TomoSeq data search

Data search

Results for MligTC455_33796

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33796

331

6.89

Mlig455_025130

Neo: -

Age: Up-Down-Up

Mlig455_025130 {REF} {Length: 2939} {RNA1509_18097} {RNA1310_43202} {RNA815_22244}

Cumulative graph for MligTC455_33796

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.429	3.125	0.69334	1.00000
RegionR2	-4.304	3.125	0.99926	1.00000
RegionR3	-3.169	3.125	1.00000	1.00000
RegionR4	2.958	3.125	0.01325	0.07515
RegionR5	1.5	3.125	0.08686	0.27710
RegionR6	-3.276	3.125	1.00000	1.00000
RegionR7	1.437	3.125	0.15399	0.72631
RegionR8	4.425	3.125	0.00127	0.05568

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.344	3.125	0.17670	0.91886
RegenerationR2	3.675	3.125	0.02795	0.27629
RegenerationR3	6.501	3.125	0.00035	0.02591
RegenerationR4	2.615	3.125	0.06023	0.39342
RegenerationR5	2.9	3.125	0.03941	0.32685
RegenerationR6	5.399	3.125	0.01011	0.12412
RegenerationBL	1.432	3.125	0.22351	0.57236
RegenerationTP	-3.654	3.125	0.01981	0.24139

Genes with expression patterns similar to MligTC455_33796

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33796	331	6.89	Mlig455_025130	Neo: - Age: Up-Down-Up		4	-	-	1.000	1.000	1.000	1.000	Mlig455_025130 {REF} {Length: 2939} {RNA1509_18097} {RNA1310_43202} {RNA815_22244}
2.	MligTC455_45325	6150	128.13	Mlig455_070209	Neo: - Age: Down-Up-Up Region-enriched R3: 1.695/0.00032		1.829	-	-	-	0.953	-	0.876	Mlig455_070209 {REF} {Length: 462} {TRANSSPLICED} {RNA1509_57144, RNA1509_6566, RNA1509_9398} {RNA1310_15954.1, RNA1509_57144, RNA1509_9398} {RNA1509_57144, RNA1509_9398, RNA815_11520.1}
3.	MligTC455_13487	45	0.94	Mlig455_054842	Neo: - Age: Up-Down-Up	SOBP	1.828	-	-	-	0.865	-	0.963	Mlig455_054842 {REF} {Length: 2581} {Human: ENSG00000112320, SOBP, sine oculis binding protein homolog, [RH, Score=61.2, Expect=5e-09]} {Mouse: ENSMUSG00000038248, Sobp, sine oculis binding protein, [RH, Score=61.2, Expect=3e-09]} {Dmel: FBgn0033654, Sobp, Sine oculis-binding protein, [RH, Score=68.2, Expect=2e-11]} {Smed: dd_Smed_v6_31841_0_1, dd_Smed_v6_31841_0_1, [RH, Score=55.1, Expect=7e-08]} {RNA1310_69955} {RNA815_45892}
4.	MligTC455_38976	212	4.41	Mlig455_032433	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.449 Region-enriched R3: 3.286/0.00058 Region-enriched R5: 2.636/0.00326	KYNU	1.789	-	-	-	0.975	-	0.814	Mlig455_032433 {REF} {Length: 1657} {TRANSSPLICED} {Pfam: Aminotransferase class-V [PF00266.21, score=44.9]; DegT/DnrJ/EryC1/StrS aminotransferase family [PF01041.19, score=20.8]} {Human: ENSG00000115919, KYNU, kynureninase, [RH, Score=408, Expect=7e-140]} {Mouse: ENSMUSG00000026866, Kynu, kynureninase, [RH, Score=424, Expect=2e-146]} {Celegans: WBGene00015802, kynu-1, Kynureninase, [Score=429, Expect=4e-148]} {Smed: dd_Smed_v6_4299_0_1, dd_Smed_v6_4299_0_1, [Score=417, Expect=6e-144]} {RNA1509_46160} {RNA1310_12731} {RNA815_15659}
5.	MligTC455_53186	27	0.56	Mlig455_067776, Mlig455_068918	Neo: - Age: -	THAP8	0.969	-	-	-	-	-	0.969	Mlig455_067776 {REF} {Length: 2609} {Pfam: THAP domain [PF05485.14, score=33.7]} {Human: ENSG00000161277, THAP8, THAP domain containing 8, [Score=49.3, Expect=9e-07]} {Mouse: ENSMUSG00000026279, Thap4, THAP domain containing 4, [Score=46.6, Expect=6e-06]} {RNA1310_48228} {RNA815_37322} Mlig455_068918 {REF} {Length: 411} {NoTransDecoderORF} {RNA1310_87937} {RNA815_47786}
6.	MligTC455_09840	420	8.75	Mlig455_050348, Mlig455_050362	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.191	BCO2	0.965	-	-	0.965	-	-	-	Mlig455_050348 {REF} {Length: 3061} {Pfam: Retinal pigment epithelial membrane protein [PF03055.17, score=236.4]} {Human: ENSG00000197580, BCO2, beta-carotene oxygenase 2, [Score=110, Expect=2e-25]; ENSG00000135697, BCO1, beta-carotene oxygenase 1, [Score=106, Expect=9e-24]} {Mouse: ENSMUSG00000032066, Bco2, beta-carotene oxygenase 2, [Score=97.8, Expect=4e-21]; ENSMUSG00000028174, Rpe65, retinal pigment epithelium 65, [Score=97.1, Expect=7e-21]; ENSMUSG00000031845, Bco1, beta-carotene oxygenase 1, [Score=95.5, Expect=3e-20]} {Smed: dd_Smed_v6_4523_0_1, dd_Smed_v6_4523_0_1, [Score=67.4, Expect=9e-12]} {RNA1509_30736} {RNA1310_9061, RNA1509_30736} {RNA1509_30736, RNA815_3886} Mlig455_050362 {REF} {Length: 2942} {Pfam: Retinal pigment epithelial membrane protein [PF03055.17, score=236.4]} {Human: ENSG00000197580, BCO2, beta-carotene oxygenase 2, [Score=110, Expect=2e-25]; ENSG00000135697, BCO1, beta-carotene oxygenase 1, [Score=106, Expect=9e-24]} {Mouse: ENSMUSG00000032066, Bco2, beta-carotene oxygenase 2, [Score=97.8, Expect=4e-21]; ENSMUSG00000028174, Rpe65, retinal pigment epithelium 65, [Score=97.1, Expect=7e-21]; ENSMUSG00000031845, Bco1, beta-carotene oxygenase 1, [Score=95.5, Expect=3e-20]} {Smed: dd_Smed_v6_4523_0_1, dd_Smed_v6_4523_0_1, [Score=67.4, Expect=9e-12]} {RNA1509_30736} {RNA1310_9061} {RNA815_3886}
7.	MligTC455_10406	146	3.04	Mlig455_067861	Neo: - Age: -	RAC1	0.962	-	-	0.962	-	-	-	Mlig455_067861 {REF} {Length: 1384} {Pfam: Ras family [PF00071.24, score=172.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.6]; ADP-ribosylation factor family [PF00025.23, score=31.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=274, Expect=7e-94]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=271, Expect=9e-93]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=274, Expect=5e-94]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=269, Expect=3e-92]} {Dmel: FBgn0010333, Rac1, [Score=270, Expect=6e-93]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=271, Expect=3e-93]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=258, Expect=4e-88]} {RNA1310_27386.1} {RNA815_17940}
8.	MligTC455_43348	323	6.73	Mlig455_017642, Mlig455_037289, Mlig455_037326	Neo: Int S/G2/M Age: Down-Up-Down		0.96	-	-	0.960	-	-	-	Mlig455_017642 {REF} {Length: 688} {RNA1509_36083, RNA1509_47371} {RNA1310_70069.2, RNA1509_36083, RNA1509_47371} {RNA1509_36083, RNA1509_47371, RNA815_50181} Mlig455_037289 {REF} {Length: 1590} {RNA1509_47371} {RNA1310_70069.2} {RNA815_39015} Mlig455_037326 {REF} {Length: 1097} {RNA1509_47371} {RNA1310_70069.2} {RNA815_50181}
9.	MligTC455_18171	108	2.25	Mlig455_034306, Mlig455_067304, Mlig455_067320	Neo: - Age: Down-Up-Down Region-enriched R2: 4.816/0.02161 Regeneration-upregulated BL: 6.953 Regeneration-enriched BL: 6.953		0.959	-	-	-	-	-	0.959	Mlig455_034306 {REF} {Length: 840} {TRANSSPLICED} {RNA1310_58083} {RNA815_58789} Mlig455_067304 {REF} {Length: 733} {TRANSSPLICED} {RNA1310_58083} {RNA815_58789} Mlig455_067320 {REF} {Length: 454} {RNA1310_58083} {RNA815_58789}
10.	MligTC455_43246	236	4.91	Mlig455_040249	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.595		0.955	-	-	0.955	-	-	-	Mlig455_040249 {REF} {Length: 3468} {TRANSSPLICED} {Celegans: WBGene00018026, F35A5.4, [Score=81.3, Expect=2e-16]} {RNA1509_33968} {RNA1310_10002.1} {RNA815_6021}
11.	MligTC455_09958	142	2.96	Mlig455_013067	Neo: - Age: - Region-enriched R4: 4.107/0.03419	SLC5A8	0.95	-	-	-	-	-	0.950	Mlig455_013067 {REF} {Length: 3653} {Pfam: Sodium:solute symporter family [PF00474.19, score=121.3]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=318, Expect=1e-99]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=318, Expect=1e-99]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=319, Expect=3e-100]} {Dmel: FBgn0034494, CG10444, [Score=280, Expect=1e-85]} {Celegans: WBGene00014092, ZK822.5, [Score=218, Expect=2e-62]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=258, Expect=1e-77]} {RNA1509_54739} {RNA1310_11168} {RNA815_11120.1}

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