Data search
Results for MligTC455_33800
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33800 | 1332 | 27.75 | Mlig455_031087 | Neo: Int S/G2/M Age: logFC(26M/2M)=2.511 Region-enriched R4: 1.316/0.00677 |
YBX3 | Mlig455_031087 {REF} {Length: 1694} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=93.0]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [Score=147, Expect=7e-42]; ENSG00000006047, YBX2, Y-box binding protein 2, [Score=144, Expect=2e-40]; ENSG00000065978, YBX1, Y-box binding protein 1, [Score=142, Expect=1e-39]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [Score=146, Expect=1e-41]; ENSMUSG00000028639, Ybx1, Y box protein 1, [Score=141, Expect=1e-39]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [Score=137, Expect=3e-38]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [Score=133, Expect=6e-38]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=149, Expect=1e-42]} {RNA1509_2399} {RNA1310_28473} {RNA815_36735} |
Cumulative graph for MligTC455_33800
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.392 | 4.972 | 0.66729 | 1.00000 | |
| RegionR2 | -0.355 | 4.972 | 0.38422 | 0.77919 | |
| RegionR3 | 0.109 | 4.972 | 0.74083 | 1.00000 | |
| RegionR4 | 1.316 | 4.972 | 0.00058 | 0.00677 | |
| RegionR5 | 1.202 | 4.972 | 0.00005 | 0.00089 | |
| RegionR6 | 0.311 | 4.972 | 0.35733 | 0.94143 | |
| RegionR7 | -0.297 | 4.972 | 0.50196 | 1.00000 | |
| RegionR8 | -1.893 | 4.972 | 0.00508 | 0.12787 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.561 | 4.972 | 0.61581 | 1.00000 | |
| RegenerationR2 | 0.106 | 4.972 | 0.76448 | 0.97801 | |
| RegenerationR3 | 0.229 | 4.972 | 0.54972 | 0.88346 | |
| RegenerationR4 | -0.078 | 4.972 | 0.83684 | 0.99958 | |
| RegenerationR5 | -0.431 | 4.972 | 0.21175 | 0.64580 | |
| RegenerationR6 | 0.211 | 4.972 | 0.57666 | 0.85550 | |
| RegenerationBL | 0.694 | 4.972 | 0.13272 | 0.43418 | |
| RegenerationTP | 0.891 | 4.972 | 0.09820 | 0.48980 |
Genes with expression patterns similar to MligTC455_33800
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33800 | 1332 | 27.75 | Mlig455_031087 | Neo: Int S/G2/M Age: logFC(26M/2M)=2.511 Region-enriched R4: 1.316/0.00677 |
YBX3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031087 {REF} {Length: 1694} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=93.0]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [Score=147, Expect=7e-42]; ENSG00000006047, YBX2, Y-box binding protein 2, [Score=144, Expect=2e-40]; ENSG00000065978, YBX1, Y-box binding protein 1, [Score=142, Expect=1e-39]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [Score=146, Expect=1e-41]; ENSMUSG00000028639, Ybx1, Y box protein 1, [Score=141, Expect=1e-39]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [Score=137, Expect=3e-38]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [Score=133, Expect=6e-38]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=149, Expect=1e-42]} {RNA1509_2399} {RNA1310_28473} {RNA815_36735} |
| 2. | MligTC455_41116 | 1795 | 37.39 | Mlig455_065487 | Neo: Neoblast Age: - Region-enriched R5: 1.066/0.00096 |
MRPL44 | 3.299 | 0.725 | - | - | 0.895 | 0.729 | 0.950 | Mlig455_065487 {REF} {Length: 1356} {TRANSSPLICED} {Human: ENSG00000135900, MRPL44, mitochondrial ribosomal protein L44, [RH, Score=81.6, Expect=1e-16]} {Mouse: ENSMUSG00000026248, Mrpl44, mitochondrial ribosomal protein L44, [RH, Score=83.2, Expect=3e-17]} {Dmel: FBgn0037330, mRpL44, mitochondrial ribosomal protein L44, [RH, Score=116, Expect=3e-29]} {Smed: dd_Smed_v6_6197_0_6, dd_Smed_v6_6197_0_6, [RH, Score=92.4, Expect=6e-21]} {RNA1509_26520, RNA1509_36984} {RNA1310_24729, RNA1509_26520, RNA1509_36984} {RNA1509_26520, RNA1509_36984, RNA815_10641} |
| 3. | MligTC455_50670 | 1021 | 21.27 | Mlig455_026568 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.125/0.03562 |
SF3A2 | 2.518 | - | - | - | 0.951 | 0.762 | 0.805 | Mlig455_026568 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) [PF16835.7, score=127.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.7]; Cactus-binding C-terminus of cactin protein [PF09732.11, score=19.2]} {Human: ENSG00000104897, SF3A2, splicing factor 3a subunit 2, [RH, Score=355, Expect=1e-120]} {Mouse: ENSMUSG00000020211, Sf3a2, splicing factor 3a, subunit 2, [Score=355, Expect=3e-120]} {Dmel: FBgn0036314, Sf3a2, Splicing factor 3a subunit 2, [RH, Score=377, Expect=1e-132]} {Celegans: WBGene00008683, repo-1, REversed POlarity in early embryos, [RH, Score=361, Expect=5e-127]} {Smed: dd_Smed_v6_1788_0_1, dd_Smed_v6_1788_0_1, [RH, Score=372, Expect=5e-130]} {RNA1509_34887, RNA1509_9978} {RNA1310_38332.1, RNA1509_34887} {RNA1509_34887, RNA815_9802} |
| 4. | MligTC455_24708 | 855 | 17.81 | Mlig455_019686 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.526/0.00312 |
1.867 | - | - | - | 0.960 | 0.907 | - | Mlig455_019686 {REF} {Length: 4383} {TRANSSPLICED} {RNA1509_10665, RNA1509_52462} {RNA1310_219, RNA1509_52462} {RNA1509_52462, RNA815_1960} | |
| 5. | MligTC455_24707 | 827 | 17.23 | Mlig455_017148 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 1.517/0.00285 |
1.866 | - | - | - | 0.957 | 0.909 | - | Mlig455_017148 {REF} {Length: 2506} {TRANSSPLICED} {RNA1509_10665, RNA1509_46789} {RNA1310_219, RNA1509_10665, RNA1509_46789} {RNA1509_10665, RNA1509_46789, RNA815_1960} | |
| 6. | MligTC455_39816 | 1716 | 35.75 | Mlig455_033778 | Neo: - Age: - |
G3BP2 | 1.763 | 0.789 | - | - | - | - | 0.974 | Mlig455_033778 {REF} {Length: 2268} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=84.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.0]; RNA recognition motif [PF16367.7, score=20.2]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=130, Expect=1e-32]; ENSG00000145907, G3BP1, G3BP stress granule assembly factor 1, [RH, Score=124, Expect=2e-30]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=130, Expect=1e-32]} {Dmel: FBgn0015778, rin, rasputin, [Score=130, Expect=2e-32]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [RH, Score=65.5, Expect=3e-11]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [Score=132, Expect=2e-34]} {RNA1509_3318, RNA1509_44632} {RNA1310_6247, RNA1509_3318, RNA1509_44632} {RNA1509_3318, RNA1509_44632, RNA815_17026} |
| 7. | MligTC455_49560 | 536 | 11.16 | Mlig455_024828 | Neo: - Age: - Region-enriched R5: 1.774/0.00049 |
DMAC2 | 1.738 | - | - | - | 0.974 | - | 0.764 | Mlig455_024828 {REF} {Length: 1199} {TRANSSPLICED} {Human: ENSG00000105341, DMAC2, distal membrane arm assembly complex 2, [RH, Score=70.9, Expect=1e-13]} {Celegans: WBGene00021815, Y53G8AR.8, [RH, Score=82.8, Expect=1e-17]} {Smed: dd_Smed_v6_4736_0_1, dd_Smed_v6_4736_0_1, [RH, Score=109, Expect=8e-28]} {RNA1509_11705} {RNA1310_26987.1, RNA1509_11705} {RNA1509_11705, RNA815_12711} |
| 8. | MligTC455_47170 | 1532 | 31.92 | Mlig455_052779 | Neo: Int S/G2/M Age: Down-Up-Up |
WTAP | 0.965 | - | - | - | - | - | 0.965 | Mlig455_052779 {REF} {Length: 999} {TRANSSPLICED} {Pfam: WTAP/Mum2p family [PF17098.7, score=136.4]} {Human: ENSG00000146457, WTAP, WT1 associated protein, [Score=140, Expect=7e-39]} {Mouse: ENSMUSG00000060475, Wtap, Wilms tumour 1-associating protein, [Score=140, Expect=4e-39]} {Dmel: FBgn0000662, fl(2)d, female lethal d, [Score=140, Expect=2e-39]} {Smed: dd_Smed_v6_2322_0_4, dd_Smed_v6_2322_0_4, [Score=136, Expect=9e-37]} {RNA1509_18010} {RNA1310_32619.1} {RNA815_11438.1} |
| 9. | MligTC455_44091 | 715 | 14.9 | Mlig455_062506 | Neo: - Age: - |
0.964 | - | - | - | 0.964 | - | - | Mlig455_062506 {REF} {Length: 3043} {TRANSSPLICED} {RNA1509_6174} {RNA1310_5481} {RNA815_11204} | |
| 10. | MligTC455_53271 | 514 | 10.71 | Mlig455_069029 | Neo: - Age: Down-Up-Up |
SF3B4 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_069029 {REF} {Length: 1520} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=134.0]; RNA recognition motif [PF16367.7, score=32.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.3]} {Human: ENSG00000143368, SF3B4, splicing factor 3b subunit 4, [RH, Score=400, Expect=3e-138]} {Mouse: ENSMUSG00000068856, Sf3b4, splicing factor 3b, subunit 4, [RH, Score=401, Expect=2e-138]} {Dmel: FBgn0015818, Spx, Spliceosomal protein on the X, [RH, Score=387, Expect=4e-134]} {Celegans: WBGene00004723, sap-49, Splicing factor 3B subunit 4, [RH, Score=371, Expect=1e-127]} {Smed: dd_Smed_v6_3556_0_1, dd_Smed_v6_3556_0_1, [RH, Score=402, Expect=6e-141]} {RNA1509_11168} {RNA1310_45243, RNA1509_11168} {RNA1509_11168, RNA815_14059.2} |
| 11. | MligTC455_49813 | 1725 | 35.93 | Mlig455_006796, Mlig455_054739 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.922/0.01487 |
HIPK2 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_006796 {REF} {Length: 5306} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=154.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.8]} {Human: ENSG00000064393, HIPK2, homeodomain interacting protein kinase 2, [Score=431, Expect=1e-134]; ENSG00000110422, HIPK3, homeodomain interacting protein kinase 3, [Score=425, Expect=4e-132]; ENSG00000163349, HIPK1, homeodomain interacting protein kinase 1, [Score=424, Expect=4e-132]} {Mouse: ENSMUSG00000061436, Hipk2, homeodomain interacting protein kinase 2, [Score=430, Expect=2e-134]; ENSMUSG00000008730, Hipk1, homeodomain interacting protein kinase 1, [Score=422, Expect=2e-131]; ENSMUSG00000027177, Hipk3, homeodomain interacting protein kinase 3, [Score=419, Expect=4e-130]} {Dmel: FBgn0035142, Hipk, Homeodomain interacting protein kinase, [Score=412, Expect=4e-127]} {Celegans: WBGene00001994, hpk-1, Homeodomain-interacting protein kinase 1, [Score=400, Expect=9e-128]} {Smed: dd_Smed_v6_7724_0_1, dd_Smed_v6_7724_0_1, [Score=464, Expect=2e-153]} {RNA1509_10673, RNA1509_11641} {RNA1310_4965, RNA1509_10673, RNA1509_11641} {RNA1509_10673, RNA1509_11641, RNA815_5951.1} Mlig455_054739 {REF} {Length: 4881} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=154.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.3]} {Human: ENSG00000064393, HIPK2, homeodomain interacting protein kinase 2, [Score=434, Expect=7e-136]; ENSG00000110422, HIPK3, homeodomain interacting protein kinase 3, [Score=428, Expect=2e-133]; ENSG00000163349, HIPK1, homeodomain interacting protein kinase 1, [Score=427, Expect=4e-133]} {Mouse: ENSMUSG00000061436, Hipk2, homeodomain interacting protein kinase 2, [Score=433, Expect=1e-135]; ENSMUSG00000008730, Hipk1, homeodomain interacting protein kinase 1, [Score=426, Expect=2e-132]; ENSMUSG00000027177, Hipk3, homeodomain interacting protein kinase 3, [Score=422, Expect=2e-131]} {Dmel: FBgn0035142, Hipk, Homeodomain interacting protein kinase, [Score=416, Expect=1e-128]} {Celegans: WBGene00001994, hpk-1, Homeodomain-interacting protein kinase 1, [Score=404, Expect=2e-129]} {Smed: dd_Smed_v6_7724_0_1, dd_Smed_v6_7724_0_1, [Score=462, Expect=7e-153]} {RNA1509_11641} {RNA1310_4965} {RNA815_5951.1} |
| 12. | MligTC455_48751 | 2329 | 48.52 | Mlig455_013744 | Neo: Int S/G2/M Age: - |
NAT10 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_013744 {REF} {Length: 3315} {TRANSSPLICED} {Pfam: GNAT acetyltransferase 2 [PF13718.8, score=306.7]; Helicase [PF05127.16, score=192.4]; Possible tRNA binding domain [PF13725.8, score=150.4]; Domain of unknown function (DUF1726) [PF08351.13, score=111.6]} {Human: ENSG00000135372, NAT10, N-acetyltransferase 10, [RH, Score=966, Expect=0.0]} {Mouse: ENSMUSG00000027185, Nat10, N-acetyltransferase 10, [RH, Score=957, Expect=0.0]} {Dmel: FBgn0027330, l(1)G0020, lethal (1) G0020, [RH, Score=876, Expect=0.0]} {Celegans: WBGene00018866, nath-10, RNA cytidine acetyltransferase, [RH, Score=854, Expect=0.0]} {Smed: dd_Smed_v6_10566_0_1, dd_Smed_v6_10566_0_1, [RH, Score=619, Expect=0.0]} {RNA1509_31593, RNA1509_44132, RNA1509_6732} {RNA1310_3627.1, RNA1509_31593, RNA1509_44132, RNA1509_6732} {RNA1509_31593, RNA1509_44132, RNA1509_6732, RNA815_1182} |
| 13. | MligTC455_09399 | 1048 | 21.83 | Mlig455_028623, Mlig455_028647 | Neo: - |
GNPTAB | 0.951 | - | - | - | - | - | 0.951 | Mlig455_028623 {REF} {Length: 4789} {Pfam: Stealth protein CR2, conserved region 2 [PF11380.10, score=160.8]; Stealth protein CR4, conserved region 4 [PF17103.7, score=56.6]; Stealth protein CR3, conserved region 3 [PF17102.7, score=51.1]; LNR domain [PF00066.19, score=44.0]; Stealth protein CR1, conserved region 1 [PF17101.7, score=39.7]} {Human: ENSG00000111670, GNPTAB, N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, [RH, Score=291, Expect=2e-81]} {Mouse: ENSMUSG00000035311, Gnptab, N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits, [RH, Score=274, Expect=6e-76]} {Dmel: FBgn0033392, CG8027, [RH, Score=201, Expect=6e-54]} {Smed: dd_Smed_v6_6309_0_1, dd_Smed_v6_6309_0_1, [RH, Score=245, Expect=3e-67]} {RNA1509_31005} {RNA1310_13459} {RNA815_4778} Mlig455_028647 {REF} {Length: 4932} {TRANSSPLICED} {Pfam: Stealth protein CR2, conserved region 2 [PF11380.10, score=160.6]; Stealth protein CR4, conserved region 4 [PF17103.7, score=56.5]; Stealth protein CR3, conserved region 3 [PF17102.7, score=51.0]; LNR domain [PF00066.19, score=43.9]; Stealth protein CR1, conserved region 1 [PF17101.7, score=39.6]} {Human: ENSG00000111670, GNPTAB, N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, [RH, Score=295, Expect=1e-82]} {Mouse: ENSMUSG00000035311, Gnptab, N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits, [RH, Score=274, Expect=9e-76]} {Dmel: FBgn0033392, CG8027, [RH, Score=201, Expect=7e-54]} {Smed: dd_Smed_v6_6309_0_1, dd_Smed_v6_6309_0_1, [RH, Score=246, Expect=3e-67]} {RNA1509_31005} {RNA1310_13459} {RNA815_4778} |
| 14. | MligTC455_27974 | 8757 | 182.44 | Mlig455_008999 | Neo: Int S/G2/M Age: Down-Up-Up |
RPS5 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_008999 {REF} {Length: 793} {TRANSSPLICED} {Pfam: Ribosomal protein S7p/S5e [PF00177.23, score=121.9]} {Human: ENSG00000083845, RPS5, ribosomal protein S5, [RH, Score=345, Expect=3e-122]} {Mouse: ENSMUSG00000012848, Rps5, ribosomal protein S5, [RH, Score=345, Expect=2e-122]} {Dmel: FBgn0002590, RpS5a, Ribosomal protein S5a, [RH, Score=347, Expect=3e-123]} {Celegans: WBGene00004474, rps-5, 40S ribosomal protein S5, [RH, Score=340, Expect=2e-120]} {Smed: dd_Smed_v6_295_0_1, dd_Smed_v6_295_0_1, [RH, Score=299, Expect=9e-105]} {RNA1509_652} {RNA1310_26040.1} {RNA815_18520.2} |
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