig455_031619 {REF} {Length: 694} {TRANSSPLICED} {RNA1509_51192, RNA1509_56709} {RNA1310_52310, RNA1509_51192, RNA1509_56709} {RNA1509_51192, RNA1509_56709, RNA815_27342}
68. MligTC455_13978 388 8.08 Mlig455_007531, Mlig455_024787, Mlig455_030583

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.585

Region-enriched R4: 2.995/0.00485

 4.504 0.986 0.909 0.932 0.826 - 0.851

Mlig455_007531 {REF} {Length: 2595} {RNA1509_32577} {RNA1310_9161.1} {RNA815_24289}

Mlig455_024787 {REF} {Length: 3379} {RNA1509_32577} {RNA1310_9161.1} {RNA815_24289}

Mlig455_030583 {REF} {Length: 3481} {RNA1509_32577, RNA1509_55493, RNA1509_59638} {RNA1310_9161.1, RNA1509_32577, RNA1509_55493, RNA1509_59638} {RNA1509_32577, RNA1509_55493, RNA1509_59638, RNA815_24289}
69. MligTC455_22127 1548 32.24 Mlig455_015851

Neo: Germline

Age: -

Region-specific R4: 5.346

Region-enriched R4: 3.854/0.00000

Regeneration-downregulated BL: -4.969

Regeneration-depleted BL: -4.969

 4.503 0.968 0.994 0.928 0.743 - 0.870 Mlig455_015851 {REF} {Length: 1831} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=110, Expect=4e-27]} {RNA1509_734} {RNA1310_18571, RNA1509_734} {RNA1509_734, RNA815_7542}
70. MligTC455_16275 584 12.17 Mlig455_020732

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.146

Region-enriched R4: 3.491/0.00030

 WSCD2 4.502 0.930 0.980 0.886 0.827 - 0.879 Mlig455_020732 {REF} {Length: 1086} {Pfam: WSC domain [PF01822.21, score=59.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.9, Expect=1e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.4, Expect=1e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=50.4, Expect=1e-07]} {RNA1509_13997, RNA1509_17576, RNA1509_21652, RNA1509_35292} {RNA1310_29470, RNA1509_13997, RNA1509_17576, RNA1509_21652, RNA1509_35292} {RNA1509_13997, RNA1509_17576, RNA1509_21652, RNA1509_35292, RNA815_21393}
71. MligTC455_36105 331 6.9 Mlig455_045079

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.404

Region-enriched R4: 4.256/0.00008

 4.498 0.935 0.979 0.753 0.894 - 0.937 Mlig455_045079 {REF} {Length: 1216} {RNA1509_3120} {RNA1310_59847} {RNA815_64795}
72. MligTC455_38876 259 5.39 Mlig455_027670, Mlig455_049652

Neo: -

Age: -

Region-specific R4: 7.781

Region-enriched R4: 5.028/0.00000

 4.498 0.934 0.969 0.913 0.805 - 0.877

Mlig455_027670 {REF} {Length: 1168} {RNA1509_43723} {RNA1310_17632} {RNA815_19888}

Mlig455_049652 {REF} {Length: 3276} {RNA1509_43723} {RNA1310_1571.1} {RNA815_495.1}
73. MligTC455_34402 48 0.99 Mlig455_053893

Neo: Irradiation

Age: -

Region-enriched R4: 4.756/0.01468

 4.494 0.776 0.915 0.979 0.903 - 0.921 Mlig455_053893 {REF} {Length: 1335} {NoTransDecoderORF} {RNA1509_34695} {RNA1310_32236} {RNA815_37976}
74. MligTC455_47445 4627 96.4 Mlig455_002407, Mlig455_057629

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.314

Region-enriched R4: 3.889/0.00001

Regeneration-depleted TP: -8.160
Regeneration-depleted BL: -7.732

 4.492 0.893 0.959 0.982 0.800 - 0.858

Mlig455_002407 {REF} {Length: 851} {RNA1509_34852} {RNA1310_44026} {RNA815_28248}

Mlig455_057629 {REF} {Length: 911} {RNA1509_19021, RNA1509_39575, RNA1509_5699} {RNA1310_44026, RNA1509_19021, RNA1509_39575, RNA1509_5699} {RNA1509_19021, RNA1509_39575, RNA1509_5699, RNA815_28248}
75. MligTC455_02181 687 14.31 Mlig455_003644

Neo: Germline

Age: -

Region-specific R4: 5.873

Region-enriched R4: 4.361/0.00000

Regeneration-downregulated R4: -3.111

Regeneration-depleted R4: -3.111

 4.491 0.937 0.990 0.855 0.850 - 0.859 Mlig455_003644 {REF} {Length: 1451} {Pfam: RING-variant domain [PF12906.9, score=43.6]} {Mouse: ENSMUSG00000079557, March2, membrane-associated ring finger (C3HC4) 2, [Score=47.0, Expect=3e-06]} {Dmel: FBgn0029877, CG17717, [RH, Score=53.5, Expect=8e-09]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=49.3, Expect=2e-07]} {RNA1509_20424, RNA1509_25736, RNA1509_42138, RNA1509_51491, RNA1509_5696} {RNA1310_31304, RNA1509_20424, RNA1509_25736, RNA1509_42138, RNA1509_51491, RNA1509_5696} {RNA1509_20424, RNA1509_25736, RNA1509_42138, RNA1509_51491, RNA1509_5696, RNA815_16108}
76. MligTC455_18234 2031 42.31 Mlig455_030080, Mlig455_030166

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.270
Region-specific R1: 4.456

Region-enriched R4: 2.703/0.00136

 TUBB 4.491 0.938 0.978 0.984 0.729 - 0.862

Mlig455_030080 {REF} {Length: 2144} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=229.6]; Tubulin C-terminal domain [PF03953.19, score=143.0]; Misato Segment II tubulin-like domain [PF10644.11, score=24.8]} {Human: ENSG00000196230, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000258947, TUBB3, tubulin beta 3 class III, [Score=768, Expect=0.0]; ENSG00000227739, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000235067, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000224156, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000232421, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000183311, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000229684, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000232575, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [Score=766, Expect=0.0]; ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [Score=765, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin beta 2A class IIa, [Score=761, Expect=0.0]; ENSG00000104833, TUBB4A, tubulin beta 4A class IVa, [Score=757, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [Score=733, Expect=0.0]; ENSG00000198211, AC092143.1, novel protein (MC1R-TUBB3 readthrough), [Score=731, Expect=0.0]} {Mouse: ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [Score=768, Expect=0.0]; ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [Score=767, Expect=0.0]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [Score=766, Expect=0.0]; ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [Score=765, Expect=0.0]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [Score=761, Expect=0.0]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [Score=757, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [Score=733, Expect=0.0]} {Dmel: FBgn0003888, betaTub60D, beta-Tubulin at 60D, [Score=748, Expect=0.0]} {Celegans: WBGene00006536, tbb-1, Tubulin beta chain, [Score=748, Expect=0.0]} {Smed: dd_Smed_v6_83_0_2, dd_Smed_v6_83_0_2, [Score=763, Expect=0.0]} {RNA1509_1243} {RNA1310_3308.1, RNA1509_1243} {RNA1509_1243, RNA815_1039.1}

Mlig455_030166 {REF} {Length: 1818} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=229.6]; Tubulin C-terminal domain [PF03953.19, score=143.0]; Misato Segment II tubulin-like domain [PF10644.11, score=24.8]} {Human: ENSG00000196230, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000258947, TUBB3, tubulin beta 3 class III, [Score=768, Expect=0.0]; ENSG00000227739, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000235067, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000224156, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000232421, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000183311, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000229684, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000232575, TUBB, tubulin beta class I, [Score=768, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [Score=766, Expect=0.0]; ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [Score=765, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin beta 2A class IIa, [Score=761, Expect=0.0]; ENSG00000104833, TUBB4A, tubulin beta 4A class IVa, [Score=757, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [Score=733, Expect=0.0]; ENSG00000198211, AC092143.1, novel protein (MC1R-TUBB3 readthrough), [Score=731, Expect=0.0]} {Mouse: ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [Score=768, Expect=0.0]; ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [Score=767, Expect=0.0]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [Score=766, Expect=0.0]; ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [Score=765, Expect=0.0]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [Score=761, Expect=0.0]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [Score=757, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [Score=733, Expect=0.0]} {Dmel: FBgn0003888, betaTub60D, beta-Tubulin at 60D, [Score=748, Expect=0.0]} {Celegans: WBGene00006536, tbb-1, Tubulin beta chain, [Score=748, Expect=0.0]} {Smed: dd_Smed_v6_83_0_2, dd_Smed_v6_83_0_2, [Score=763, Expect=0.0]} {RNA1509_1243} {RNA1310_3308.1} {RNA815_1039.1}
77. MligTC455_05859 184 3.82 Mlig455_013602

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.369

Region-enriched R4: 4.999/0.00003

 4.49 0.892 0.976 0.906 0.767 - 0.949 Mlig455_013602 {REF} {Length: 1617} {RNA1509_17073} {RNA1310_20500.1} {RNA815_8599}
78. MligTC455_46289 285 5.94 Mlig455_055439

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 4.949

Region-enriched R4: 2.358/0.00034

 4.49 0.953 0.916 0.921 0.855 - 0.845 Mlig455_055439 {REF} {Length: 1224} {RNA1509_18541} {RNA1310_8605} {RNA815_21658}
79. MligTC455_18330 946 19.71 Mlig455_059437

Neo: Germline

Age: -

Region-specific R4: 5.670

Region-enriched R4: 4.011/0.00000

Regeneration-downregulated R4: -2.739

Regeneration-depleted R4: -2.739

 4.489 0.947 0.957 0.918 0.840 - 0.827 Mlig455_059437 {REF} {Length: 1309} {Pfam: Protein of unknown function (DUF678) [PF05077.14, score=20.1]} {RNA1509_13331, RNA1509_7276} {RNA1310_48461, RNA1509_13331, RNA1509_7276} {RNA1509_13331, RNA1509_7276, RNA815_25119.1}
80. MligTC455_51531 36 0.75 Mlig455_069426

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.849

 4.486 0.972 0.910 0.919 0.826 - 0.859 Mlig455_069426 {REF} {Length: 1021} {RNA1509_18144} {RNA1310_11588} {RNA815_6383}
81. MligTC455_23484 3490 72.7 Mlig455_010547, Mlig455_061788, Mlig455_061828

Neo: Germline

Age: -

Region-specific R4: 5.178

Region-enriched R4: 4.109/0.00000

Regeneration-downregulated R4: -2.976

Regeneration-depleted R4: -2.976

 SRI 4.486 0.921 0.989 0.912 0.811 - 0.853

Mlig455_010547 {REF} {Length: 2009} {Pfam: EF hand [PF00036.34, score=44.0]; EF-hand domain [PF13405.8, score=40.5]; EF-hand domain pair [PF13499.8, score=32.8]; EF hand [PF13202.8, score=25.4]} {Human: ENSG00000075142, SRI, sorcin, [Score=121, Expect=5e-34]; ENSG00000115271, GCA, grancalcin, [Score=119, Expect=1e-32]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [RH, Score=119, Expect=5e-33]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=78.6, Expect=6e-18]} {Celegans: WBGene00019770, M04F3.4, [Score=76.6, Expect=3e-17]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=90.1, Expect=2e-22]} {RNA1509_11825, RNA1509_50965} {RNA1310_25008.1, RNA1509_50965} {RNA1509_50965, RNA815_8403.2}

Mlig455_061788 {REF} {Length: 2113} {Pfam: EF hand [PF00036.34, score=40.8]; EF-hand domain [PF13405.8, score=36.0]; EF-hand domain pair [PF13499.8, score=32.1]; EF hand [PF13202.8, score=25.4]; EF-hand domain pair [PF13833.8, score=19.6]} {Human: ENSG00000075142, SRI, sorcin, [RH, Score=118, Expect=5e-33]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [Score=117, Expect=2e-32]; ENSMUSG00000026893, Gca, grancalcin, [Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_1457_0_1, dd_Smed_v6_1457_0_1, [Score=86.3, Expect=5e-21]} {RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662} {RNA1310_25492.1, RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662} {RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662, RNA815_8403.2}

Mlig455_061828 {REF} {Length: 2105} {Pfam: EF hand [PF00036.34, score=40.8]; EF-hand domain [PF13405.8, score=36.0]; EF-hand domain pair [PF13499.8, score=32.1]; EF hand [PF13202.8, score=25.4]; EF-hand domain pair [PF13833.8, score=19.6]} {Human: ENSG00000075142, SRI, sorcin, [RH, Score=118, Expect=5e-33]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [Score=117, Expect=2e-32]; ENSMUSG00000026893, Gca, grancalcin, [Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_1457_0_1, dd_Smed_v6_1457_0_1, [Score=86.3, Expect=5e-21]} {RNA1509_7662} {RNA1310_25492.1} {RNA815_8403.2}
82. MligTC455_34383 1253 26.11 Mlig455_052974, Mlig455_053035

Neo: Irradiation

Age: -

Region-specific R4: 5.935

Region-enriched R4: 4.276/0.00002

 4.484 0.955 0.980 0.804 0.851 - 0.894

Mlig455_052974 {REF} {Length: 943} {NoTransDecoderORF} {RNA1509_16780} {RNA1310_36130, RNA1509_16780} {RNA1509_16780, RNA815_20541}

Mlig455_053035 {REF} {Length: 672} {RNA1509_5931} {RNA1310_36130} {RNA815_20541}
83. MligTC455_51000 198 4.12 Mlig455_049960

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.562

Region-enriched R4: 4.208/0.00007

 4.48 0.942 0.954 0.954 0.752 - 0.878 Mlig455_049960 {REF} {Length: 1570} {RNA1509_26603} {RNA1310_40732.3, RNA1509_26603} {RNA1509_26603, RNA815_27303.1}
84. MligTC455_32000 89 1.84 Mlig455_065403

Neo: Germline

Age: Down-Down-Up

Region-enriched R4: 4.171/0.00009

 FKRP 4.478 0.940 0.952 0.955 0.741 - 0.890 Mlig455_065403 {REF} {Length: 4520} {Pfam: LicD family [PF04991.15, score=59.9]} {Human: ENSG00000181027, FKRP, fukutin related protein, [Score=48.1, Expect=1e-05]} {Mouse: ENSMUSG00000048920, Fkrp, fukutin related protein, [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_22064_0_1, dd_Smed_v6_22064_0_1, [Score=103, Expect=3e-25]} {RNA1509_48974} {RNA1310_21292} {RNA815_8600.1}
85. MligTC455_09246 51 1.07 Mlig455_003134

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.651

 FKBP4 4.477 0.966 0.928 0.975 0.880 - 0.728 Mlig455_003134 {REF} {Length: 1951} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=98.8]; Tetratricopeptide repeat [PF00515.30, score=48.4]; Tetratricopeptide repeat [PF07719.19, score=39.4]; Tetratricopeptide repeat [PF14559.8, score=27.2]; Tetratricopeptide repeat [PF13371.8, score=25.7]; TPR repeat [PF13414.8, score=25.4]; Tetratricopeptide repeat [PF13428.8, score=24.1]; Tetratricopeptide repeat [PF13181.8, score=24.0]; Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=20.8]} {Human: ENSG00000004478, FKBP4, FK506 binding protein 4, [Score=273, Expect=5e-86]} {Mouse: ENSMUSG00000030357, Fkbp4, FK506 binding protein 4, [Score=270, Expect=8e-85]} {Dmel: FBgn0029174, FKBP59, FK506-binding protein FKBP59, [Score=199, Expect=3e-58]} {Celegans: WBGene00001431, fkb-6, Peptidylprolyl isomerase, [Score=211, Expect=5e-63]} {Smed: dd_Smed_v6_1921_0_1, dd_Smed_v6_1921_0_1, [Score=190, Expect=4e-55]} {RNA1509_12859, RNA1509_20590} {RNA1310_7830, RNA1509_12859, RNA1509_20590} {RNA1509_12859, RNA1509_20590, RNA815_860}
86. MligTC455_11652 810 16.87 Mlig455_007089

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.500

Region-enriched R4: 4.064/0.00000

 4.476 0.913 0.956 0.962 0.794 - 0.851 Mlig455_007089 {REF} {Length: 1234} {RNA1509_27607, RNA1509_44532} {RNA1310_27904.1, RNA1509_27607} {RNA1509_27607, RNA815_15718}
87. MligTC455_12137 186 3.88 Mlig455_016156

Neo: Germline

Age: -

Region-specific R4: 5.846

Region-enriched R4: 3.967/0.00000

 4.476 0.916 0.968 0.995 0.802 - 0.795 Mlig455_016156 {REF} {Length: 1266} {RNA1509_32479, RNA1509_42695} {RNA1310_34362, RNA1509_32479, RNA1509_42695} {RNA1509_32479, RNA1509_42695, RNA815_15949}
88. MligTC455_38109 869 18.1 Mlig455_017532, Mlig455_026821, Mlig455_035714

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.412

Region-enriched R4: 3.656/0.00000

Regeneration-downregulated R4: -2.467

Regeneration-depleted R4: -2.467

 4.476 0.953 0.985 0.895 0.888 - 0.755

Mlig455_017532 {REF} {Length: 1081} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=21.8]} {RNA1509_45144} {RNA1310_69368.2, RNA1509_45144} {RNA1509_45144, RNA815_36754}

Mlig455_026821 {REF} {Length: 1101} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=24.0]} {RNA1509_45144, RNA1509_56162} {RNA1310_71546, RNA1509_56162} {RNA1509_56162, RNA815_36754}

Mlig455_035714 {REF} {Length: 535} {NoTransDecoderORF}
89. MligTC455_50554 548 11.41 Mlig455_010186, Mlig455_058670, Mlig455_058682

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.540

Region-specific R4: 6.359

Region-enriched R4: 2.725/0.02605

 SON 4.475 0.913 0.982 0.860 0.806 - 0.914

Mlig455_010186 {REF} {Length: 5621} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=58.2, Expect=9e-08]} {RNA1509_16394} {RNA1310_4095.1} {RNA815_3515}

Mlig455_058670 {REF} {Length: 5643} {Human: ENSG00000159140, SON, SON DNA binding protein, [Score=60.5, Expect=3e-08]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=60.5, Expect=2e-08]} {RNA1509_16394, RNA1509_6905} {RNA1310_4095.1, RNA1509_6905} {RNA1509_6905, RNA815_3515}

Mlig455_058682 {REF} {Length: 1087} {RNA1509_6905} {RNA1310_28309} {RNA815_17459}
90. MligTC455_08432 639 13.32 Mlig455_042603, Mlig455_042616, Mlig455_042649, Mlig455_042681

Neo: Irradiation

Age: -

Region-specific R4: 7.732

Region-enriched R4: 6.035/0.00000

 4.474 0.928 0.976 0.826 0.817 - 0.927

Mlig455_042603 {REF} {Length: 1528} {RNA1509_12348} {RNA1310_34510} {RNA815_15637.1}

Mlig455_042616 {REF} {Length: 1016} {RNA1509_12348} {RNA1310_34510} {RNA815_15637.1}

Mlig455_042649 {REF} {Length: 738} {RNA1509_12348} {RNA1310_34510} {RNA815_15637.2}

Mlig455_042681 {REF} {Length: 1630} {RNA1509_12348, RNA1509_59588} {RNA1310_34510, RNA1509_12348, RNA1509_59588} {RNA1509_12348, RNA1509_59588, RNA815_15637.1}
91. MligTC455_40206 86 1.78 Mlig455_059439

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.689

Region-enriched R4: 2.922/0.02473

 4.474 0.938 0.956 1.000 0.768 - 0.812 Mlig455_059439 {REF} {Length: 1940} {RNA1509_20476, RNA1509_54675} {RNA1310_19483, RNA1509_54675} {RNA1509_54675, RNA815_26243}
92. MligTC455_47681 642 13.38 Mlig455_005061, Mlig455_005253

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.413

Region-enriched R4: 3.515/0.00000

 4.474 0.943 0.967 0.879 0.774 - 0.911

Mlig455_005061 {REF} {Length: 2371} {RNA1509_20147} {RNA1310_12380} {RNA815_3858.2}

Mlig455_005253 {REF} {Length: 2665} {RNA1509_14028, RNA1509_20147, RNA1509_42797} {RNA1310_12380, RNA1509_14028, RNA1509_20147, RNA1509_42797} {RNA1509_14028, RNA1509_20147, RNA1509_42797, RNA815_3858.2}
93. MligTC455_42206 484 10.09 Mlig455_035156

Neo: Germline

Age: -

Region-specific R4: 6.218

Region-enriched R4: 3.520/0.00000

 CSNK1E 4.471 0.943 0.859 0.956 0.778 - 0.935 Mlig455_035156 {REF} {Length: 2281} {Human: ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [Score=57.8, Expect=3e-08]; ENSG00000141551, CSNK1D, casein kinase 1 delta, [Score=57.8, Expect=2e-08]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [Score=57.8, Expect=3e-08]} {Mouse: ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [Score=57.8, Expect=2e-08]; ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [Score=57.8, Expect=2e-08]} {Dmel: FBgn0037325, CG12147, [Score=59.7, Expect=3e-09]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=54.3, Expect=9e-08]} {Smed: dd_Smed_v6_7727_0_1, dd_Smed_v6_7727_0_1, [Score=66.6, Expect=6e-12]} {RNA1509_3239} {RNA1310_2112, RNA1509_3239} {RNA1509_3239, RNA815_3877}
94. MligTC455_25811 109 2.26 Mlig455_011730, Mlig455_036371, Mlig455_036403, Mlig455_046144, Mlig455_046230, Mlig455_066711

Neo: Germline

Age: -

Region-enriched R4: 4.044/0.02558

 4.47 0.766 0.882 0.954 0.901 - 0.967

Mlig455_011730 {REF} {Length: 672} {NoTransDecoderORF} {RNA1310_39576.1} {RNA815_25457.3}

Mlig455_036371 {REF} {Length: 740} {NoTransDecoderORF} {RNA1310_18367} {RNA815_25457.1}

Mlig455_036403 {REF} {Length: 742} {RNA1310_18367} {RNA815_25457.1}

Mlig455_046144 {REF} {Length: 956} {RNA1310_18367} {RNA815_25457.2}

Mlig455_046230 {REF} {Length: 948} {RNA1310_18367} {RNA815_25457.1}

Mlig455_066711 {REF} {Length: 1216} {Pfam: Phage integrase, N-terminal SAM-like domain [PF13495.8, score=20.9]} {RNA1310_18367} {RNA815_25457.1}
95. MligTC455_11653 785 16.36 Mlig455_007099

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.490

Region-enriched R4: 4.015/0.00000

 4.469 0.910 0.953 0.958 0.799 - 0.849 Mlig455_007099 {REF} {Length: 1112} {RNA1509_24100, RNA1509_25998, RNA1509_44532} {RNA1310_27904.2, RNA1509_24100, RNA1509_25998, RNA1509_44532} {RNA1509_24100, RNA1509_25998, RNA1509_44532, RNA815_23946.1}
96. MligTC455_22128 2438 50.78 Mlig455_007696, Mlig455_016069

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.944

Region-enriched R4: 4.062/0.00000

Regeneration-depleted BL: -4.988
Regeneration-depleted TP: -4.767

 4.468 0.951 0.990 0.941 0.730 - 0.856

Mlig455_007696 {REF} {Length: 1757} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=85.9, Expect=8e-19]} {RNA1509_734} {RNA1310_18571} {RNA815_7542}

Mlig455_016069 {REF} {Length: 1639} {Smed: dd_Smed_v6_11792_0_1, dd_Smed_v6_11792_0_1, [Score=110, Expect=3e-27]} {RNA1509_6865, RNA1509_734} {RNA1310_18571, RNA1509_6865} {RNA1509_6865, RNA815_7542}
97. MligTC455_28689 164 3.42 Mlig455_065986

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.149

Region-enriched R4: 3.052/0.00045

 4.466 0.945 0.981 0.969 0.718 - 0.853 Mlig455_065986 {REF} {Length: 3552} {RNA1509_8490} {RNA1310_3504} {RNA815_1441}
98. MligTC455_32168 1982 41.29 Mlig455_053507

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.306

Region-specific R4: 5.799

Region-enriched R4: 3.697/0.00000

Regeneration-depleted BL: -5.943
Regeneration-depleted R3: -3.747
Regeneration-depleted R4: -2.594

 LCP1 4.465 0.948 0.977 0.911 0.743 - 0.886 Mlig455_053507 {REF} {Length: 964} {Pfam: Calponin homology (CH) domain [PF00307.33, score=94.8]; CAMSAP CH domain [PF11971.10, score=22.2]} {Human: ENSG00000136167, LCP1, lymphocyte cytosolic protein 1, [Score=124, Expect=3e-29]; ENSG00000102024, PLS3, plastin 3, [Score=120, Expect=6e-28]} {Mouse: ENSMUSG00000021998, Lcp1, lymphocyte cytosolic protein 1, [Score=129, Expect=5e-31]} {Smed: dd_Smed_v6_749_0_1, dd_Smed_v6_749_0_1, [Score=154, Expect=1e-39]} {RNA1509_26007} {RNA1310_11944} {RNA815_3838.1}
99. MligTC455_21313 179 3.73 Mlig455_048670

Neo: -

Age: -

Region-specific R4: 6.020

Region-enriched R4: 2.813/0.02876

 4.463 0.950 0.947 0.902 0.748 - 0.916 Mlig455_048670 {REF} {Length: 3069} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=94.5]} {Dmel: FBgn0001247, Ide, Insulin degrading metalloproteinase, [Score=115, Expect=5e-26]} {Celegans: WBGene00013492, Y70C5C.1, [Score=76.6, Expect=4e-14]} {RNA1509_17969} {RNA1310_919.1} {RNA815_266.1}
100. MligTC455_11406 286 5.95 Mlig455_029367

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.567

Region-enriched R4: 3.050/0.00238

 4.461 0.916 0.971 0.952 0.772 - 0.850 Mlig455_029367 {REF} {Length: 2240} {Dmel: FBgn0029697, CG15570, [Score=56.6, Expect=5e-08]} {RNA1509_37272} {RNA1310_12308.1, RNA1509_37272} {RNA1509_37272, RNA815_21991}

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