Data search


search
Exact
Search

Results for MligTC455_33751

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33751 348 7.24 Mlig455_062717

Neo: -

Age: logFC(26M/2M)=-0.301

WDR33 Mlig455_062717 {REF} {Length: 3107} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=130.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=53.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=52.2]} {Human: ENSG00000136709, WDR33, WD repeat domain 33, [RH, Score=570, Expect=0.0]} {Mouse: ENSMUSG00000024400, Wdr33, WD repeat domain 33, [RH, Score=571, Expect=0.0]} {Dmel: FBgn0046222, Wdr33, WD repeat domain 33, [RH, Score=553, Expect=0.0]} {Celegans: WBGene00011051, pfs-2, Polyadenylation Factor Subunit homolog, [RH, Score=454, Expect=2e-148]} {Smed: dd_Smed_v6_5567_0_1, dd_Smed_v6_5567_0_1, [RH, Score=583, Expect=0.0]} {RNA1509_7691} {RNA1310_5200.1, RNA1509_7691} {RNA1509_7691, RNA815_4178}

Cumulative graph for MligTC455_33751

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.333 3.258 0.83814 1.00000
RegionR2 -0.904 3.258 0.15703 0.49582
RegionR3 -0.724 3.258 0.15505 0.66607
RegionR4 0.908 3.258 0.12185 0.35017
RegionR5 0.423 3.258 0.31415 0.65377
RegionR6 -0.44 3.258 0.38473 0.96245
RegionR7 0.206 3.258 0.74165 1.00000
RegionR8 0.197 3.258 0.79348 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.966 3.258 0.61644 1.00000
RegenerationR2 0.683 3.258 0.17787 0.61947
RegenerationR3 0.465 3.258 0.41783 0.81356
RegenerationR4 -0.444 3.258 0.42402 0.82769
RegenerationR5 -0.205 3.258 0.68233 0.94438
RegenerationR6 0.654 3.258 0.26039 0.61034
RegenerationBL 0.47 3.258 0.48200 0.84692
RegenerationTP 0.009 3.258 0.99054 1.00000


Genes with expression patterns similar to MligTC455_33751

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33751 348 7.24 Mlig455_062717

Neo: -

Age: logFC(26M/2M)=-0.301

WDR33 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062717 {REF} {Length: 3107} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=130.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=53.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=52.2]} {Human: ENSG00000136709, WDR33, WD repeat domain 33, [RH, Score=570, Expect=0.0]} {Mouse: ENSMUSG00000024400, Wdr33, WD repeat domain 33, [RH, Score=571, Expect=0.0]} {Dmel: FBgn0046222, Wdr33, WD repeat domain 33, [RH, Score=553, Expect=0.0]} {Celegans: WBGene00011051, pfs-2, Polyadenylation Factor Subunit homolog, [RH, Score=454, Expect=2e-148]} {Smed: dd_Smed_v6_5567_0_1, dd_Smed_v6_5567_0_1, [RH, Score=583, Expect=0.0]} {RNA1509_7691} {RNA1310_5200.1, RNA1509_7691} {RNA1509_7691, RNA815_4178}
2. MligTC455_43160 545 11.35 Mlig455_003758

Neo: -

Age: -

0.981 - - - - - 0.981 Mlig455_003758 {REF} {Length: 3528} {Pfam: Pleckstrin homology domain [PF16457.7, score=34.5]} {RNA1509_8115} {RNA1310_5263} {RNA815_10225}
3. MligTC455_30108 1243 25.89 Mlig455_023221, Mlig455_025483, Mlig455_035874, Mlig455_060689

Neo: -

Age: -

0.98 - - - - 0.980 -

Mlig455_023221 {REF} {Length: 1610} {TRANSSPLICED} {RNA1509_9107} {RNA1310_13804} {RNA815_857.1}

Mlig455_025483 {REF} {Length: 2124} {TRANSSPLICED} {RNA1509_9107} {RNA1310_12191, RNA1509_9107} {RNA1509_9107, RNA815_10451}

Mlig455_035874 {REF} {Length: 1608} {TRANSSPLICED} {RNA1509_9107} {RNA1310_13804} {RNA815_857.1}

Mlig455_060689 {REF} {Length: 1888} {TRANSSPLICED} {RNA1509_9107} {RNA1310_13804} {RNA815_857.1}
4. MligTC455_30118 613 12.77 Mlig455_015882, Mlig455_070728

Neo: -

Age: logFC(26M/2M)=-0.325

0.973 - - - - 0.973 -

Mlig455_015882 {REF} {Length: 1639} {TRANSSPLICED} {RNA1509_9107} {RNA1310_13804} {RNA815_857.1}

Mlig455_070728 {REF} {Length: 2202} {TRANSSPLICED} {RNA1509_9107} {RNA1310_39363} {RNA815_857.1}
5. MligTC455_15820 282 5.88 Mlig455_036593

Neo: -

Age: Down-Up-Down

0.972 - - - - 0.972 - Mlig455_036593 {REF} {Length: 3110} {RNA1509_54387, RNA1509_55696} {RNA1310_7156, RNA1509_54387, RNA1509_55696} {RNA1509_54387, RNA1509_55696, RNA815_2387.3}
6. MligTC455_43161 526 10.95 Mlig455_003918

Neo: -

Age: -

ELMO1 0.956 - - - - - 0.956 Mlig455_003918 {REF} {Length: 5229} {TRANSSPLICED} {Pfam: ELMO/CED-12 family [PF04727.15, score=54.3]; Pleckstrin homology domain [PF16457.7, score=41.1]; Domain of unknown function (DUF3361) [PF11841.10, score=27.1]} {Human: ENSG00000155849, ELMO1, engulfment and cell motility 1, [RH, Score=117, Expect=2e-26]} {Mouse: ENSMUSG00000041112, Elmo1, engulfment and cell motility 1, [RH, Score=115, Expect=5e-26]} {Dmel: FBgn0032409, Ced-12, [RH, Score=114, Expect=6e-26]} {Celegans: WBGene00000426, ced-12, Cell death abnormality protein 12, [RH, Score=55.5, Expect=2e-07]} {RNA1509_57726, RNA1509_8115} {RNA1310_5263, RNA1509_57726, RNA1509_8115} {RNA1509_57726, RNA1509_8115, RNA815_8531}
7. MligTC455_35329 976 20.33 Mlig455_032927, Mlig455_032941, Mlig455_032974

Neo: Neoblast

Age: -

TRMT10B, TRMT10C 0.953 - - - - 0.953 -

Mlig455_032927 {REF} {Length: 2257} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=47.5]} {Human: ENSG00000174173, TRMT10C, tRNA methyltransferase 10C, mitochondrial RNase P subunit, [RH, Score=87.4, Expect=3e-18]} {Mouse: ENSMUSG00000044763, Trmt10c, tRNA methyltransferase 10C, [RH, Score=97.1, Expect=1e-21]} {Dmel: FBgn0031189, CG14618, [Score=56.6, Expect=1e-08]} {Celegans: WBGene00018513, F46F11.10, [RH, Score=63.9, Expect=5e-11]} {Smed: dd_Smed_v6_7440_0_1, dd_Smed_v6_7440_0_1, [RH, Score=99.4, Expect=4e-23]} {RNA1509_16123} {RNA1310_17315} {RNA815_2705}

Mlig455_032941 {REF} {Length: 2257} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=47.7]} {Human: ENSG00000174173, TRMT10C, tRNA methyltransferase 10C, mitochondrial RNase P subunit, [RH, Score=87.8, Expect=2e-18]} {Mouse: ENSMUSG00000044763, Trmt10c, tRNA methyltransferase 10C, [RH, Score=97.8, Expect=6e-22]} {Dmel: FBgn0031189, CG14618, [Score=57.8, Expect=5e-09]} {Celegans: WBGene00018513, F46F11.10, [RH, Score=64.3, Expect=4e-11]} {Smed: dd_Smed_v6_7440_0_1, dd_Smed_v6_7440_0_1, [RH, Score=98.2, Expect=1e-22]} {RNA1509_16123} {RNA1310_17315} {RNA815_2705}

Mlig455_032974 {REF} {Length: 2021} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=30.8]} {Human: ENSG00000165275, TRMT10B, tRNA methyltransferase 10B, [Score=56.2, Expect=2e-08]; ENSG00000174173, TRMT10C, tRNA methyltransferase 10C, mitochondrial RNase P subunit, [Score=53.5, Expect=2e-07]} {Mouse: ENSMUSG00000004127, Trmt10a, tRNA methyltransferase 10A, [Score=57.8, Expect=4e-09]; ENSMUSG00000044763, Trmt10c, tRNA methyltransferase 10C, [Score=57.4, Expect=9e-09]; ENSMUSG00000035601, Trmt10b, tRNA methyltransferase 10B, [Score=55.5, Expect=2e-08]} {Celegans: WBGene00018513, F46F11.10, [Score=47.4, Expect=7e-06]} {Smed: dd_Smed_v6_12052_0_1, dd_Smed_v6_12052_0_1, [Score=60.8, Expect=2e-10]} {RNA1509_16123} {RNA1310_17315} {RNA815_2705}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA