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Results for MligTC455_33822

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33822 2368 49.34 Mlig455_055482

Neo: -

Age: -

 YIPF4 Mlig455_055482 {REF} {Length: 2246} {Pfam: Yip1 domain [PF04893.19, score=42.0]} {Human: ENSG00000119820, YIPF4, Yip1 domain family member 4, [RH, Score=257, Expect=4e-86]} {Mouse: ENSMUSG00000024072, Yipf4, Yip1 domain family, member 4, [RH, Score=253, Expect=6e-85]} {Dmel: FBgn0032465, CG12404, [Score=64.7, Expect=3e-12]} {Celegans: WBGene00013365, Y60A3A.19, [RH, Score=242, Expect=1e-80]} {Smed: dd_Smed_v6_2945_0_1, dd_Smed_v6_2945_0_1, [RH, Score=276, Expect=4e-94]} {RNA1509_6133} {RNA1310_17902} {RNA815_10730}

Cumulative graph for MligTC455_33822

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.023 5.806 0.08757 0.63964
RegionR2 0.083 5.806 0.74120 1.00000
RegionR3 -0.016 5.806 0.93845 1.00000
RegionR4 -0.04 5.806 0.86446 1.00000
RegionR5 0.56 5.806 0.00264 0.02152
RegionR6 0.178 5.806 0.40352 0.97431
RegionR7 0.18 5.806 0.49932 1.00000
RegionR8 0.079 5.806 0.81130 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.063 5.806 0.94158 1.00000
RegenerationR2 0.043 5.806 0.83942 1.00000
RegenerationR3 0.194 5.806 0.40619 0.80672
RegenerationR4 0.244 5.806 0.28623 0.73125
RegenerationR5 -0.218 5.806 0.30312 0.73045
RegenerationR6 -0.108 5.806 0.65157 0.89930
RegenerationBL -0.421 5.806 0.13771 0.44262
RegenerationTP 0.368 5.806 0.19307 0.63153


Genes with expression patterns similar to MligTC455_33822

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33822 2368 49.34 Mlig455_055482

Neo: -

Age: -

 YIPF4 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_055482 {REF} {Length: 2246} {Pfam: Yip1 domain [PF04893.19, score=42.0]} {Human: ENSG00000119820, YIPF4, Yip1 domain family member 4, [RH, Score=257, Expect=4e-86]} {Mouse: ENSMUSG00000024072, Yipf4, Yip1 domain family, member 4, [RH, Score=253, Expect=6e-85]} {Dmel: FBgn0032465, CG12404, [Score=64.7, Expect=3e-12]} {Celegans: WBGene00013365, Y60A3A.19, [RH, Score=242, Expect=1e-80]} {Smed: dd_Smed_v6_2945_0_1, dd_Smed_v6_2945_0_1, [RH, Score=276, Expect=4e-94]} {RNA1509_6133} {RNA1310_17902} {RNA815_10730}
2. MligTC455_25353 9033 188.19 Mlig455_007868, Mlig455_021140

Neo: -

Age: Down-Up-Up

 HIST4H4 1.791 - - - 0.976 - 0.815

Mlig455_007868 {REF} {Length: 1216} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_3012} {RNA1310_36467} {RNA815_18705}

Mlig455_021140 {REF} {Length: 3267} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_1791, RNA1509_22069, RNA1509_22555, RNA1509_3012} {RNA1310_36467, RNA1509_1791, RNA1509_22069, RNA1509_22555, RNA1509_3012} {RNA1509_1791, RNA1509_22069, RNA1509_22555, RNA1509_3012, RNA815_18705}
3. MligTC455_33988 1979 41.23 Mlig455_045704, Mlig455_071013

Neo: -

Age: logFC(26M/2M)=0.180

Region-enriched R4: 1.265/0.01143

 NR1D1 0.956 - - - 0.956 - -

Mlig455_045704 {REF} {Length: 6440} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=57.2]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=31.9]} {Human: ENSG00000126368, NR1D1, nuclear receptor subfamily 1 group D member 1, [Score=83.6, Expect=7e-16]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=80.1, Expect=1e-14]; ENSG00000186951, PPARA, peroxisome proliferator activated receptor alpha, [Score=79.7, Expect=7e-15]} {Mouse: ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=82.0, Expect=2e-15]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=80.1, Expect=5e-15]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=79.0, Expect=9e-15]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [Score=85.1, Expect=2e-16]} {Celegans: WBGene00003675, nhr-85, Nuclear hormone receptor family member nhr-85, [Score=82.4, Expect=5e-16]} {Smed: dd_Smed_v6_9282_0_3, dd_Smed_v6_9282_0_3, [Score=87.8, Expect=1e-17]} {RNA1509_22493, RNA1509_37329, RNA1509_42225, RNA1509_50222} {RNA1310_2053, RNA1509_22493, RNA1509_37329, RNA1509_42225} {RNA1509_22493, RNA1509_37329, RNA1509_42225, RNA815_4459}

Mlig455_071013 {REF} {Length: 6285} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=57.2]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=31.8]} {Human: ENSG00000126368, NR1D1, nuclear receptor subfamily 1 group D member 1, [Score=83.6, Expect=7e-16]; ENSG00000186951, PPARA, peroxisome proliferator activated receptor alpha, [Score=80.1, Expect=7e-15]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=79.7, Expect=1e-14]} {Mouse: ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=82.0, Expect=2e-15]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=80.1, Expect=5e-15]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=79.0, Expect=9e-15]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [Score=85.1, Expect=2e-16]} {Celegans: WBGene00003675, nhr-85, Nuclear hormone receptor family member nhr-85, [Score=82.4, Expect=5e-16]} {Smed: dd_Smed_v6_9282_0_1, dd_Smed_v6_9282_0_1, [Score=87.8, Expect=1e-17]} {RNA1509_26206, RNA1509_3297, RNA1509_50222} {RNA1310_2053, RNA1509_26206, RNA1509_3297, RNA1509_50222} {RNA1509_26206, RNA1509_3297, RNA1509_50222, RNA815_4459}

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